prot_H-paniculata_contig21664.5721.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig21664.5721.1
Unique Nameprot_H-paniculata_contig21664.5721.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length96
Homology
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BLAST of mRNA_H-paniculata_contig21664.5721.1 vs. uniprot
Match: A0A6H5L4R6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4R6_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 2.430e-37
Identity = 58/90 (64.44%), Postives = 68/90 (75.56%), Query Frame = 0 
Query:    5 GTPFSLVETPIHTAGMQIATIDGLCFDGRRFRRCNDGDPTLRWGVGIDFRKTEPSRFLFSFFDQEQCAVRDGEEATQGEALGTRRYTWIW 94
            GT   +VETPIH AGMQIAT+D  CFDG RFR CNDGDPTLRWG+G+DFR TEPSR LF FFD+E+CAVR+G+ A +G+        W W
Sbjct:  149 GTALEVVETPIHVAGMQIATVDDYCFDGARFRTCNDGDPTLRWGIGMDFRSTEPSRNLFYFFDREKCAVREGQTARKGDCKNKGAARWGW 238
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BLAST of mRNA_H-paniculata_contig21664.5721.1 vs. uniprot
Match: D8LIW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIW7_ECTSI)

HSP 1 Score: 115 bits (289), Expect = 3.470e-31
Identity = 50/75 (66.67%), Postives = 56/75 (74.67%), Query Frame = 0 
Query:   20 MQIATIDGLCFDGRRFRRCNDGDPTLRWGVGIDFRKTEPSRFLFSFFDQEQCAVRDGEEATQGEALGTRRYTWIW 94
            MQIAT D  CFDG RFR CNDGDPTLRWG+GIDFR TEPSR LF FFD+E+CAVR+GE A +G+        W W
Sbjct:    1 MQIATADDYCFDGARFRTCNDGDPTLRWGIGIDFRSTEPSRNLFYFFDREKCAVREGETARKGDCKNKGAARWGW 75
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21664.5721.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L4R6_9PHAE2.430e-3764.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIW7_ECTSI3.470e-3166.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig21664contigH-paniculata_contig21664:3453..4134 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig21664.5721.1mRNA_H-paniculata_contig21664.5721.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig21664 3453..4134 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig21664.5721.1 ID=prot_H-paniculata_contig21664.5721.1|Name=mRNA_H-paniculata_contig21664.5721.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=96bp
LCKQGTPFSLVETPIHTAGMQIATIDGLCFDGRRFRRCNDGDPTLRWGVG
IDFRKTEPSRFLFSFFDQEQCAVRDGEEATQGEALGTRRYTWIWI*
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