mRNA_H-paniculata_contig21483.5658.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig21483.5658.1 vs. uniprot
Match: A0A182GIT5_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GIT5_AEDAL) HSP 1 Score: 138 bits (348), Expect = 2.760e-31 Identity = 81/195 (41.54%), Postives = 110/195 (56.41%), Query Frame = 3
Query: 732 LNGPEAGKWHA----KWGALVENGTWESEHPGRLPAGRKAIRTKWIFKRKLREGGIMARYKARLLAQGFSQLEGEDFFETSALVARMSILRTVCSLAAEHNFVLEGMDVDAAYLSAPVEEELFVKLPPEVSPFYRDIPFVRRLGKSLYDLKESGRNWSNNLDDFLVGIGLDRSTTDSCLYFSRDDGGEINLLVAV 1304
+ GPEA W A + +L ENGTW+ LP GRKA+ KWIFKRKL E G + RYKARL+AQGF+Q G D+ E A V R R + ++A++ V++ DV AYL+ +EE +F++ PP RD V L KSLY LK++G W+ D L + +S D CLY R+ G L++ V
Sbjct: 1 MKGPEAELWKAAMDDEMTSLRENGTWQLTD---LPPGRKAVGCKWIFKRKLDEDGNVVRYKARLVAQGFTQKFGTDYDEVFAPVVRQVTFRVLLTVASQRGMVVKHADVKTAYLNGELEESIFMRQPPGYEDENRDA--VCSLQKSLYGLKQAGYVWNKKFDQVLKRMKFQQSKNDPCLYVRRNGKGYTYLVIYV 190
BLAST of mRNA_H-paniculata_contig21483.5658.1 vs. uniprot
Match: A0A2M4CK12_ANODA (Putative pol polyprotein (Fragment) n=1 Tax=Anopheles darlingi TaxID=43151 RepID=A0A2M4CK12_ANODA) HSP 1 Score: 139 bits (351), Expect = 7.340e-31 Identity = 88/251 (35.06%), Postives = 138/251 (54.98%), Query Frame = 3
Query: 708 EPNSAAEPLNGPEAGKWHAKW----GALVENGTWESEHPGRLPAGRKAIRTKWIFKRKLREGGIMARYKARLLAQGFSQLEGEDFFETSALVARMSILRTVCSLAAEHNFVLEGMDVDAAYLSAPVEEELFVKLPPEVSPFYRDIPFVRRLGKSLYDLKESGRNWSNNLDDFLVGIGLDRSTTDSCLYFSRDDGGE------INLLVAVYV*QPDHCWPS*ERRRVQA*QKSAF*DER--LGLSLARVGNR 1424
+P++ +E + E+ W A AL N TWE RLP GRKA+ KW +KRK E G + RYKARL+AQG+SQ G+D+ E A V R + RT+ +LA++ N +++ +D+ AYL A ++E++++K PP F + V L KSLY LK+S R W+ +D L + ++ D CLY +G + ++ +VAVY + + + +R Q + S D + LG+ +A G+R
Sbjct: 351 QPHTYSEAIESTESTAWRAAMQEEINALQGNDTWELV---RLPLGRKAVGCKWTYKRKENENGEIVRYKARLVAQGYSQKFGQDYDEVFAPVIRQATFRTILTLASKQNMIVKHLDIKNAYLHAELQEDIYMKQPPG---FTKGNDLVCHLKKSLYGLKQSARAWNAKIDRVLKEMQFQQAEADQCLYIRTHEGKQDYILIYVDDIVAVYNTKEE--YEELRKRLEQHFKLSCLGDIKHFLGIRVANNGDR 593
BLAST of mRNA_H-paniculata_contig21483.5658.1 vs. uniprot
Match: A0A8J6L6Q6_TENMO (Uncharacterized protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6L6Q6_TENMO) HSP 1 Score: 139 bits (351), Expect = 1.140e-30 Identity = 170/747 (22.76%), Postives = 267/747 (35.74%), Query Frame = 1
Query: 1 GIKQEFSAAYKPQQNDMVERSWRNIFEMARANMITANMGRRH*AEAVRSALYCLNRVPTRPHNGGTPYEKWYGELPKLDHLRFFGCKV*VMFQSQQRRKLDDEAWAGVFLGYDEDSPSYRIYSPENKSVQLSRNVRSDEEDFVTGHPGQKEQDGTRNMKLFFQHRQSRERSLDPARKASKETLTRKTGRQRHKCRRYCRHIRCRPPAQNHSVS*TMTMMT-----KVMLTPK*RMRSPQGGSRIPRQNH*TVQRRENGTRNGGRWWKMEHGKANTRGGYRQGGRQFVRNGFSSGN*GRAASWHATKRDCWLKVFHSWRVKISLKPVPS*LACRFYVLFVA*LPNIISY*KAWT*MRRI*APP*KKSCLLSYPPRFPLSTETYRLCAAWVKACTISRRAAETGVTILTIFLLG*DSTVPLPTHACTFLATMGER*TFWWPSMFDNLIIAGRRENVDEFKHNKSQRFRMKDLGSLSRVLGTDVRRDRPEGTITTSESSYI----------------------------------------RESNG---------------------------------------------------------HGLEGFVDADWAEDVEDRKPTIRYVLKHNGGAISWCSRKQQLVTWSSTEAGRHILGTTDLEC---------------KRSTTLIEDNTSAINFSKGSGTHCRTKHIDVRWPGTRECIQEGVLSLKYVQTGDQLAEILTKGLSKAKFQ 1890
G++ + + Y PQQN + ER+ R I E AR+ + A + + + AEAV +A+Y +NR PTR N TP E W G P + HL+ FGCK V R K D +F+GY E+S YR Y P+ + V R+ E +F+ + T + + E +K T ++ R+ R + +P + V + +T + TP+ + SPQ ENGT W + K N + R F ++ R L+ S K LK + + N + K+ + P F + + ++C KA ++ + + L L T T C + G + + D LI + K++ +++F MKDLG +S+ LG + RD TI +S YI RE+ G + + + DADW D+ DR+ T +++ HN +SW S+KQ V S+TEA L T E + TTL DN A++ + +G RTKHID+R R+ +++ + +K + T D +A+ LTK L AKFQ
Sbjct: 554 GVRHQLTIPYTPQQNGVAERTNRTIVEKARSLLSDAGLPKAYWAEAVSTAVYLINRTPTRVLNFKTPEEIWTGRKPDISHLKIFGCKAMVYVPKPLRLKWDSPTRDAIFIGYPEESKGYRFYDPQTRKVFKGRDAVFMETEFLAQLKRNETNVATFELAVPTDDEDDEEPQTASPTATTKIPETINEEEPQNMLRKTTR--KPKPKKDDDYVYYKINAITHENEDEDPQTPEEALNSPQSHLWKSAMEEEYKALMENGT------WTLTDPKPNAK-------VLKTRIHFEE-------TYSPVIRMETLRFLISMAAKYDLK------------IHQLDVKNAFLHGDL------------KEELYIQQPTGFEQTGKENQICKLR-KAMYGLKQGSRAWNSKLNSVLTKIGFTRS-QTDPCVYTKRAGRKMELLAVYVDDILIFSNDDFATSSTKNSLNEKFHMKDLGQVSKCLGINFTRDWKRHTIHIDQSDYILNLLKRFKMEDSHPVRTPEDVNQKLDLHTNETETTPIFPYREAIGGLLYLTQISRPDIAHAVNYLSRFNQNPDIVHWRAVKRILRYLKSTISLKMEFSSLEENTITAYCDADWGNDLADRRSTTGFIIFHNRNPVSWSSKKQPTVALSTTEAEYMALSYTCQELIWLRSLASELDPTSVEEPTTLYNDNKGAVDLASDAGFSQRTKHIDLRHHFIRQLVEDAKIKVKLISTQDMIADALTKPLCVAKFQ 1252
BLAST of mRNA_H-paniculata_contig21483.5658.1 vs. uniprot
Match: A0A177T7I3_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia controversa TaxID=13291 RepID=A0A177T7I3_9BASI) HSP 1 Score: 138 bits (348), Expect = 2.390e-30 Identity = 83/204 (40.69%), Postives = 122/204 (59.80%), Query Frame = 3
Query: 708 EPNSAAEPLNGPEAGKWHA----KWGALVENGTWESEHPGRLPAGRKAIRTKWIFKRKLREGGIMARYKARLLAQGFSQLEGEDFFETSALVARMSILRTVCSLAAEHNFVLEGMDVDAAYLSAPVEEELFVKLPPEVSPFYRD-IPFVRRLGKSLYDLKESGRNWSNNLDDFLVGIGLDRSTTDSCLYFSRDDGGEINLLVAV 1304
EP + A+ L+ + +W A ++ +L+E GTWE HP PAGRK I +W++K K G R K+RL+AQG++Q+EG DF ET A VAR+S LR + +LA + L GMDV AYL+ ++ +L+++ PP Y D V RL ++LY LK+SGR W + L D LV G + ++ CL++ + D G +LV V
Sbjct: 524 EPTTFAQALSREDKAEWKASMDEEYASLIEMGTWELCHP---PAGRKLIGCRWVYKVKTDPEGRAIRKKSRLVAQGYTQVEGIDFDETFAPVARLSALRIMVTLAIQLGLRLHGMDVKTAYLNGELDVDLYMRQPPG----YDDGSGRVCRLLRTLYGLKQSGRYWYHKLRDRLVAAGFSQLKSEPCLFYKQSDQGPTIILVYV 720
BLAST of mRNA_H-paniculata_contig21483.5658.1 vs. uniprot
Match: A0A2A4JV98_HELVI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Heliothis virescens TaxID=7102 RepID=A0A2A4JV98_HELVI) HSP 1 Score: 133 bits (335), Expect = 2.630e-30 Identity = 73/209 (34.93%), Postives = 119/209 (56.94%), Query Frame = 3
Query: 690 AEPAGREPNSAAEPLNGPEAGKW----HAKWGALVENGTWESEHPGRLPAGRKAIRTKWIFKRKLREGGIMARYKARLLAQGFSQLEGEDFFETSALVARMSILRTVCSLAAEHNFVLEGMDVDAAYLSAPVEEELFVKLPPEVSPFYRDIPFVRRLGKSLYDLKESGRNWSNNLDDFLVGIGLDRSTTDSCLYFSRDDGGEINLLVAV 1304
A P +EP S E L+GP A +W ++++ +L++N TW LP ++ I KW+FK K G + RYKARL+ +GF+Q +G ++ E A V R + +R + +LA ++N +E MD A+L ++ E+++ PP Y V +L KS+Y LK++ R W+ L L IGL S+ D C+Y+ ++DG + +L+ V
Sbjct: 141 AVPLLKEPQSVEEALSGPMAKEWKDAMNSEFESLLQNNTWTLVT---LPENKRVIPCKWVFKMKTNANGEVVRYKARLVIKGFAQKKGIEYNEVFAPVVRHTSIRYLFALAVKYNLYVEQMDAVTAFLQGDIDTEIYMNQPPS----YEHGQEVCKLNKSIYGLKQASRQWNLKLTSVLKNIGLKSSSVDPCVYYKKEDGSIVYILIYV 342
BLAST of mRNA_H-paniculata_contig21483.5658.1 vs. uniprot
Match: A0A1W7R6C8_AEDAL (Putative pol polyprotein (Fragment) n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A1W7R6C8_AEDAL) HSP 1 Score: 138 bits (348), Expect = 2.660e-30 Identity = 77/204 (37.75%), Postives = 119/204 (58.33%), Query Frame = 3
Query: 705 REPNSAAEPLNGPEAGKWHAKWGALVE----NGTWESEHPGRLPAGRKAIRTKWIFKRKLREGGIMARYKARLLAQGFSQLEGEDFFETSALVARMSILRTVCSLAAEHNFVLEGMDVDAAYLSAPVEEELFVKLPPEVSPFYRDIPFVRRLGKSLYDLKESGRNWSNNLDDFLVGIGLDRSTTDSCLYFSRDDGGEINLLVAV 1304
+EP++ E L G +W + A +E NGTW+ +LP GRKA+ +W++K K G + +YKARL+AQGFSQ G+D+ E A V + + LRT+ ++A++ +L+ DV AYL +EEEL+++ PP ++ V RL +S+Y LK+S R W++ L L G+G ++S D C Y +G + LLV V
Sbjct: 745 KEPSNLKEALTGANRAEWRSAMEAEMESHEDNGTWDLV---KLPDGRKAVGCRWVYKLKRNAAGKVVKYKARLVAQGFSQKFGQDYDEVFAPVTKQTTLRTLLAVASKKKLILKHFDVKTAYLYGELEEELYMRQPPGFEVNGKE-ELVCRLRRSIYGLKQSARCWNHRLHSVLRGLGFEQSAADPCFYTKVINGKRVYLLVYV 944
BLAST of mRNA_H-paniculata_contig21483.5658.1 vs. uniprot
Match: A0A182G9H3_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182G9H3_AEDAL) HSP 1 Score: 133 bits (334), Expect = 3.450e-30 Identity = 81/205 (39.51%), Postives = 114/205 (55.61%), Query Frame = 3
Query: 708 EPNSAAEPLNGPEAGKWHA----KWGALVENGTWESEHPGRLPAGRKAIRTKWIFKRKLREGGIMARYKARLLAQGFSQLEGEDFFETSALVARMSILRTVCSLAAEHNFVLEGMDVDAAYLSAPVEEELFVKLPPEVSPFYRDIPFVRRLGKSLYDLKESGRNWSNNLDDFLVGIGLDRSTTDSCLYFSRDDGGEINLLVAVYV 1310
EP + E L+GPE+ W A + + EN TW LP+GR I KWIFKR++ E G + RYKARL+AQGF+Q G D+ E A V + RT+ S+A + N +++ MDV AYL+ ++E +F+K PP + + V L K LY LKE+ W+ L+ L +G S D CLY R+ G + +AVYV
Sbjct: 137 EPRTIKEALDGPESELWKAAIEEELQSHKENCTWNVVP---LPSGRITIGCKWIFKRRMDESGKVVRYKARLVAQGFTQKIGTDYDEVFAPVVKQVTFRTLLSVAHQRNMLIKHMDVKTAYLNGELQETVFMKPPPGCD--FGNQNLVCHLQKGLYGLKEAANIWNKKLNSILRKLGFKPSENDPCLYSKRNSDGTM-AYIAVYV 335
BLAST of mRNA_H-paniculata_contig21483.5658.1 vs. uniprot
Match: A0A6S7H257_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7H257_PARCT) HSP 1 Score: 133 bits (335), Expect = 5.370e-30 Identity = 81/209 (38.76%), Postives = 122/209 (58.37%), Query Frame = 3
Query: 708 EPNSAAEPLNGPEAGKW----HAKWGALVENGTWESEHPGRLPAGRKAIRTKWIFKRKLREGGIMARYKARLLAQGFSQLEGEDFFETSALVARMSILRTVCSLAAEHNFVLEGMDVDAAYLSAPVEEELFVKLPPE-VSPFYRDIPFVRRLGKSLYDLKESGRNWSNNLDDFLVGIGLDRSTTDSCLYFS--RDDGGEINLLV-AVYV 1310
EP + LNG ++ KW A++ +LV+ TW+ P P + +KW+FK K + G + RYKARL+AQG+SQ G D+ E A VAR S +RT+ +LA H+ + MDV A+L+ +E +++++ P V P D V +L +S+Y LK+S R W+ LD+FL+ G +S DSCLY + D G I+ ++ AVYV
Sbjct: 212 EPKYVTDALNGTKSAKWKQALEAEYNSLVKCETWDLVPP---PDDACIVGSKWVFKVKRKANGEVDRYKARLVAQGYSQTYGVDYEEVFAPVARYSSIRTLLALANAHDLEIHQMDVTTAFLNGSLEHDIYMEQPEGFVDPNCPD--HVCKLKRSIYGLKQSARCWNQTLDNFLIKNGYRKSNADSCLYVKSVKQDNGRISFVILAVYV 415
BLAST of mRNA_H-paniculata_contig21483.5658.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY) HSP 1 Score: 136 bits (343), Expect = 1.200e-29 Identity = 78/204 (38.24%), Postives = 114/204 (55.88%), Query Frame = 3
Query: 699 AGREPNSAAEPLNGPEAGKWH----AKWGALVENGTWESEHPGRLPAGRKAIRTKWIFKRKLREGGIMARYKARLLAQGFSQLEGEDFFETSALVARMSILRTVCSLAAEHNFVLEGMDVDAAYLSAPVEEELFVKLPPEVSPFYRDIPFVRRLGKSLYDLKESGRNWSNNLDDFLVGIGLDRSTTDSCLYFSRDDGGEINLLV 1298
AG EP S AE PE +W A++ L GTWE + LP R A+ KW+F+RK + G + +YKARL+AQG+SQ+ G DF ET A V R+ +R + +LA +N+ + MDV AYL+ ++EE++++ P F + RL K+LY LK+SGR W+ L L +G R D C+Y GE+ ++
Sbjct: 903 AGDEPRSLAEAQASPEWPEWEKAVKAEYDQLQGMGTWELQD---LPKDRNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQP---EGFDDGSGRICRLRKTLYGLKQSGREWNRKLHRELTELGYKRLEADPCVYLWERKEGEVQIIT 1100
BLAST of mRNA_H-paniculata_contig21483.5658.1 vs. uniprot
Match: A0A182GDL1_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GDL1_AEDAL) HSP 1 Score: 129 bits (323), Expect = 1.200e-29 Identity = 79/205 (38.54%), Postives = 117/205 (57.07%), Query Frame = 3
Query: 708 EPNSAAEPLNGPEAGKWHA----KWGALVENGTWESEHPGRLPAGRKAIRTKWIFKRKLREGGIMARYKARLLAQGFSQLEGEDFFETSALVARMSILRTVCSLAAEHNFVLEGMDVDAAYLSAPVEEELFVKLPPEVSPFYR--DIPFVRRLGKSLYDLKESGRNWSNNLDDFLVGIGLDRSTTDSCLYFSRDDGGEINLLVAV 1304
EP+S E + E+ W A ++ +L+ENGTW LPAGRKAI +KW+FK+K G + ++KARL+AQGFSQ G D+ A VA + LRT+ S+A + + +DV +AYL ++EEL+++ P F R + V RL +SLY LK+ + W++ + L IG +S D CL+ G +I LL+ V
Sbjct: 8 EPSSYEEAVRSSESDLWKAAMQEEYDSLMENGTWVLAE---LPAGRKAIGSKWVFKKKEDSAGNVCKFKARLVAQGFSQQFGVDYDSVFAPVAAQTTLRTLLSVAGKKKMKVRHLDVKSAYLHGQLKEELYMQQP---KGFVRRGEEKLVCRLQRSLYGLKQGAKVWNDTICAILGEIGFHQSRADPCLFSKSVSGRQIYLLIYV 206 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21483.5658.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig21483.5658.1 >prot_H-paniculata_contig21483.5658.1 ID=prot_H-paniculata_contig21483.5658.1|Name=mRNA_H-paniculata_contig21483.5658.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=245bp MPAILPTHSLPATSAKPFSVLNDDDDDKSNVDSKMKDAEPAGREPNSAAEback to top mRNA from alignment at H-paniculata_contig21483:1548..4046- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig21483.5658.1 ID=mRNA_H-paniculata_contig21483.5658.1|Name=mRNA_H-paniculata_contig21483.5658.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2499bp|location=Sequence derived from alignment at H-paniculata_contig21483:1548..4046- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig21483:1548..4046- >mRNA_H-paniculata_contig21483.5658.1 ID=mRNA_H-paniculata_contig21483.5658.1|Name=mRNA_H-paniculata_contig21483.5658.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1470bp|location=Sequence derived from alignment at H-paniculata_contig21483:1548..4046- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |