prot_H-paniculata_contig2155.5685.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2155.5685.1
Unique Nameprot_H-paniculata_contig2155.5685.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length431
Homology
BLAST of mRNA_H-paniculata_contig2155.5685.1 vs. uniprot
Match: D7FSW0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSW0_ECTSI)

HSP 1 Score: 516 bits (1330), Expect = 1.560e-179
Identity = 274/438 (62.56%), Postives = 315/438 (71.92%), Query Frame = 0
Query:    2 ATFEELTSRNIENCFNEKHRHRRLLGHQARTFDFQFHPTENCALSASEDGTARIWDLDTGRCIKSLDGHSKKHEVLRTCWAPPEAAASSVMVATGSADGTVRLWGIPPPRNDSAPEKGGKTSLLSRCAALTVVGQLRHRDQAKGLDGQVYSCQFVTDNGGAAATGXXXXXXXXXXXXXASYGGLRLLTASDCSVHLWDVETRKRIASQALSKVGNYSIGGKRNPADLCYVFDAKPRPGSGSSTLAVALSDGTVRVGDILGGSEQTIALRRESSANTHLTGLNWSEDGLVLASCGGDGTVTVWDARMWTPRAVLRGHSRPVYGACFFPSTAGRGGEEP----------AEDNTPQLLLSWSSDETLCAWDAARACGVETRPLVTLSVEEGFPIYHCSVSMDGRRLAMAGGGGGGTS--FVGVPIKVVELNQPDDAAAVD 427
             TFEE  S  +  CFN+K  HRRL+GH+ARTFDFQFHPTE+ A+SASEDGTAR+WDL +G+C KSL+GH+KKHEVLR CWAPP AA  SV VATGSADG VRLWGI     D   EK G    + R  +L VVGQLRHR++AKGLDGQVYSC F+ D  G A                +S   + LLTASD SVHLWDVETRKR++S+ALSKVG +SIGG+RNP DL +VFDAKPRPGSGSS LAVALSDGTVRVGD+L   E+   LR     +THLT L WS+DG VLASCGG+GT+TVWD R WT R+VL GHSRPVYGA F+ S AG G               +D  PQLLLSWSSDET+CAWD  RA G  T PL TLSVEEGFP+Y CSVS DGRR A+AGGGG   S  F+GVPIK+V+L+  D+A A D
Sbjct:    4 TTFEERKSVALAACFNDKRCHRRLIGHRARTFDFQFHPTEDAAISASEDGTARVWDLSSGKCAKSLEGHNKKHEVLRACWAPPGAANDSVSVATGSADGIVRLWGIR--HGDGRDEKSG----VDRYQSLKVVGQLRHRNEAKGLDGQVYSCHFIPDPSGGAPP--------------SSAAAMCLLTASDSSVHLWDVETRKRVSSRALSKVGAHSIGGERNPDDLAFVFDAKPRPGSGSSVLAVALSDGTVRVGDVLQQGEKAAVLR--GVTDTHLTSLAWSDDGTVLASCGGNGTITVWDTRTWTARSVLWGHSRPVYGAAFY-SCAGNGXXXXXXXXXXXXXXGQDCPPQLLLSWSSDETVCAWDTGRATGDATAPLATLSVEEGFPVYSCSVSADGRRFALAGGGGDEKSAGFLGVPIKLVDLS--DEARAKD 416          
BLAST of mRNA_H-paniculata_contig2155.5685.1 vs. uniprot
Match: A0A7S4E2U9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E2U9_9STRA)

HSP 1 Score: 123 bits (309), Expect = 5.880e-28
Identity = 123/401 (30.67%), Postives = 167/401 (41.65%), Query Frame = 0
Query:   16 FNEKHRHRRLLGHQARTFDFQFHPTENCALSASEDGTARIWDLDTGRCIKSLDGHSKKHEVLRTCWAPP--EAAASSVMVATGSADGTVRLWGIPPPRND--SAPEKGGKTSLLSRCAALTVVGQLRHRDQAKGLDGQVYSCQFVTDNGGAAATGXXXXXXXXXXXXXASYGGLRLLTASDCSVHLWDVETRKRIASQALSKVGNYSIGGKRNPADLCYVFDAKPRPGSGS----STLAVALSDGTVRVGDILGGSEQTIALRRESSANTHLTGLNWSEDGLVLASCGGDGTVTVWDARMWTPRAVLRG-HSRPVYGAC----FFPSTAGRGGEEPAEDNTPQLLLSWSSDETLCAWDAARACGVETRPLVTLSVEEGFPIYHCSVSMDGRRLAMAGGGGG 403
            +N   + R   GH  R FD        C ++ASEDGTA++W L  GR    +     K EVLR  WAPP    AA + ++A   ADG   LW     R D  SAP+                + +L H     G D QVY C +       +A G              +YG   LLTA+  +V  WDV   K I      K  +Y    +    D  YVFD +P P        +T+A A+SDGT RV D+    +  +     +  ++ +T + W   G  +ASC GDG   VWDAR W     L+G H+ P YGA     F  S A  G            L  WS ++ L   DA +     T P +T +     P++ C+ S     +    GG G
Sbjct:    7 YNINAKQREFAGHTGRVFDVDLGQDGLC-VTASEDGTAKVWRLADGRLEGEVAQSQTKDEVLRVAWAPPIVRDAAGASLLAVAGADGFCNLW-----RGDDWSAPKS---------------LQRLDH-----GGD-QVYGCAW-------SACGD-------------AYGAW-LLTAAGAAVRTWDVNAGKSI------KQWSY----QEPRGDQAYVFDVQPAPRDADDALRATIACAVSDGTARVRDVRLDYDARVL---RAPGDSKVTAVGWL-GGTAVASCYGDGCCRVWDARTWKLLGRLKGAHASPCYGAAKTDGFVASWAAEG------------LAFWSCEDALRKADATKKA---TAP-ITDAAGNAVPLFQCAFSSSNIVVCGGAGGKG 329          
BLAST of mRNA_H-paniculata_contig2155.5685.1 vs. uniprot
Match: A0A433PTA0_9FUNG (WD40-repeat-containing domain protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PTA0_9FUNG)

HSP 1 Score: 68.9 bits (167), Expect = 3.040e-10
Identity = 37/85 (43.53%), Postives = 51/85 (60.00%), Query Frame = 0
Query:   21 RHRRLLGHQARTFDFQFHPTENCALSASEDGTARIWDLDTGRCIKSLDGHSKKHEVLRTCWAPPEAAASSVMVATGSADGTVRLW 105
            RH+R+ GH        FHP+    LSAS+D T +IWDL TGRC+K+L+ H+     +  C       A+S +VATGS D TV++W
Sbjct:   82 RHQRV-GHDNWVRGLVFHPSGKFLLSASDDKTLKIWDLKTGRCMKTLEAHAHFVTCISYC-------AASPVVATGSVDQTVKIW 158          
BLAST of mRNA_H-paniculata_contig2155.5685.1 vs. uniprot
Match: A0A433Q2D3_9FUNG (Nuclear distribution protein PAC1 n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433Q2D3_9FUNG)

HSP 1 Score: 66.6 bits (161), Expect = 3.020e-8
Identity = 37/92 (40.22%), Postives = 51/92 (55.43%), Query Frame = 0
Query:   20 HRHR------RLLGHQARTFDFQFHPTENCALSASEDGTARIWDLDTGRCIKSLDGHSKKHEVLRTCWAPPEAAASSVMVATGSADGTVRLW 105
            HRHR      + +GH        FHP+    LSAS+D T +IWDL TGR +K+L+ H+     +  C       A+S +VATGS D TV++W
Sbjct:  342 HRHRVERQDHQAIGHDNWVRGLVFHPSGKFLLSASDDKTLKIWDLKTGRAMKTLEAHAHFVTCISYC-------AASPVVATGSVDQTVKIW 426          
BLAST of mRNA_H-paniculata_contig2155.5685.1 vs. uniprot
Match: A0A1X2IB45_9FUNG (WD40-repeat-containing domain protein n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2IB45_9FUNG)

HSP 1 Score: 58.5 bits (140), Expect = 5.840e-6
Identity = 42/125 (33.60%), Postives = 54/125 (43.20%), Query Frame = 0
Query:   25 LLGHQARTFDFQFHP-TENCALSASEDGTARIWDLDTGRCIKSLDGHSKKHEVLRTCWAPPEAAASSVMVATGSADGTVRLWGIPP-------PRNDSAPEKGGKTSLLSRCAALTVVGQLRHRD 141
            L GH  R  D Q HP  +N  LS S+DGT R+WDL T RCI   D     ++    C+ P     S     TG+A G  R W IP          ND        + LL +    + +G+   RD
Sbjct:  157 LKGHTKRILDIQSHPQNDNNILSVSKDGTVRLWDLKTHRCIVMFD-----YDCNVACFHP-----SGKTFITGTAKGEFRDWTIPAYMLPMDDDENDIMTIGKSNSRLLKKMHGESTIGKYTKRD 271          
BLAST of mRNA_H-paniculata_contig2155.5685.1 vs. uniprot
Match: A0A418EMT1_9STRA (Utp13 domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418EMT1_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 4.190e-5
Identity = 34/108 (31.48%), Postives = 51/108 (47.22%), Query Frame = 0
Query:   25 LLGHQARTFDFQFHPTENCALSASEDGTARIWDLDTGRCIKSLDGHSKKHEVLRTCWAPPEAAASSVMVATGSADGTVRLWGIPPPRNDSAPEKGGKTSLLSRCAALT 132
            L GH          P     +SAS+DGTAR+WDL T RC+    GH++    +         A+ S    TGS+D T++LW +   R+ ++P     ++     AA T
Sbjct:   11 LAGHADIVMALAVSPDGKWLVSASKDGTARVWDLVTLRCVAVGAGHAESLGSIAVSQKLHSYASGSAFFVTGSSDKTMKLWHLA--RSSASPSSSLTSTXXLSAAAAT 116          
BLAST of mRNA_H-paniculata_contig2155.5685.1 vs. uniprot
Match: A0A3L6UXN9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6UXN9_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 4.370e-5
Identity = 34/108 (31.48%), Postives = 51/108 (47.22%), Query Frame = 0
Query:   25 LLGHQARTFDFQFHPTENCALSASEDGTARIWDLDTGRCIKSLDGHSKKHEVLRTCWAPPEAAASSVMVATGSADGTVRLWGIPPPRNDSAPEKGGKTSLLSRCAALT 132
            L GH          P     +SAS+DGTAR+WDL T RC+    GH++    +         A+ S    TGS+D T++LW +   R+ ++P     ++     AA T
Sbjct:  310 LAGHADIVMALAVSPDGKWLVSASKDGTARVWDLVTLRCVAVGAGHAESLGSIAVSQKLHSYASGSAFFVTGSSDKTMKLWHLA--RSSASPSSSLTSTXXLSAAAAT 415          
BLAST of mRNA_H-paniculata_contig2155.5685.1 vs. uniprot
Match: A0A3R7AF29_9STRA (ANAPC4_WD40 domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7AF29_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 4.440e-5
Identity = 36/106 (33.96%), Postives = 49/106 (46.23%), Query Frame = 0
Query:   25 LLGHQARTFDFQFHPTENCALSASEDGTARIWDLDTGRCIKSLDGHSKKHEVLRTCWAPPEAAASSVMVATGSADGTVRLWGIPPPRNDSAPEKGGKTSLLSRCAA 130
            L GH          P     +SAS+DGTAR+WDL T RC+    GH++    +         A+ S    TGS+D T++LW +      SA      T+ LS  AA
Sbjct:  397 LAGHADIVMALAVSPDGKWLVSASKDGTARVWDLVTLRCVAVGAGHAESLGSIAVSQKLHSYASGSAFFVTGSSDKTMKLWHL---ARASALPSSSLTTTLSAAAA 499          
BLAST of mRNA_H-paniculata_contig2155.5685.1 vs. uniprot
Match: A0A813TAB1_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A813TAB1_9BILA)

HSP 1 Score: 57.4 bits (137), Expect = 4.980e-5
Identity = 32/87 (36.78%), Postives = 47/87 (54.02%), Query Frame = 0
Query:   28 HQARTFDFQFHPTENCALSASEDGTARIWDLDTGRCIKSLDGHSKKHEVLRTCWAPPEAAASSVMVATGSADGTVRLWGIPPPRNDS 114
            H+ R  D +  P +   +SAS DGTA++WD +T   I  L GH  K E+   C       +++ +VATGS D T+ LW +   +N S
Sbjct: 2557 HRDRITDVKLSPDKQFLVSASADGTAKVWDANTKELISKLTGH--KREITCAC------ISTNQLVATGSKDQTICLWRLQTGQNAS 2635          
BLAST of mRNA_H-paniculata_contig2155.5685.1 vs. uniprot
Match: A0A179F2F5_METCM (WD-repeat protein n=2 Tax=Metacordyceps chlamydosporia TaxID=280754 RepID=A0A179F2F5_METCM)

HSP 1 Score: 56.6 bits (135), Expect = 6.330e-5
Identity = 29/85 (34.12%), Postives = 43/85 (50.59%), Query Frame = 0
Query:   23 RRLLGHQARTFDFQFHPTENCALSASEDGTARIWDLDTGRCIKSLDGHSKKHEVLRTCWAPPEAAASSVMVATGSADGTVRLWGI 107
            R+L  H+       F       ++A+ D T ++WDL+ GRCI  LDGH+     L+             ++ATGSAD T+RLW +
Sbjct:  296 RQLRAHKDTVTAIDFDAPFGTMVTAALDDTVKVWDLNAGRCIGLLDGHTASVRTLQV---------EDNILATGSADATIRLWDL 371          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2155.5685.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7FSW0_ECTSI1.560e-17962.56Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S4E2U9_9STRA5.880e-2830.67Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A433PTA0_9FUNG3.040e-1043.53WD40-repeat-containing domain protein n=1 Tax=Endo... [more]
A0A433Q2D3_9FUNG3.020e-840.22Nuclear distribution protein PAC1 n=2 Tax=Jimgerde... [more]
A0A1X2IB45_9FUNG5.840e-633.60WD40-repeat-containing domain protein n=1 Tax=Absi... [more]
A0A418EMT1_9STRA4.190e-531.48Utp13 domain-containing protein n=2 Tax=Aphanomyce... [more]
A0A3L6UXN9_9STRA4.370e-531.48Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A3R7AF29_9STRA4.440e-533.96ANAPC4_WD40 domain-containing protein (Fragment) n... [more]
A0A813TAB1_9BILA4.980e-536.78Hypothetical protein n=1 Tax=Didymodactylos carnos... [more]
A0A179F2F5_METCM6.330e-534.12WD-repeat protein n=2 Tax=Metacordyceps chlamydosp... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 93..107
score: 41.6
coord: 291..305
score: 37.76
coord: 44..58
score: 41.05
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 18..57
e-value: 2.1E-5
score: 34.0
coord: 130..199
e-value: 1.0
score: 16.9
coord: 368..416
e-value: 420.0
score: 0.4
coord: 307..360
e-value: 1.6E-4
score: 31.1
coord: 60..106
e-value: 0.0018
score: 27.6
coord: 266..304
e-value: 3.0E-4
score: 30.1
IPR001680WD40 repeatPFAMPF00400WD40coord: 27..57
e-value: 0.014
score: 16.2
coord: 278..304
e-value: 0.001
score: 19.8
coord: 61..105
e-value: 2.8E-4
score: 21.6
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 25..66
score: 14.251
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 92..105
score: 8.604
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 272..304
score: 10.442
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 11..126
e-value: 1.0E-20
score: 75.7
coord: 127..408
e-value: 1.2E-29
score: 105.1
NoneNo IPR availablePANTHERPTHR19848WD40 REPEAT PROTEINcoord: 187..397
coord: 17..326
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 44..58
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 291..305
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 25..115
score: 16.322
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 272..369
score: 11.761
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 23..402

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2155contigH-paniculata_contig2155:13681..18617 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2155.5685.1mRNA_H-paniculata_contig2155.5685.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2155 13640..19253 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2155.5685.1 ID=prot_H-paniculata_contig2155.5685.1|Name=mRNA_H-paniculata_contig2155.5685.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=431bp
MATFEELTSRNIENCFNEKHRHRRLLGHQARTFDFQFHPTENCALSASED
GTARIWDLDTGRCIKSLDGHSKKHEVLRTCWAPPEAAASSVMVATGSADG
TVRLWGIPPPRNDSAPEKGGKTSLLSRCAALTVVGQLRHRDQAKGLDGQV
YSCQFVTDNGGAAATGATSGAPSSSSSSSASYGGLRLLTASDCSVHLWDV
ETRKRIASQALSKVGNYSIGGKRNPADLCYVFDAKPRPGSGSSTLAVALS
DGTVRVGDILGGSEQTIALRRESSANTHLTGLNWSEDGLVLASCGGDGTV
TVWDARMWTPRAVLRGHSRPVYGACFFPSTAGRGGEEPAEDNTPQLLLSW
SSDETLCAWDAARACGVETRPLVTLSVEEGFPIYHCSVSMDGRRLAMAGG
GGGGTSFVGVPIKVVELNQPDDAAAVDVGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf