prot_H-paniculata_contig21508.5667.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig21508.5667.1
Unique Nameprot_H-paniculata_contig21508.5667.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length110
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21508.5667.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 78..105
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 106..109
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..24
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 48..66
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..47
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 67..77
NoneNo IPR availableTMHMMTMhelixcoord: 48..70
NoneNo IPR availableTMHMMTMhelixcoord: 85..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig21508contigH-paniculata_contig21508:1317..1646 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig21508.5667.1mRNA_H-paniculata_contig21508.5667.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig21508 1186..1646 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig21508.5667.1 ID=prot_H-paniculata_contig21508.5667.1|Name=mRNA_H-paniculata_contig21508.5667.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=110bp
MPCSRAASSITCSTVSSSERVACAAATGDPPVPSCSEHLSLAPDGTDLAW
FGGFPPLFPVVCVFSLSPPADTGVCAAFPSYCVVTFLRTGVMSLLSFVLL
FFFALPFVV*
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