prot_H-paniculata_contig21469.5652.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig21469.5652.1
Unique Nameprot_H-paniculata_contig21469.5652.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length58
Homology
BLAST of mRNA_H-paniculata_contig21469.5652.1 vs. uniprot
Match: D7G873_ECTSI (Chromodomain-helicase-DNA-binding protein 8 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G873_ECTSI)

HSP 1 Score: 110 bits (274), Expect = 1.060e-26
Identity = 50/58 (86.21%), Postives = 53/58 (91.38%), Query Frame = 0
Query:    1 MEDDLSVVFHEPVDLDAYPSYAEKVDEPMDFGTIKAKLDNWEYRRNDPLGFTRDMRLV 58
            MEDDLS+VFH+PVDLDAYPSY EKVDEPMD GTIK KLDNWEYRRNDP+GF RD RLV
Sbjct:  424 MEDDLSLVFHDPVDLDAYPSYEEKVDEPMDLGTIKGKLDNWEYRRNDPMGFLRDGRLV 481          
BLAST of mRNA_H-paniculata_contig21469.5652.1 vs. uniprot
Match: A0A7R9W4F0_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W4F0_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 2.340e-8
Identity = 27/57 (47.37%), Postives = 36/57 (63.16%), Query Frame = 0
Query:    2 EDDLSVVFHEPVDLDAYPSYAEKVDEPMDFGTIKAKLDNWEYRRNDPLGFTRDMRLV 58
            ED  S +F EPV    +P Y E +D+PMD GTI+ K+DN +Y+   P  F RD+R V
Sbjct:   41 EDSYSGIFQEPVSTTDFPDYEEYIDQPMDLGTIRTKVDNRKYQ--SPEQFARDVRKV 95          
BLAST of mRNA_H-paniculata_contig21469.5652.1 vs. uniprot
Match: A0A1E7EUY5_9STRA (Bromodomain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EUY5_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 2.650e-8
Identity = 26/51 (50.98%), Postives = 33/51 (64.71%), Query Frame = 0
Query:    8 VFHEPVDLDAYPSYAEKVDEPMDFGTIKAKLDNWEYRRNDPLGFTRDMRLV 58
            +F EPV  D +P Y E+V  PMD+GT+K KLDN EYR    +   +D RLV
Sbjct:    1 IFSEPVPRDDFPEYYEQVKTPMDYGTMKKKLDNGEYRSGQAM--QKDFRLV 49          
BLAST of mRNA_H-paniculata_contig21469.5652.1 vs. uniprot
Match: E1ZPU3_CHLVA (Bromo domain-containing protein (Fragment) n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZPU3_CHLVA)

HSP 1 Score: 53.9 bits (128), Expect = 4.770e-8
Identity = 28/50 (56.00%), Postives = 32/50 (64.00%), Query Frame = 0
Query:    9 FHEPVDLDAYPSYAEKVDEPMDFGTIKAKLDNWEYRRNDPLGFTRDMRLV 58
            F+ PVDL  YP YAE V  PMDFGTIK ++D   YR  D   F  D+RLV
Sbjct:    4 FNAPVDLRQYPDYAETVSRPMDFGTIKRRIDVGLYRHPDE--FLSDVRLV 51          
BLAST of mRNA_H-paniculata_contig21469.5652.1 vs. uniprot
Match: A0A8J6ELY2_ELECQ (Uncharacterized protein n=2 Tax=Eleutherodactylus coqui TaxID=57060 RepID=A0A8J6ELY2_ELECQ)

HSP 1 Score: 55.1 bits (131), Expect = 2.490e-7
Identity = 25/50 (50.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:    9 FHEPVDLDAYPSYAEKVDEPMDFGTIKAKLDNWEYRRNDPLGFTRDMRLV 58
            F +PV+  +YP Y + +D PMDF T+KAKL+  EY  +DPL F +D+RL+
Sbjct: 1323 FRQPVNSVSYPDYQDIIDNPMDFSTVKAKLEAGEY--SDPLEFGQDVRLI 1370          
BLAST of mRNA_H-paniculata_contig21469.5652.1 vs. uniprot
Match: A0A2P6THZ3_CHLSO (Alkaline phosphatase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6THZ3_CHLSO)

HSP 1 Score: 54.7 bits (130), Expect = 3.400e-7
Identity = 27/50 (54.00%), Postives = 32/50 (64.00%), Query Frame = 0
Query:    9 FHEPVDLDAYPSYAEKVDEPMDFGTIKAKLDNWEYRRNDPLGFTRDMRLV 58
            F+ PVDL  YP YAE +  PMDFGTIK ++D   YR  D   F  D+RLV
Sbjct:  170 FNAPVDLKQYPDYAEAIKTPMDFGTIKRRIDQGGYRHPDE--FLADVRLV 217          
BLAST of mRNA_H-paniculata_contig21469.5652.1 vs. uniprot
Match: A0A0L0HH39_SPIPD (Uncharacterized protein n=1 Tax=Spizellomyces punctatus (strain DAOM BR117) TaxID=645134 RepID=A0A0L0HH39_SPIPD)

HSP 1 Score: 52.4 bits (124), Expect = 2.220e-6
Identity = 28/53 (52.83%), Postives = 36/53 (67.92%), Query Frame = 0
Query:    6 SVVFHEPVDLDAYPSYAEKVDEPMDFGTIKAKLDNWEYRRNDPLGFTRDMRLV 58
            S VF EPVDL+ +P Y + VD+PMDFGTI AKLD+  Y +     F +D+ LV
Sbjct:  551 SDVFAEPVDLERFPQYLDFVDQPMDFGTIGAKLDDNCYTKIQD--FVKDVLLV 601          
BLAST of mRNA_H-paniculata_contig21469.5652.1 vs. uniprot
Match: A0A7S3P5L3_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P5L3_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 2.240e-6
Identity = 23/36 (63.89%), Postives = 28/36 (77.78%), Query Frame = 0
Query:    9 FHEPVDLDAYPSYAEKVDEPMDFGTIKAKLDNWEYR 44
            F EPV  D +P Y EKV +PMD+GT+KAKL+N EYR
Sbjct: 2244 FSEPVPKDEFPDYYEKVKQPMDYGTMKAKLENKEYR 2279          
BLAST of mRNA_H-paniculata_contig21469.5652.1 vs. uniprot
Match: A0A6P4YCD1_BRABE (peregrin-like isoform X1 n=38 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4YCD1_BRABE)

HSP 1 Score: 51.6 bits (122), Expect = 4.170e-6
Identity = 25/57 (43.86%), Postives = 33/57 (57.89%), Query Frame = 0
Query:    2 EDDLSVVFHEPVDLDAYPSYAEKVDEPMDFGTIKAKLDNWEYRRNDPLGFTRDMRLV 58
            E D   +F EPV LD  P Y E + EPMDF T++ K++  +YR  D   F RD  L+
Sbjct:  646 EKDAGKIFSEPVPLDEVPDYLEYIKEPMDFATMRTKVEGHQYRSLDD--FERDFELI 700          
BLAST of mRNA_H-paniculata_contig21469.5652.1 vs. uniprot
Match: UPI00067BDC41 (bromodomain adjacent to zinc finger domain protein 1A n=1 Tax=Amyelois transitella TaxID=680683 RepID=UPI00067BDC41)

HSP 1 Score: 51.6 bits (122), Expect = 4.180e-6
Identity = 23/41 (56.10%), Postives = 29/41 (70.73%), Query Frame = 0
Query:    9 FHEPVDLDAYPSYAEKVDEPMDFGTIKAKLDNWEYRRNDPL 49
            F+EPVD+DA P Y E + EPMDF T+K KL+  EYR +  L
Sbjct: 1342 FYEPVDVDAVPDYLEVISEPMDFTTMKQKLEGGEYRSDGEL 1382          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21469.5652.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G873_ECTSI1.060e-2686.21Chromodomain-helicase-DNA-binding protein 8 n=2 Ta... [more]
A0A7R9W4F0_9STRA2.340e-847.37Hypothetical protein (Fragment) n=2 Tax=Pseudictyo... [more]
A0A1E7EUY5_9STRA2.650e-850.98Bromodomain-containing protein (Fragment) n=1 Tax=... [more]
E1ZPU3_CHLVA4.770e-856.00Bromo domain-containing protein (Fragment) n=1 Tax... [more]
A0A8J6ELY2_ELECQ2.490e-750.00Uncharacterized protein n=2 Tax=Eleutherodactylus ... [more]
A0A2P6THZ3_CHLSO3.400e-754.00Alkaline phosphatase n=1 Tax=Chlorella sorokiniana... [more]
A0A0L0HH39_SPIPD2.220e-652.83Uncharacterized protein n=1 Tax=Spizellomyces punc... [more]
A0A7S3P5L3_9STRA2.240e-663.89Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A6P4YCD1_BRABE4.170e-643.86peregrin-like isoform X1 n=38 Tax=Branchiostoma Ta... [more]
UPI00067BDC414.180e-656.10bromodomain adjacent to zinc finger domain protein... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001487BromodomainPRINTSPR00503BROMODOMAINcoord: 4..17
score: 31.83
coord: 34..52
score: 23.91
coord: 18..34
score: 41.56
coord: 54..58
score: 11.85
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 1..58
e-value: 9.3E-11
score: 41.7
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 1..58
score: 13.299
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 1..58
e-value: 3.1E-15
score: 57.8
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 2..58
NoneNo IPR availablePANTHERPTHR45926FAMILY NOT NAMEDcoord: 1..58
NoneNo IPR availablePANTHERPTHR45926:SF5TRANSCRIPTION FACTOR GTE4coord: 1..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig21469contigH-paniculata_contig21469:2831..3004 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig21469.5652.1mRNA_H-paniculata_contig21469.5652.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig21469 2831..3004 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig21469.5652.1 ID=prot_H-paniculata_contig21469.5652.1|Name=mRNA_H-paniculata_contig21469.5652.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=58bp
MEDDLSVVFHEPVDLDAYPSYAEKVDEPMDFGTIKAKLDNWEYRRNDPLG
FTRDMRLV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001487Bromodomain
IPR036427Bromodomain-like_sf