mRNA_H-paniculata_contig2155.5685.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2155.5685.1
Unique NamemRNA_H-paniculata_contig2155.5685.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig2155.5685.1 vs. uniprot
Match: D7FSW0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSW0_ECTSI)

HSP 1 Score: 516 bits (1328), Expect = 9.440e-176
Identity = 274/437 (62.70%), Postives = 315/437 (72.08%), Query Frame = 3 
Query:   48 TFEELTSRNIENCFNEKHRHRRLLGHQARTFDFQFHPTENCALSASEDGTARIWDLDTGRCIKSLDGHSKKHEVLRTCWAPPEAAASSVMVATGSADGTVRLWGIPPPRNDSAPEKGGKTSLLSRCAALTVVGQLRHRDQAKGLDGQVYSCQFVTDNGGAAATGXXXXXXXXXXXXXASYGGLRLLTASDCSVHLWDVETRKRIASQALSKVGNYSIGGKRNPADLCYVFDAKPRPGSGSSTLAVALSDGTVRVGDILGGSEQTIALRRESSANTHLTGLNWSEDGLVLASCGGDGTVTVWDARMWTPRAVLRGHSRPVYGACFFPSTAGRGGEEP----------AEDNTPQLLLSWSSDETLCAWDAARACGVETRPLVTLSVEEGFPIYHCSVSMDGRRLAMAGGGGGGTS--FVGVPIKVVELNQPDDAAAVD 1322
            TFEE  S  +  CFN+K  HRRL+GH+ARTFDFQFHPTE+ A+SASEDGTAR+WDL +G+C KSL+GH+KKHEVLR CWAPP AA  SV VATGSADG VRLWGI     D   EK G    + R  +L VVGQLRHR++AKGLDGQVYSC F+ D  G A                +S   + LLTASD SVHLWDVETRKR++S+ALSKVG +SIGG+RNP DL +VFDAKPRPGSGSS LAVALSDGTVRVGD+L   E+   LR     +THLT L WS+DG VLASCGG+GT+TVWD R WT R+VL GHSRPVYGA F+ S AG G               +D  PQLLLSWSSDET+CAWD  RA G  T PL TLSVEEGFP+Y CSVS DGRR A+AGGGG   S  F+GVPIK+V+L+  D+A A D
Sbjct:    5 TFEERKSVALAACFNDKRCHRRLIGHRARTFDFQFHPTEDAAISASEDGTARVWDLSSGKCAKSLEGHNKKHEVLRACWAPPGAANDSVSVATGSADGIVRLWGIR--HGDGRDEKSG----VDRYQSLKVVGQLRHRNEAKGLDGQVYSCHFIPDPSGGAPP--------------SSAAAMCLLTASDSSVHLWDVETRKRVSSRALSKVGAHSIGGERNPDDLAFVFDAKPRPGSGSSVLAVALSDGTVRVGDVLQQGEKAAVLR--GVTDTHLTSLAWSDDGTVLASCGGNGTITVWDTRTWTARSVLWGHSRPVYGAAFY-SCAGNGXXXXXXXXXXXXXXGQDCPPQLLLSWSSDETVCAWDTGRATGDATAPLATLSVEEGFPVYSCSVSADGRRFALAGGGGDEKSAGFLGVPIKLVDLS--DEARAKD 416
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BLAST of mRNA_H-paniculata_contig2155.5685.1 vs. uniprot
Match: A0A835YNR1_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNR1_9STRA)

HSP 1 Score: 218 bits (556), Expect = 1.320e-59
Identity = 181/485 (37.32%), Postives = 230/485 (47.42%), Query Frame = 3 
Query:   87 FNEKHRHRRLLGHQARTFDFQFHPTENC-ALSASEDGTARIWDLDTGRCIKSLDGHSKKHEVLRTCWAPPEAAASSVMVATGSADGTVRLWGIPPPRNDS---APEKGGKTSLLSRCAALTVVGQLRHRDQAKGLDGQVYSCQFVTDNGGAAATGXXXXXXXXXXXXXASYGGL------------RLLTASDCSVHLWDVETRKRIASQALSKVGNYSIGGK-RNPADLCYVFDAKPRPGSGSS-----TLAVALSDGTVRVGDILGGSEQTIALRRESSANT--------------HLTGLNWSEDGLVLASCGGDGTVTVWDARMWTPRAVLRG---------------------------HSRPVYGACFFPSTAGRGGEEPAEDNTPQLLLSWSSDETLCAWDAARAC----GVETRPL--------------VTLSVEE-----GFPIYHCSVSMDGRRLAMAGGGGG--GTSFVGVPI 1277
            + ++ R ++LLGH+ R FDFQFHPT +  A S SEDGT R+WD+  G  I S  G   K EVLR CWAPP      + +A+GSADG VRLW +    + +   AP + G ++   RC     V        A G DGQVY+ QF+  +GG +++G XXXXXXXXXXXX                   L+ A+D +V LWDV T       A S    ++ GG  RNP +  +VFDAK   GSG S     TLA ALSDGTVRV  +      +      S +N+              HLT + W+ DG  LA+CG    V VWDAR WT RA L+                            HSRPVYG  F  S              PQLLLSWSSD TL AWD   A     G +  PL              +T    E      +PI HC+++ D   + +AGG  G  G +  GVP+
Sbjct:   28 WRDQSRRKQLLGHKGRVFDFQFHPTVHSRAASCSEDGTVRVWDVQRGVSIASAKG--SKDEVLRICWAPP--GTPGIDLASGSADGLVRLWAMSAATSTATRGAPGRDGSSAAALRCVKTLDV------KAAAGGDGQVYALQFIGADGGGSSSGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNLMVAADDAVSLWDVGTGVVTRRWAFSSSAQHAHGGAARNPDNQVFVFDAKVCCGSGGSGGGDGTLAAALSDGTVRVQPLDSELPASTLHPCGSGSNSGXXXXXXXXXXXXAHLTAVAWAPDGSALAACGXXXGVEVWDARTWTRRAALQAQALAVSVRERLRCAANTQYGDHLPAAAHSRPVYGVMFCASA-------------PQLLLSWSSDGTLKAWDWGAAANDMNGGDFAPLQQRSTAAQLVDVMRITCQHREVLSSGDYPILHCALARDASSVVVAGGDSGARGAAMTGVPV 489
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BLAST of mRNA_H-paniculata_contig2155.5685.1 vs. uniprot
Match: A0A7S4E2U9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E2U9_9STRA)

HSP 1 Score: 123 bits (309), Expect = 4.830e-27
Identity = 123/401 (30.67%), Postives = 167/401 (41.65%), Query Frame = 3 
Query:   87 FNEKHRHRRLLGHQARTFDFQFHPTENCALSASEDGTARIWDLDTGRCIKSLDGHSKKHEVLRTCWAPP--EAAASSVMVATGSADGTVRLWGIPPPRND--SAPEKGGKTSLLSRCAALTVVGQLRHRDQAKGLDGQVYSCQFVTDNGGAAATGXXXXXXXXXXXXXASYGGLRLLTASDCSVHLWDVETRKRIASQALSKVGNYSIGGKRNPADLCYVFDAKPRPGSGS----STLAVALSDGTVRVGDILGGSEQTIALRRESSANTHLTGLNWSEDGLVLASCGGDGTVTVWDARMWTPRAVLRG-HSRPVYGAC----FFPSTAGRGGEEPAEDNTPQLLLSWSSDETLCAWDAARACGVETRPLVTLSVEEGFPIYHCSVSMDGRRLAMAGGGGG 1250
            +N   + R   GH  R FD        C ++ASEDGTA++W L  GR    +     K EVLR  WAPP    AA + ++A   ADG   LW     R D  SAP+                + +L H     G D QVY C +       +A G              +YG   LLTA+  +V  WDV   K I      K  +Y    +    D  YVFD +P P        +T+A A+SDGT RV D+    +  +     +  ++ +T + W   G  +ASC GDG   VWDAR W     L+G H+ P YGA     F  S A  G            L  WS ++ L   DA +     T P +T +     P++ C+ S     +    GG G
Sbjct:    7 YNINAKQREFAGHTGRVFDVDLGQDGLC-VTASEDGTAKVWRLADGRLEGEVAQSQTKDEVLRVAWAPPIVRDAAGASLLAVAGADGFCNLW-----RGDDWSAPKS---------------LQRLDH-----GGD-QVYGCAW-------SACGD-------------AYGAW-LLTAAGAAVRTWDVNAGKSI------KQWSY----QEPRGDQAYVFDVQPAPRDADDALRATIACAVSDGTARVRDVRLDYDARVL---RAPGDSKVTAVGWL-GGTAVASCYGDGCCRVWDARTWKLLGRLKGAHASPCYGAAKTDGFVASWAAEG------------LAFWSCEDALRKADATKKA---TAP-ITDAAGNAVPLFQCAFSSSNIVVCGGAGGKG 329
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BLAST of mRNA_H-paniculata_contig2155.5685.1 vs. uniprot
Match: A0A433PTA0_9FUNG (WD40-repeat-containing domain protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PTA0_9FUNG)

HSP 1 Score: 68.9 bits (167), Expect = 5.180e-10
Identity = 37/85 (43.53%), Postives = 51/85 (60.00%), Query Frame = 3 
Query:  102 RHRRLLGHQARTFDFQFHPTENCALSASEDGTARIWDLDTGRCIKSLDGHSKKHEVLRTCWAPPEAAASSVMVATGSADGTVRLW 356
            RH+R+ GH        FHP+    LSAS+D T +IWDL TGRC+K+L+ H+     +  C       A+S +VATGS D TV++W
Sbjct:   82 RHQRV-GHDNWVRGLVFHPSGKFLLSASDDKTLKIWDLKTGRCMKTLEAHAHFVTCISYC-------AASPVVATGSVDQTVKIW 158
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BLAST of mRNA_H-paniculata_contig2155.5685.1 vs. uniprot
Match: A0A433Q2D3_9FUNG (Nuclear distribution protein PAC1 n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433Q2D3_9FUNG)

HSP 1 Score: 66.6 bits (161), Expect = 6.580e-8
Identity = 37/92 (40.22%), Postives = 51/92 (55.43%), Query Frame = 3 
Query:   99 HRHR------RLLGHQARTFDFQFHPTENCALSASEDGTARIWDLDTGRCIKSLDGHSKKHEVLRTCWAPPEAAASSVMVATGSADGTVRLW 356
            HRHR      + +GH        FHP+    LSAS+D T +IWDL TGR +K+L+ H+     +  C       A+S +VATGS D TV++W
Sbjct:  342 HRHRVERQDHQAIGHDNWVRGLVFHPSGKFLLSASDDKTLKIWDLKTGRAMKTLEAHAHFVTCISYC-------AASPVVATGSVDQTVKIW 426
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BLAST of mRNA_H-paniculata_contig2155.5685.1 vs. uniprot
Match: A4S8Z8_OSTLU (Uncharacterized protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S8Z8_OSTLU)

HSP 1 Score: 64.7 bits (156), Expect = 2.130e-7
Identity = 80/301 (26.58%), Postives = 107/301 (35.55%), Query Frame = 3 
Query:  117 LGHQARTFDFQFHPTENCALSAS-----------EDGTARIWDLD----TGRCIKSLDGHSKKHEVLRTCWAPPEAAASSVMVATGSADGTVRLWGIPPPRNDSAPEKGGKTSLLSRCAALTVVGQLRHRDQAKGLDGQVYSCQFVTDNGGAAATGXXXXXXXXXXXXXASYGGLRLLTASDCSVHLWDVETRKRIASQALSKVGNYSIGGKRNPADLC--YVFDAKPRPGSGSSTLAVALSDGTVRV-GDILGGSEQTIALRRESSANTHLTGLNWSEDGLVLASCGGDGTVTVWDARMW 965
            + H  R FD  F P    A  +S           ED TAR+  +D    + R + +   H  + EV+R  +     A +S   ATGSADGT ++W                       A   VV + +  D   G  G+VY C F+ D  G                           T S+     WDVE     A  A     +    G R P      Y+F        G   LA   SDG VRV GD   G+         +  N  +   ++ + G VL S G DGTV + D R W
Sbjct:   24 VAHYGRAFDCAFAPWGRRASDSSSAWDEIIVTCGEDATARVHGVDARDASARTLATCRAH--REEVVRVAF-----ARASGRFATGSADGTCKVWDFD--------------------ARERVVREAQSLD---GHPGEVYGCCFLGDGDGGVVA-----------------------TCSETEARAWDVERGTTTAKTAPRD--DLGTSGARTPERWSPGYLFSMA----RGDGVLACGCSDGIVRVYGDGSSGTFGERVAEVTAHPNAIVGSTSFIDGGRVLCSVGLDGTVVLTDVRTW 265
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BLAST of mRNA_H-paniculata_contig2155.5685.1 vs. uniprot
Match: U4LDK7_PYROM (Similar to Ribosome assembly protein 4 acc. no. P25382 n=1 Tax=Pyronema omphalodes (strain CBS 100304) TaxID=1076935 RepID=U4LDK7_PYROM)

HSP 1 Score: 60.8 bits (146), Expect = 5.410e-6
Identity = 35/82 (42.68%), Postives = 45/82 (54.88%), Query Frame = 3 
Query:  114 LLGHQARTFDFQFHPTENCAL-SASEDGTARIWDLDTGRCIKSLDGHSKKHEVLRTCWAPPEAAASSVMVATGSADGTVRLW 356
            + GH        F P  +  + SAS DGTARIWD DT   + +L GH  K+ VL   W+P     +  ++ATGS D TVRLW
Sbjct:  142 IAGHGNAILATSFSPASSSRMVSASGDGTARIWDCDTETPLHTLKGH--KNWVLTASWSP-----NGKLIATGSMDNTVRLW 216
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BLAST of mRNA_H-paniculata_contig2155.5685.1 vs. uniprot
Match: A0A1X2IB45_9FUNG (WD40-repeat-containing domain protein n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2IB45_9FUNG)

HSP 1 Score: 58.5 bits (140), Expect = 1.080e-5
Identity = 42/125 (33.60%), Postives = 54/125 (43.20%), Query Frame = 3 
Query:  114 LLGHQARTFDFQFHP-TENCALSASEDGTARIWDLDTGRCIKSLDGHSKKHEVLRTCWAPPEAAASSVMVATGSADGTVRLWGIPP-------PRNDSAPEKGGKTSLLSRCAALTVVGQLRHRD 464
            L GH  R  D Q HP  +N  LS S+DGT R+WDL T RCI   D     ++    C+ P     S     TG+A G  R W IP          ND        + LL +    + +G+   RD
Sbjct:  157 LKGHTKRILDIQSHPQNDNNILSVSKDGTVRLWDLKTHRCIVMFD-----YDCNVACFHP-----SGKTFITGTAKGEFRDWTIPAYMLPMDDDENDIMTIGKSNSRLLKKMHGESTIGKYTKRD 271
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BLAST of mRNA_H-paniculata_contig2155.5685.1 vs. uniprot
Match: A0A024FXQ7_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FXQ7_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 1.340e-5
Identity = 34/82 (41.46%), Postives = 46/82 (56.10%), Query Frame = 3 
Query:  111 RLLGHQARTFDFQFHPTENCALSASEDGTARIWDLDTGRCIKSLDGHSKKHEVLRTCWAPPEAAASSVMVATGSADGTVRLW 356
            R  GH  R +D  F  T++   +ASEDGT ++W+L  G CI +L GH  K  V R    P     S  ++ATG  DG+V+LW
Sbjct:  254 RAWGHHGRLWDACF--TKSGIATASEDGTCKLWELQKGNCIATLQGHVGKC-VWRVACHP-----SKRLIATGGGDGSVKLW 327
[Close]
BLAST of mRNA_H-paniculata_contig2155.5685.1 vs. uniprot
Match: A8IST2_CHLRE (Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8IST2_CHLRE)

HSP 1 Score: 57.0 bits (136), Expect = 5.940e-5
Identity = 34/84 (40.48%), Postives = 49/84 (58.33%), Query Frame = 3 
Query:  120 GHQARTFDFQFHP-TENCALSASEDGTARIWDLDTG----RCIKSLDGHSKKHEVLRTCWAPPEAAASSVMVATGSADGTVRLW 356
            GH  R FD  FHP  E+  ++ASED + R+W    G    + +++  GH    EVLR  W     +++ ++VA+GSAD TVRLW
Sbjct:   20 GHGERIFDVSFHPLNEDIVVTASEDTSVRMWKRAEGSTMYKQVRAYLGHGG--EVLRAGW-----SSNGMLVASGSADRTVRLW 96
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2155.5685.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D7FSW0_ECTSI9.440e-17662.70Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YNR1_9STRA1.320e-5937.32WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A7S4E2U9_9STRA4.830e-2730.67Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A433PTA0_9FUNG5.180e-1043.53WD40-repeat-containing domain protein n=1 Tax=Endo... [more]
A0A433Q2D3_9FUNG6.580e-840.22Nuclear distribution protein PAC1 n=2 Tax=Jimgerde... [more]
A4S8Z8_OSTLU2.130e-726.58Uncharacterized protein n=1 Tax=Ostreococcus lucim... [more]
U4LDK7_PYROM5.410e-642.68Similar to Ribosome assembly protein 4 acc. no. P2... [more]
A0A1X2IB45_9FUNG1.080e-533.60WD40-repeat-containing domain protein n=1 Tax=Absi... [more]
A0A024FXQ7_9STRA1.340e-541.46Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A8IST2_CHLRE5.940e-540.48Predicted protein (Fragment) n=1 Tax=Chlamydomonas... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2155contigH-paniculata_contig2155:13640..19253 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score517.3
Seed ortholog evalue6.8e-144
Seed eggNOG ortholog2880.D7FSW0
KEGG koko:K01265,ko:K11797
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transcription initiation from RNA polymerase II promoter
EggNOG OGsCOG2319@1,KOG0263@2759
Ec32 ortholog descriptionWD40/YVTN repeat-like-containing domain
Ec32 orthologEc-27_006570.1
EC3.4.11.18
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko04121
Exons2
Model size1970
Cds size1293
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2155.5685.1prot_H-paniculata_contig2155.5685.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2155 13681..18617 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929582.9950917-UTR-H-paniculata_contig2155:13639..136801622929582.9950917-UTR-H-paniculata_contig2155:13639..13680Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2155 13640..13680 +
1691480923.5534678-UTR-H-paniculata_contig2155:13639..136801691480923.5534678-UTR-H-paniculata_contig2155:13639..13680Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2155 13640..13680 +
1622929583.0376735-UTR-H-paniculata_contig2155:18617..192531622929583.0376735-UTR-H-paniculata_contig2155:18617..19253Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2155 18618..19253 +
1691480923.5928712-UTR-H-paniculata_contig2155:18617..192531691480923.5928712-UTR-H-paniculata_contig2155:18617..19253Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2155 18618..19253 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929583.008883-CDS-H-paniculata_contig2155:13680..137881622929583.008883-CDS-H-paniculata_contig2155:13680..13788Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2155 13681..13788 +
1691480923.5661452-CDS-H-paniculata_contig2155:13680..137881691480923.5661452-CDS-H-paniculata_contig2155:13680..13788Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2155 13681..13788 +
1622929583.020302-CDS-H-paniculata_contig2155:17432..186171622929583.020302-CDS-H-paniculata_contig2155:17432..18617Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2155 17433..18617 +
1691480923.5755224-CDS-H-paniculata_contig2155:17432..186171691480923.5755224-CDS-H-paniculata_contig2155:17432..18617Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2155 17433..18617 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2155.5685.1

>prot_H-paniculata_contig2155.5685.1 ID=prot_H-paniculata_contig2155.5685.1|Name=mRNA_H-paniculata_contig2155.5685.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=431bp
MATFEELTSRNIENCFNEKHRHRRLLGHQARTFDFQFHPTENCALSASED
GTARIWDLDTGRCIKSLDGHSKKHEVLRTCWAPPEAAASSVMVATGSADG
TVRLWGIPPPRNDSAPEKGGKTSLLSRCAALTVVGQLRHRDQAKGLDGQV
YSCQFVTDNGGAAATGATSGAPSSSSSSSASYGGLRLLTASDCSVHLWDV
ETRKRIASQALSKVGNYSIGGKRNPADLCYVFDAKPRPGSGSSTLAVALS
DGTVRVGDILGGSEQTIALRRESSANTHLTGLNWSEDGLVLASCGGDGTV
TVWDARMWTPRAVLRGHSRPVYGACFFPSTAGRGGEEPAEDNTPQLLLSW
SSDETLCAWDAARACGVETRPLVTLSVEEGFPIYHCSVSMDGRRLAMAGG
GGGGTSFVGVPIKVVELNQPDDAAAVDVGR*
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mRNA from alignment at H-paniculata_contig2155:13640..19253+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2155.5685.1 ID=mRNA_H-paniculata_contig2155.5685.1|Name=mRNA_H-paniculata_contig2155.5685.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5614bp|location=Sequence derived from alignment at H-paniculata_contig2155:13640..19253+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAAGCTTTGCTGTCAAGGAACGGAGGAGTACCTCGGGCGCTATGGCAACA
TTCGAGGAGCTCACAAGCAGAAATATTGAGAATTGCTTTAATGAAAAACA
TAGACATCGTCGCCTGCTGGGACATCAGGCTCGGACCTTCGACTTTCAGG
TGGCCCTTGTGCACTACGTGGTTGAACTTGGGGCTTTAGTGGAGGCATGC
CAGATGCATAGCCCAGCCATCCATCGCCTCTTTTGTTCTGTTTGCATGTC
TCCTGCTTGGGAATGGCTATGGGGCAGTAAGCCTGAGCTTATCCATGCGT
AAGTCACGTGCGACAGCCCATTCCAGGCAAATGCTATCGGCACGATAATT
TACGAATATAGATACTTGAACATCTTCGCACGTCGGACGGATCAATATCC
GTACGATCCCTAAGGTACCGATCACGATATGTTGGCGAGACATGTACGGA
TAAAACACGGCATACGATCGCTAGTGGAGAAACATGTACGGATAAAACGA
TTTGTAGGTATCGTAGGATCAACAAAAATTGGCCGAAGAGAAACTTTTTA
TCCCCGAAACGCCAGTTATTGCGCTGACGATCCGTACGCGATGACGATCC
GTGAGTACGGATGAATTGCACGGATTTGGGGCAAACGATCCGTAGGGTAG
GGATCAGTATAATGGATCAACTGTGCGGATGGCTTGTGGTGAACATCTAC
TACCGATCCGTAGGGATACGGATTACAGCGCAAATGTACGGATAAAACAT
GGTGTAGGGATGACTTGTGGCAAACATGTGCTACCGTTTCGTACGCTACG
GATCACCAGTGCGGAAGCATGTACGGATCGTACCACAATCTACGGATCAG
ACGATCTACCCGTAAAACTAGCGAGTATGATTCATGTACGATCTGATCTG
TCCGACGTGCCAGCATTTTTGAATACAGCAAGTTGTAAAATTGGGCATCC
CCAAATTCAAAACCCGAGGGGAATGGTTTTTGTGTCTCTTTCGAACAAAG
TAAATTTCACGGATCATGTCGGTAACGGCATTTGAAACTGACAAAATGGG
TATGATTTTTTGCTTTCTCGGTAATTGTTCGATATGTGGTTTTCGGTTTC
CGAGTTTTGCGGTACGGTACGGAGTTTCGTTTGTACGGTATCGGGTGGTA
TGCTATTCGGGATTTGGGTGTCGAAGCGAAAGGTGAAACTACAGTGGGTC
GTCCGAAGGCAACACGTCACATTGTTACCGAAAGATCTCGAGTGATGATA
ACATCATTATCCATGAGTTATCCACGTGATTGGTATGACGCACTCGATAC
TCCTTAGTGATTCATATAATAGTATCAAGTGAAGAAAAATTAAACGAGGA
GACGGCTGATATATTGATTCATCCTGCCCGTGACTGGATAATACGAAAAA
TACAAACAACACATAACCAATGACCAACCACCCGCTAGACAAATCCACCA
CCCCGGGCTAAAATATGATATAGCTGCCAACTTGGATACGACAAGGGAAT
TCATGCCGACTCAGTGAGGAAATTAATCGTTTTACTTCCTGAGTTGGCAC
GCCCTTTAAACGACGAATCAAAGGGATTTTTTTCCAGGTCGACGTGTCTA
TTGGGTTGTAGAAATGATAGCCAAACAGCGACCGCGCAGGCTTGCAACTA
GTGGATGAGCCTGGATGAGCACTATGTTGTGCCGCCTCTCAAATCTCACA
ATCACGAGGCTTCGCCTTCGTATGCATTTCAAAGACCACGGCTGGACGCT
GTATTTGACCAGTCAGTCGTACGCGAGAATTGAGTTTTGTTGTTACTGCG
CATAAATGCTTCACTGTACTGTAGTAGTACGGTAGCAATGCCGTCTGCAC
TAGAATCTGTGCACCAGCTAATACTATGACGTTGCTACGGCAGCAGCACT
GTACGTTGTATTTTGTGTTCATGTTCTCCTCGCGTGTGCGTGTCTTTGTA
CCCGTAGTGGGCGTGCAACGGGGAGAGGGGGGTAGAGCGAAAGAGAGCAT
GGCCTATGGTAGCGACATAGAAGTGTTAGCGCACATGCGCGCTCTGTTAA
CGCAATGAGGTCAGATATCACCTCTTGCAACAAAACTAGTTTGGGACAGA
CGCACTCTCTGTCAACACACGTACAGCGAAAAAGAAAACAGGTAGATACA
CATACGTCCTGCCAGTGCACACACATGCGACATCTCAACCCAAATAGGCG
GTCAAATGTGAGCTCTATTCCAACGAGCAGATGAGCACTCTGCCTATAGC
GAAGCAAAGCACATCACTACCAAGCCGTAGCACAGACCGGAGGTATGTTT
AGCCAACGCACATACATACGCTTTTCCAGACGGAGGATCCTTCGCACGAC
AGACAGTACGGTCGGTCGTACCATTAAAAAAGCAAAATGCCGAGAATATC
TTGCGAGGGTTAGAATCCATCCATATTCTCCCCGCGACGTCAGGGGAAAA
TGGAATTTTTTCCACGCACTAGAACAAATGACTTTTTTCCGGCACCAAAC
TCATTTGGCGTCGCCAGGCATGTAACCACCTCATATTTGAAAATATATTG
TGTTATTACTTCAAGTACCTGCGACAATTCACCGGATCAACGTGGTCATG
ATCATATGATCAGTTTCATATCAGCAACATTTGTCAAGCTCAAGTGGCGT
TCACTGTGCACGTAGTACGTTCAAGTATCTTTATGAAAATGTACGACAGC
GGCAACTTCCTCTACGTCTATTTGACCTAGCCCCTCAAACTGCACTAAAG
AACCGTATTATTCCACAATCCCTTGGCCACTCATGAAAACACCTAATGAC
GAATGAAGGGCGAAACGCAAAAGCTGTAGCTCTCATGAGCATAAAGGTAC
ACTATAATTTGTACTAAACAAATCAATTCGACATACCCCATTTAACCAAA
CGTCCAGCACGTCACCAGCTGCTTTTCTCGTAGACATAAGCGTCATGAAA
TCTCAAATTAGACCCGCGATCACATACACGATTGTTCAGACCCGCGGTCA
TATTTGCTGTTCTCTACGGTGCTGGGGTCTCTACGGTACTGAGGTTGAAC
GGTAGGCTGCCGGTGCGGTACCAAGGAACCACAGTACAGAAACGGTGAGT
ACCGTCGTTTCACGGTACGGTAAGTCGATATTGCAGTAACGGCAACACTT
TCTGCCTCTTGTATCGTGGTAAGTAGCGTTTGTCATTACCGTGCACGGTA
ACGGTAACAGGAAATTGACATTTTTACGGTATCTTACCGAATACCGAAAA
CTGTGGTTTTAACGCGGTAGTCTCATAGCAGTATTTTACCGAGGGGACCC
CTGGTGATTTTTTTACAAGTCAGTTAGTAGAACACCCGAAAGTCTTGAAT
TTGAGGAATATCAAACCTTCTCTTATAGACGCCAGGAAATTGATTTTCAA
GGCATCGGATTTCCTACAATACTAGCAACTAATTTTATCGAAATGTCCAA
TAATCAAGTTTCCAAAACAAGAATTCGCCATCCATAAAAATGCACTTACA
TTTTTCTCTTTCGGACGAGCCTGAATTAGCGCGCTCATGATCTGTTCAAC
AGTAGCAATCCTACCCCGACAAAATCATTAAACTCAACTCTTTGTTAAAA
CCACTTCCCACTGCCGACATCTCGACCCCTCTTTCCCCTGGTTTGGCCAA
TTTGTGGATAATAACCAAGTAGTTCAATAGCTTGAAGATGCTGAGCATAC
CACCATTTTGTACGTTCATTGTCATGTTTCGACAGTAATTTATCTGGTTC
TACTTTTGACTCGACTCCCTCCCATCCGCCCAACAACACTCAGTTTCATC
CCACAGAAAACTGCGCGCTATCCGCCAGCGAGGATGGTACCGCGCGGATA
TGGGACTTGGACACAGGCCGCTGTATCAAGTCCCTTGACGGACACAGCAA
AAAACACGAAGTTTTGCGAACGTGCTGGGCTCCGCCAGAGGCAGCCGCGT
CCTCTGTAATGGTAGCAACGGGTTCGGCAGATGGTACCGTACGTCTCTGG
GGCATCCCGCCGCCCAGGAACGACAGTGCCCCAGAAAAAGGAGGCAAGAC
AAGCTTGCTGAGTCGTTGTGCTGCGCTCACAGTTGTCGGGCAACTACGCC
ACCGAGACCAAGCTAAAGGACTCGACGGGCAGGTGTACTCGTGCCAATTT
GTTACCGACAACGGAGGCGCAGCAGCAACAGGGGCAACGAGCGGTGCGCC
GTCATCATCATCATCTTCATCTGCTTCTTATGGAGGCCTACGTCTCCTGA
CAGCTAGCGATTGCAGCGTGCACCTATGGGACGTGGAAACTCGAAAGAGG
ATAGCGAGTCAAGCCTTATCCAAAGTGGGCAATTACTCCATCGGCGGGAA
GCGCAACCCTGCAGACCTCTGTTATGTGTTCGACGCTAAACCTCGTCCCG
GCTCCGGAAGTTCCACCCTAGCGGTAGCACTTAGCGATGGCACTGTGCGC
GTCGGTGACATTCTCGGCGGCAGCGAGCAGACCATTGCGTTGAGGAGGGA
GAGCTCCGCCAACACGCACTTGACGGGTCTGAATTGGTCTGAAGACGGAT
TGGTTCTCGCGTCATGCGGTGGAGACGGTACAGTAACGGTATGGGACGCG
AGGATGTGGACGCCGCGCGCGGTCTTGCGAGGCCACTCTCGGCCGGTTTA
CGGCGCATGTTTTTTCCCATCGACCGCTGGGAGAGGCGGTGAAGAGCCAG
CCGAAGATAATACCCCGCAGCTTTTACTGTCTTGGTCCAGCGATGAAACG
CTTTGTGCGTGGGATGCTGCTCGAGCGTGTGGCGTGGAGACACGACCACT
TGTGACGCTCTCTGTGGAGGAAGGGTTTCCAATTTACCATTGCTCCGTGT
CCATGGACGGTAGGCGCCTGGCAATGGCCGGGGGAGGTGGCGGGGGAACG
TCTTTTGTAGGAGTTCCGATCAAGGTTGTAGAGTTGAATCAACCCGACGA
CGCAGCAGCAGTGGATGTAGGGCGATAACGCAGTTTCGAAGCACGCAGCT
CTGGGTTATAGAGTGTGAGTTAAACGCGAACACAGTGCAGCCTGAGGATT
GTTTTTCAGATCAACATGTGCTAAGTGAGGTGTGCGTCAATTATTTATAC
AGTACAGTATGCGCTACTAGTACTGAAGGTGTTATATATTCCAAGGTCTG
TCGCCTCGTTTTGGACTGACAGTTCTAAAATTTTATTGATAAAAATATAG
GCATGTCTACTTCGGGGGAAGTCAGTGTTCTCACTTGGGATTTCCAACAA
CTGTCATGGTTCTAGGTGTCGACCCGGACGATCGTTTGTTCGGAGTGCTA
CCTTGGGGAGGGGGGGAGAGAGCGGCGCTATTGGCAATTAGCTCATGTTG
TGTTCTACGTTGTCAATATGCCACTTTCCGGGAATTAGTACGCATAGTGT
GTCTCCTTTAAGAGAAGTCCCTCATTTGGGACCAAACCGAGTCTTGGGGC
CGTTATAAACGAGGTCATTTTTTGTCCGATTTTTTCTGTTTTTCGTTTTG
CGAAAAGATGGAAATCGTGATAGCGAGCTCAACAAGTGGGCGACTGTAAC
CGAAGTGCACCAGACATATAAGAGCAACATAACGTACACTGTTTCCACAG
ATTTTCCATAATTT
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Coding sequence (CDS) from alignment at H-paniculata_contig2155:13640..19253+

>mRNA_H-paniculata_contig2155.5685.1 ID=mRNA_H-paniculata_contig2155.5685.1|Name=mRNA_H-paniculata_contig2155.5685.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2586bp|location=Sequence derived from alignment at H-paniculata_contig2155:13640..19253+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCAACATTCGAGGAGCTCACAAGCAGAAATATTGAGAATTGCTTTAA
TGAAAAACATAGACATCGTCGCCTGCTGGGACATCAGGCTCGGACCTTCG
ACTTTCAGATGGCAACATTCGAGGAGCTCACAAGCAGAAATATTGAGAAT
TGCTTTAATGAAAAACATAGACATCGTCGCCTGCTGGGACATCAGGCTCG
GACCTTCGACTTTCAGTTTCATCCCACAGAAAACTGCGCGCTATCCGCCA
GCGAGGATGGTACCGCGCGGATATGGGACTTGGACACAGGCCGCTGTATC
AAGTCCCTTGACGGACACAGCAAAAAACACGAAGTTTTGCGAACGTGCTG
GGCTCCGCCAGAGGCAGCCGCGTCCTCTGTAATGGTAGCAACGGGTTCGG
CAGATGGTACCGTACGTCTCTGGGGCATCCCGCCGCCCAGGAACGACAGT
GCCCCAGAAAAAGGAGGCAAGACAAGCTTGCTGAGTCGTTGTGCTGCGCT
CACAGTTGTCGGGCAACTACGCCACCGAGACCAAGCTAAAGGACTCGACG
GGCAGGTGTACTCGTGCCAATTTGTTACCGACAACGGAGGCGCAGCAGCA
ACAGGGGCAACGAGCGGTGCGCCGTCATCATCATCATCTTCATCTGCTTC
TTATGGAGGCCTACGTCTCCTGACAGCTAGCGATTGCAGCGTGCACCTAT
GGGACGTGGAAACTCGAAAGAGGATAGCGAGTCAAGCCTTATCCAAAGTG
GGCAATTACTCCATCGGCGGGAAGCGCAACCCTGCAGACCTCTGTTATGT
GTTCGACGCTAAACCTCGTCCCGGCTCCGGAAGTTCCACCCTAGCGGTAG
CACTTAGCGATGGCACTGTGCGCGTCGGTGACATTCTCGGCGGCAGCGAG
CAGACCATTGCGTTGAGGAGGGAGAGCTCCGCCAACACGCACTTGACGGG
TCTGAATTGGTCTGAAGACGGATTGGTTCTCGCGTCATGCGGTGGAGACG
GTACAGTAACGGTATGGGACGCGAGGATGTGGACGCCGCGCGCGGTCTTG
CGAGGCCACTCTCGGCCGGTTTACGGCGCATGTTTTTTCCCATCGACCGC
TGGGAGAGGCGGTGAAGAGCCAGCCGAAGATAATACCCCGCAGCTTTTAC
TGTCTTGGTCCAGCGATGAAACGCTTTGTGCGTGGGATGCTGCTCGAGCG
TGTGGCGTGGAGACACGACCACTTGTGACGCTCTCTGTGGAGGAAGGGTT
TCCAATTTACCATTGCTCCGTGTCCATGGACGGTAGGCGCCTGGCAATGG
CCGGGGGAGGTGGCGGGGGAACGTCTTTTGTAGGAGTTCCGATCAAGGTT
GTAGAGTTGAATCAACCCGACGACGCAGCAGCAGTGGATGTAGGGCGATA
ATTTCATCCCACAGAAAACTGCGCGCTATCCGCCAGCGAGGATGGTACCG
CGCGGATATGGGACTTGGACACAGGCCGCTGTATCAAGTCCCTTGACGGA
CACAGCAAAAAACACGAAGTTTTGCGAACGTGCTGGGCTCCGCCAGAGGC
AGCCGCGTCCTCTGTAATGGTAGCAACGGGTTCGGCAGATGGTACCGTAC
GTCTCTGGGGCATCCCGCCGCCCAGGAACGACAGTGCCCCAGAAAAAGGA
GGCAAGACAAGCTTGCTGAGTCGTTGTGCTGCGCTCACAGTTGTCGGGCA
ACTACGCCACCGAGACCAAGCTAAAGGACTCGACGGGCAGGTGTACTCGT
GCCAATTTGTTACCGACAACGGAGGCGCAGCAGCAACAGGGGCAACGAGC
GGTGCGCCGTCATCATCATCATCTTCATCTGCTTCTTATGGAGGCCTACG
TCTCCTGACAGCTAGCGATTGCAGCGTGCACCTATGGGACGTGGAAACTC
GAAAGAGGATAGCGAGTCAAGCCTTATCCAAAGTGGGCAATTACTCCATC
GGCGGGAAGCGCAACCCTGCAGACCTCTGTTATGTGTTCGACGCTAAACC
TCGTCCCGGCTCCGGAAGTTCCACCCTAGCGGTAGCACTTAGCGATGGCA
CTGTGCGCGTCGGTGACATTCTCGGCGGCAGCGAGCAGACCATTGCGTTG
AGGAGGGAGAGCTCCGCCAACACGCACTTGACGGGTCTGAATTGGTCTGA
AGACGGATTGGTTCTCGCGTCATGCGGTGGAGACGGTACAGTAACGGTAT
GGGACGCGAGGATGTGGACGCCGCGCGCGGTCTTGCGAGGCCACTCTCGG
CCGGTTTACGGCGCATGTTTTTTCCCATCGACCGCTGGGAGAGGCGGTGA
AGAGCCAGCCGAAGATAATACCCCGCAGCTTTTACTGTCTTGGTCCAGCG
ATGAAACGCTTTGTGCGTGGGATGCTGCTCGAGCGTGTGGCGTGGAGACA
CGACCACTTGTGACGCTCTCTGTGGAGGAAGGGTTTCCAATTTACCATTG
CTCCGTGTCCATGGACGGTAGGCGCCTGGCAATGGCCGGGGGAGGTGGCG
GGGGAACGTCTTTTGTAGGAGTTCCGATCAAGGTTGTAGAGTTGAATCAA
CCCGACGACGCAGCAGCAGTGGATGTAGGGCGATAA
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