prot_H-paniculata_contig21483.5658.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig21483.5658.1
Unique Nameprot_H-paniculata_contig21483.5658.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length245
Homology
BLAST of mRNA_H-paniculata_contig21483.5658.1 vs. uniprot
Match: A0A6G0WHK2_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WHK2_9STRA)

HSP 1 Score: 135 bits (340), Expect = 1.300e-34
Identity = 77/206 (37.38%), Postives = 126/206 (61.17%), Query Frame = 0
Query:   45 PNSAAEPLNGPEAGKW----HAKWGALVENGTWESEHPGRLPAGRKAIRTKWIFKRKLREGGIMARYKARLLAQGFSQLEGEDFFETSALVARMSILRTVCSLAAEHNFVLEGMDVDAAYLSAPVEEELFVKLPPEVSPFYRD--IPFVRRLGKSLYDLKESGRNWSNNLDDFLVGIGLDRSTTDSCLYFSRDDGGEINLLVAVYV 244
            P++  E +    A KW     ++  +L++N TW+      LP GRKAI  KW+FK K +  G + +YKARL+A+G+SQ  G D+ ET   VA+ + +R + SLAA+HN  L+ MDV+ A+L++ ++E++++++P  ++          V +L KSLY LK++ R W+  +D F++ IG  +S  D C+Y  R D  E  +LV++YV
Sbjct:   45 PSTYQEAMESDNASKWKDACESEIKSLLDNKTWDVVE---LPQGRKAIGCKWVFKVKEKADGSIDKYKARLVAKGYSQTFGIDYEETFTPVAKFTSIRVLLSLAAKHNLELQQMDVNTAFLNSDLDEDIYMEIPMGLNDHKNPGLSKPVLKLKKSLYGLKQAPRLWNQTIDGFMLSIGFVKSKADHCIYIKRQD--EDIILVSLYV 245          
BLAST of mRNA_H-paniculata_contig21483.5658.1 vs. uniprot
Match: A0A182GIT5_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GIT5_AEDAL)

HSP 1 Score: 136 bits (343), Expect = 1.110e-33
Identity = 81/195 (41.54%), Postives = 110/195 (56.41%), Query Frame = 0
Query:   52 LNGPEAGKWHA----KWGALVENGTWESEHPGRLPAGRKAIRTKWIFKRKLREGGIMARYKARLLAQGFSQLEGEDFFETSALVARMSILRTVCSLAAEHNFVLEGMDVDAAYLSAPVEEELFVKLPPEVSPFYRDIPFVRRLGKSLYDLKESGRNWSNNLDDFLVGIGLDRSTTDSCLYFSRDDGGEINLLVAV 242
            + GPEA  W A    +  +L ENGTW+      LP GRKA+  KWIFKRKL E G + RYKARL+AQGF+Q  G D+ E  A V R    R + ++A++   V++  DV  AYL+  +EE +F++ PP      RD   V  L KSLY LK++G  W+   D  L  +   +S  D CLY  R+  G   L++ V
Sbjct:    1 MKGPEAELWKAAMDDEMTSLRENGTWQLTD---LPPGRKAVGCKWIFKRKLDEDGNVVRYKARLVAQGFTQKFGTDYDEVFAPVVRQVTFRVLLTVASQRGMVVKHADVKTAYLNGELEESIFMRQPPGYEDENRDA--VCSLQKSLYGLKQAGYVWNKKFDQVLKRMKFQQSKNDPCLYVRRNGKGYTYLVIYV 190          
BLAST of mRNA_H-paniculata_contig21483.5658.1 vs. uniprot
Match: A0A177T7I3_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia controversa TaxID=13291 RepID=A0A177T7I3_9BASI)

HSP 1 Score: 136 bits (343), Expect = 5.420e-33
Identity = 83/204 (40.69%), Postives = 122/204 (59.80%), Query Frame = 0
Query:   44 EPNSAAEPLNGPEAGKWHA----KWGALVENGTWESEHPGRLPAGRKAIRTKWIFKRKLREGGIMARYKARLLAQGFSQLEGEDFFETSALVARMSILRTVCSLAAEHNFVLEGMDVDAAYLSAPVEEELFVKLPPEVSPFYRD-IPFVRRLGKSLYDLKESGRNWSNNLDDFLVGIGLDRSTTDSCLYFSRDDGGEINLLVAV 242
            EP + A+ L+  +  +W A    ++ +L+E GTWE  HP   PAGRK I  +W++K K    G   R K+RL+AQG++Q+EG DF ET A VAR+S LR + +LA +    L GMDV  AYL+  ++ +L+++ PP     Y D    V RL ++LY LK+SGR W + L D LV  G  +  ++ CL++ + D G   +LV V
Sbjct:  524 EPTTFAQALSREDKAEWKASMDEEYASLIEMGTWELCHP---PAGRKLIGCRWVYKVKTDPEGRAIRKKSRLVAQGYTQVEGIDFDETFAPVARLSALRIMVTLAIQLGLRLHGMDVKTAYLNGELDVDLYMRQPPG----YDDGSGRVCRLLRTLYGLKQSGRYWYHKLRDRLVAAGFSQLKSEPCLFYKQSDQGPTIILVYV 720          
BLAST of mRNA_H-paniculata_contig21483.5658.1 vs. uniprot
Match: A0A1W7R6C8_AEDAL (Putative pol polyprotein (Fragment) n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A1W7R6C8_AEDAL)

HSP 1 Score: 136 bits (343), Expect = 5.570e-33
Identity = 77/204 (37.75%), Postives = 119/204 (58.33%), Query Frame = 0
Query:   43 REPNSAAEPLNGPEAGKWHAKWGALVE----NGTWESEHPGRLPAGRKAIRTKWIFKRKLREGGIMARYKARLLAQGFSQLEGEDFFETSALVARMSILRTVCSLAAEHNFVLEGMDVDAAYLSAPVEEELFVKLPPEVSPFYRDIPFVRRLGKSLYDLKESGRNWSNNLDDFLVGIGLDRSTTDSCLYFSRDDGGEINLLVAV 242
            +EP++  E L G    +W +   A +E    NGTW+     +LP GRKA+  +W++K K    G + +YKARL+AQGFSQ  G+D+ E  A V + + LRT+ ++A++   +L+  DV  AYL   +EEEL+++ PP      ++   V RL +S+Y LK+S R W++ L   L G+G ++S  D C Y    +G  + LLV V
Sbjct:  745 KEPSNLKEALTGANRAEWRSAMEAEMESHEDNGTWDLV---KLPDGRKAVGCRWVYKLKRNAAGKVVKYKARLVAQGFSQKFGQDYDEVFAPVTKQTTLRTLLAVASKKKLILKHFDVKTAYLYGELEEELYMRQPPGFEVNGKE-ELVCRLRRSIYGLKQSARCWNHRLHSVLRGLGFEQSAADPCFYTKVINGKRVYLLVYV 944          
BLAST of mRNA_H-paniculata_contig21483.5658.1 vs. uniprot
Match: H3H7D1_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H7D1_PHYRM)

HSP 1 Score: 129 bits (323), Expect = 6.640e-33
Identity = 76/205 (37.07%), Postives = 122/205 (59.51%), Query Frame = 0
Query:   45 PNSAAEPLNGPEAGKWH----AKWGALVENGTWESEHPGRLPAGRKAIRTKWIFKRKLREGGIMARYKARLLAQGFSQLEGEDFFETSALVARMSILRTVCSLAAEHNFVLEGMDVDAAYLSAPVEEELFVKLPPE-VSPFYRDIPFVRRLGKSLYDLKESGRNWSNNLDDFLVGIGLDRSTTDSCLYFSRDDGGEINLLVAVYV 244
            P +    +   +A KW     ++  +L++N TW+      LP GRKAI  +W+F+ K  + G + R+KARL+A+GFSQ  G D+ ET A VA+ + +R V SLAA++   L  MDV  A+L+  ++E++++  P   V   + D   V +L +SLY LK+S R W+  +DDF++ +G  +  +D C+Y  RD  G+  + VA+YV
Sbjct:    2 PTTFKSAMESSDAAKWKEACDSECDSLLKNDTWDVVP---LPKGRKAIGCRWVFRVKENQAGEIERFKARLVAKGFSQKYGIDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGYVDEDHPD--HVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCIYLKRD--GQDMIFVALYV 199          
BLAST of mRNA_H-paniculata_contig21483.5658.1 vs. uniprot
Match: H3G6E3_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G6E3_PHYRM)

HSP 1 Score: 127 bits (319), Expect = 6.750e-33
Identity = 72/180 (40.00%), Postives = 113/180 (62.78%), Query Frame = 0
Query:   66 ALVENGTWESEHPGRLPAGRKAIRTKWIFKRKLREGGIMARYKARLLAQGFSQLEGEDFFETSALVARMSILRTVCSLAAEHNFVLEGMDVDAAYLSAPVEEELFVKLPPE-VSPFYRDIPFVRRLGKSLYDLKESGRNWSNNLDDFLVGIGLDRSTTDSCLYFSRDDGGEINLLVAVYV 244
            +L++N TW+      LP GRKAI  +W+F+ K  + G + R+KARL+A+GFSQ  G D+ ET A VA+ + +R V SLAA++   L  MDV  A+L+  ++E++++  P   V   + D   V +L +SLY LK+S R W+  +DDF++ +G  +  +D C+Y  RD  G+  + VA+YV
Sbjct:    9 SLLKNDTWDVVP---LPKGRKAIGCRWVFRVKENQAGEIERFKARLVAKGFSQKYGIDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGYVDEDHPD--HVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDLCIYLKRD--GQDMIFVALYV 181          
BLAST of mRNA_H-paniculata_contig21483.5658.1 vs. uniprot
Match: A0A2M4CK12_ANODA (Putative pol polyprotein (Fragment) n=1 Tax=Anopheles darlingi TaxID=43151 RepID=A0A2M4CK12_ANODA)

HSP 1 Score: 135 bits (341), Expect = 9.150e-33
Identity = 77/203 (37.93%), Postives = 117/203 (57.64%), Query Frame = 0
Query:   44 EPNSAAEPLNGPEAGKWHAKW----GALVENGTWESEHPGRLPAGRKAIRTKWIFKRKLREGGIMARYKARLLAQGFSQLEGEDFFETSALVARMSILRTVCSLAAEHNFVLEGMDVDAAYLSAPVEEELFVKLPPEVSPFYRDIPFVRRLGKSLYDLKESGRNWSNNLDDFLVGIGLDRSTTDSCLYFSRDDGGEINLLVAV 242
            +P++ +E +   E+  W A       AL  N TWE     RLP GRKA+  KW +KRK  E G + RYKARL+AQG+SQ  G+D+ E  A V R +  RT+ +LA++ N +++ +D+  AYL A ++E++++K PP    F +    V  L KSLY LK+S R W+  +D  L  +   ++  D CLY    +G +  +L+ V
Sbjct:  351 QPHTYSEAIESTESTAWRAAMQEEINALQGNDTWELV---RLPLGRKAVGCKWTYKRKENENGEIVRYKARLVAQGYSQKFGQDYDEVFAPVIRQATFRTILTLASKQNMIVKHLDIKNAYLHAELQEDIYMKQPPG---FTKGNDLVCHLKKSLYGLKQSARAWNAKIDRVLKEMQFQQAEADQCLYIRTHEGKQDYILIYV 547          
BLAST of mRNA_H-paniculata_contig21483.5658.1 vs. uniprot
Match: A0A2A4JV98_HELVI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Heliothis virescens TaxID=7102 RepID=A0A2A4JV98_HELVI)

HSP 1 Score: 131 bits (330), Expect = 1.590e-32
Identity = 73/209 (34.93%), Postives = 119/209 (56.94%), Query Frame = 0
Query:   38 AEPAGREPNSAAEPLNGPEAGKW----HAKWGALVENGTWESEHPGRLPAGRKAIRTKWIFKRKLREGGIMARYKARLLAQGFSQLEGEDFFETSALVARMSILRTVCSLAAEHNFVLEGMDVDAAYLSAPVEEELFVKLPPEVSPFYRDIPFVRRLGKSLYDLKESGRNWSNNLDDFLVGIGLDRSTTDSCLYFSRDDGGEINLLVAV 242
            A P  +EP S  E L+GP A +W    ++++ +L++N TW       LP  ++ I  KW+FK K    G + RYKARL+ +GF+Q +G ++ E  A V R + +R + +LA ++N  +E MD   A+L   ++ E+++  PP     Y     V +L KS+Y LK++ R W+  L   L  IGL  S+ D C+Y+ ++DG  + +L+ V
Sbjct:  141 AVPLLKEPQSVEEALSGPMAKEWKDAMNSEFESLLQNNTWTLVT---LPENKRVIPCKWVFKMKTNANGEVVRYKARLVIKGFAQKKGIEYNEVFAPVVRHTSIRYLFALAVKYNLYVEQMDAVTAFLQGDIDTEIYMNQPPS----YEHGQEVCKLNKSIYGLKQASRQWNLKLTSVLKNIGLKSSSVDPCVYYKKEDGSIVYILIYV 342          
BLAST of mRNA_H-paniculata_contig21483.5658.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY)

HSP 1 Score: 135 bits (339), Expect = 1.940e-32
Identity = 78/203 (38.42%), Postives = 114/203 (56.16%), Query Frame = 0
Query:   41 AGREPNSAAEPLNGPEAGKWH----AKWGALVENGTWESEHPGRLPAGRKAIRTKWIFKRKLREGGIMARYKARLLAQGFSQLEGEDFFETSALVARMSILRTVCSLAAEHNFVLEGMDVDAAYLSAPVEEELFVKLPPEVSPFYRDIPFVRRLGKSLYDLKESGRNWSNNLDDFLVGIGLDRSTTDSCLYFSRDDGGEINLL 239
            AG EP S AE    PE  +W     A++  L   GTWE +    LP  R A+  KW+F+RK  + G + +YKARL+AQG+SQ+ G DF ET A V R+  +R + +LA  +N+ +  MDV  AYL+  ++EE++++ P     F      + RL K+LY LK+SGR W+  L   L  +G  R   D C+Y      GE+ ++
Sbjct:  903 AGDEPRSLAEAQASPEWPEWEKAVKAEYDQLQGMGTWELQD---LPKDRNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQP---EGFDDGSGRICRLRKTLYGLKQSGREWNRKLHRELTELGYKRLEADPCVYLWERKEGEVQII 1099          
BLAST of mRNA_H-paniculata_contig21483.5658.1 vs. uniprot
Match: H3GB80_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB80_PHYRM)

HSP 1 Score: 126 bits (317), Expect = 2.500e-32
Identity = 72/180 (40.00%), Postives = 112/180 (62.22%), Query Frame = 0
Query:   66 ALVENGTWESEHPGRLPAGRKAIRTKWIFKRKLREGGIMARYKARLLAQGFSQLEGEDFFETSALVARMSILRTVCSLAAEHNFVLEGMDVDAAYLSAPVEEELFVKLPPE-VSPFYRDIPFVRRLGKSLYDLKESGRNWSNNLDDFLVGIGLDRSTTDSCLYFSRDDGGEINLLVAVYV 244
            +L++N TW+      LP GRKAI  +W+F+ K  + G + R+KARL+A+GFSQ  G D+ ET A VA+ + +R V SLAA++   L  MDV  A+L+  ++E++++  P   V   + D   V +L +SLY LK+S R W+  +DDF++ +G     +D C+Y  RD  G+  + VA+YV
Sbjct:   27 SLLKNDTWDVVP---LPKGRKAIGCRWVFRVKENQAGEIERFKARLVAKGFSQKYGIDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGYVDEDHPD--HVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKNCESDHCVYLKRD--GQDMIFVALYV 199          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21483.5658.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6G0WHK2_9STRA1.300e-3437.38Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A182GIT5_AEDAL1.110e-3341.54Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A177T7I3_9BASI5.420e-3340.69Integrase catalytic domain-containing protein n=1 ... [more]
A0A1W7R6C8_AEDAL5.570e-3337.75Putative pol polyprotein (Fragment) n=1 Tax=Aedes ... [more]
H3H7D1_PHYRM6.640e-3337.07Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3G6E3_PHYRM6.750e-3340.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2M4CK12_ANODA9.150e-3337.93Putative pol polyprotein (Fragment) n=1 Tax=Anophe... [more]
A0A2A4JV98_HELVI1.590e-3234.93Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A401GYH9_9APHY1.940e-3238.42Uncharacterized protein n=6 Tax=Sparassis crispa T... [more]
H3GB80_PHYRM2.500e-3240.00Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 81..244
e-value: 1.1E-37
score: 130.0
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 66..228
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 66..228

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig21483contigH-paniculata_contig21483:2538..3468 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig21483.5658.1mRNA_H-paniculata_contig21483.5658.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig21483 1548..4046 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig21483.5658.1 ID=prot_H-paniculata_contig21483.5658.1|Name=mRNA_H-paniculata_contig21483.5658.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=245bp
MPAILPTHSLPATSAKPFSVLNDDDDDKSNVDSKMKDAEPAGREPNSAAE
PLNGPEAGKWHAKWGALVENGTWESEHPGRLPAGRKAIRTKWIFKRKLRE
GGIMARYKARLLAQGFSQLEGEDFFETSALVARMSILRTVCSLAAEHNFV
LEGMDVDAAYLSAPVEEELFVKLPPEVSPFYRDIPFVRRLGKSLYDLKES
GRNWSNNLDDFLVGIGLDRSTTDSCLYFSRDDGGEINLLVAVYV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like