mRNA_H-paniculata_contig21424.5638.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig21424.5638.1 vs. uniprot
Match: D8LM93_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM93_ECTSI) HSP 1 Score: 299 bits (765), Expect = 4.650e-98 Identity = 141/215 (65.58%), Postives = 171/215 (79.53%), Query Frame = 1
Query: 1 QTQPEGENRYGQDNSVYPVLETFAEGSVVEIKVVMSTYHWGHLEIFVCNADDLPGGPDGTLTQSCFNKYPLDRATDDGDASPIDPNHPGRYFVDPPCRAAETDQSMPTGAETGEVVTARYQLPEDLTCERCTLQMVYYTGNSCHHPGYEEFNPPSWPSECAPNKEDWITLEPGICGGDDHYPEEFWNCADIAITSGGSPGPXXXXXXXXQPTIPE 645
QT E N+YGQ+NS YPV ET+AEG ++E+K+V+STYHWGH+E+F+CNA +LPGGPD T+TQSCFN++PLDRA DD P DP++ GR+ +DPPCRA+ETDQ++ GA +V TAR++LP+ L+CERC +QMVYYTGNSC H GY EFNPPSWPS CAP+K DWI G CG D YPEEFWNCADI+ITS G P PXXXXXXXX T PE
Sbjct: 109 QTAAESSNKYGQENSNYPVRETYAEGGILEVKIVVSTYHWGHVEMFLCNAANLPGGPDSTVTQSCFNEHPLDRADDDEFNGPADPDNTGRFILDPPCRASETDQALLDGAYPSDVATARFKLPQGLSCERCVVQMVYYTGNSCKHQGYAEFNPPSWPSSCAPSKADWINEVVGQCGDGDAYPEEFWNCADISITSDGGPAPXXXXXXXXXXTAPE 323
BLAST of mRNA_H-paniculata_contig21424.5638.1 vs. uniprot
Match: D8LD67_ECTSI (EsV-1-166 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD67_ECTSI) HSP 1 Score: 302 bits (774), Expect = 2.530e-97 Identity = 132/199 (66.33%), Postives = 159/199 (79.90%), Query Frame = 1
Query: 1 QTQPEGENRYGQDNSVYPVLETFAEGSVVEIKVVMSTYHWGHLEIFVCNADDLPGGPDGTLTQSCFNKYPLDRATDDGDASPIDPNHPGRYFVDPPCRAAETDQSMPTGAETGEVVTARYQLPEDLTCERCTLQMVYYTGNSCHHPGYEEFNPPSWPSECAPNKEDWITLEPGICGGDDHYPEEFWNCADIAITSGGSP 597
QT EG N+YGQ+NS YPVLET+AEG ++E+K+V+STYHWGH+E+F+C+ADDLP GPD +TQSCFN+YPLDRA DD PIDP + GR+ +DPPCRA+ETDQ + GA G+V TAR+QLP+ +TCERC +QM YYTGNSC H GY EFNPPSWPS CAP+K DWI G CG D YPEEFWNCAD++ITS G P
Sbjct: 106 QTAAEGSNKYGQENSNYPVLETYAEGGILEVKIVVSTYHWGHVEMFLCDADDLPDGPDSVVTQSCFNEYPLDRAEDDEFNGPIDPLNRGRFILDPPCRASETDQELLPGAFAGDVATARFQLPQGVTCERCVVQMAYYTGNSCKHQGYAEFNPPSWPSSCAPSKADWINEAVGQCGDGDAYPEEFWNCADVSITSDGGP 304
BLAST of mRNA_H-paniculata_contig21424.5638.1 vs. uniprot
Match: D7FP25_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP25_ECTSI) HSP 1 Score: 299 bits (765), Expect = 2.530e-97 Identity = 133/200 (66.50%), Postives = 161/200 (80.50%), Query Frame = 1
Query: 1 QTQPEGENRYGQDNSVYPVLETFAEGSVVEIKVVMSTYHWGHLEIFVCNADDLPGGPDGTLTQSCFNKYPLDRATDDGDASPIDPNHPGRYFVDPPCRAAETDQSMPTGAETGEVVTARYQLPEDLTCERCTLQMVYYTGNSCHHPGYEEFNPPSWPSECAPNKEDWITLEPGI-CGGDDHYPEEFWNCADIAITSGGSP 597
+T EG NRYGQ+NS YPVLET+AEG ++E+K+V++TYHWGH+E+F+C+ADDLP GPD +TQSCFN+YPLDRA DD SPIDP + GR+ +DPPCRA+ETDQ + GA G+V TAR+QLP+ +TCERC +QMVYYTGNSC H GY EFNPPSWPS CAP+K DWI G CG D YPEEFWNCAD++ITS G P
Sbjct: 57 ETAAEGSNRYGQENSNYPVLETYAEGGILEVKIVVATYHWGHVEMFLCDADDLPDGPDSVVTQSCFNEYPLDRAEDDEFNSPIDPLNRGRFILDPPCRASETDQELLPGAFAGDVATARFQLPQGVTCERCVVQMVYYTGNSCKHQGYAEFNPPSWPSSCAPSKADWINEIVGQHCGDGDAYPEEFWNCADVSITSDGGP 256
BLAST of mRNA_H-paniculata_contig21424.5638.1 vs. uniprot
Match: D8LM92_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM92_ECTSI) HSP 1 Score: 305 bits (782), Expect = 4.620e-96 Identity = 138/215 (64.19%), Postives = 163/215 (75.81%), Query Frame = 1
Query: 1 QTQPEGENRYGQDNSVYPVLETFAEGSVVEIKVVMSTYHWGHLEIFVCNADDLPGGPDGTLTQSCFNKYPLDRATDDGDASPIDPNHPGRYFVDPPCRAAETDQSMPTGAETGEVVTARYQLPEDLTCERCTLQMVYYTGNSCHHPGYEEFNPPSWPSECAPNKEDWITLEPGICGGDDHYPEEFWNCADIAITSGGSPGPXXXXXXXXQPTIPE 645
QT E N+YG +NS YPVLET+AEG ++E K+V+STYHWGH+E+F+C+ADDLPGGPD T+TQSCFN++PLDR DD SPIDP++ GR+ +DPPCRA+ETDQ M GA G+V TAR++LP+ LTCERC +QMVYYTGNSC H GY EFNP SWPS CAP K DWI G CG D YPEEFWNCADI+ITS G P P PT PE
Sbjct: 108 QTAAEDSNKYGLENSNYPVLETYAEGGILEFKMVVSTYHWGHVEMFLCDADDLPGGPDSTVTQSCFNEHPLDRVDDDDFNSPIDPSNTGRFILDPPCRASETDQEMLDGAFPGDVATARFKLPQGLTCERCVVQMVYYTGNSCKHQGYAEFNPESWPSSCAPTKADWINEVVGHCGDGDAYPEEFWNCADISITSDGDPAPSPTTVLTPAPTAPE 322
BLAST of mRNA_H-paniculata_contig21424.5638.1 vs. uniprot
Match: A0A6H5KD35_9PHAE (CBM1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD35_9PHAE) HSP 1 Score: 288 bits (736), Expect = 5.660e-92 Identity = 127/199 (63.82%), Postives = 156/199 (78.39%), Query Frame = 1
Query: 1 QTQPEGENRYGQDNSVYPVLETFAEGSVVEIKVVMSTYHWGHLEIFVCNADDLPGGPDGTLTQSCFNKYPLDRATDDGDASPIDPNHPGRYFVDPPCRAAETDQSMPTGAETGEVVTARYQLPEDLTCERCTLQMVYYTGNSCHHPGYEEFNPPSWPSECAPNKEDWITLEPGICGGDDHYPEEFWNCADIAITSGGSP 597
QT EG N+YGQ+NS YPVLET+AEG ++E+K+V+STYHWGH+E+F+C+ADDLP GPD +TQSCFN++PLDRA DD PIDP + GR+ +DPPCRA+ETDQ + GA G+V TAR+QLP+ +TCERC +QM Y+ NSC H GY EFNPPSWP CAP+K DWI G CG D YPEEFWNCAD++ITS G P
Sbjct: 77 QTAAEGSNKYGQENSKYPVLETYAEGGILEVKIVVSTYHWGHVEMFLCDADDLPDGPDSVVTQSCFNEHPLDRAEDDEFNGPIDPLNRGRFILDPPCRASETDQELVPGAFPGDVATARFQLPQGVTCERCVVQMAYW--NSCKHQGYAEFNPPSWPGSCAPSKADWIKEAVGQCGDGDAYPEEFWNCADVSITSDGGP 273
BLAST of mRNA_H-paniculata_contig21424.5638.1 vs. uniprot
Match: D8LMF4_ECTSI (EsV-1-166 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMF4_ECTSI) HSP 1 Score: 288 bits (738), Expect = 1.470e-91 Identity = 128/200 (64.00%), Postives = 153/200 (76.50%), Query Frame = 1
Query: 1 QTQPEGENRYGQDNSVYPVLETFAEGSVVEIKVVMSTYHWGHLEIFVCNADDLPGGPDGTLTQSCFNKYPLDRATDDGDASPIDPNHPGRYFVDPPCRAAETDQSMPTGAETGEVVTARYQLPEDLTCERCTLQMVYYTGNSCHHPGYEEFNPPSWPSECAPNKEDWITLEPGICGGDDHYPEEFWNCADIAITSGGSPG 600
QT EG+N+YG++N YPVL T+AEG V+E+K+++STYHWGH+E F+C+ DLP G D +TQSCFN YPLDRA DD PIDP + GR+ +DPPCRA+ETDQ + GA G+V TARYQLPE + C+RC +QMVYYTGNSC H GY EFNP SWPS CAP+K DWI G CG D YPEEFWNCADI+ITS G PG
Sbjct: 113 QTAAEGDNKYGRENYNYPVLGTYAEGGVLEVKILVSTYHWGHVEAFLCDTADLPEGEDSIVTQSCFNDYPLDRAIDDEFNGPIDPEYKGRFILDPPCRASETDQDLVEGAYPGDVATARYQLPEGVVCDRCVVQMVYYTGNSCKHEGYAEFNPESWPSSCAPSKADWINEVVGQCGDGDAYPEEFWNCADISITSDGGPG 312
BLAST of mRNA_H-paniculata_contig21424.5638.1 vs. uniprot
Match: A0A6H5KTY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTY6_9PHAE) HSP 1 Score: 295 bits (755), Expect = 2.120e-90 Identity = 131/199 (65.83%), Postives = 158/199 (79.40%), Query Frame = 1
Query: 1 QTQPEGENRYGQDNSVYPVLETFAEGSVVEIKVVMSTYHWGHLEIFVCNADDLPGGPDGTLTQSCFNKYPLDRATDDGDASPIDPNHPGRYFVDPPCRAAETDQSMPTGAETGEVVTARYQLPEDLTCERCTLQMVYYTGNSCHHPGYEEFNPPSWPSECAPNKEDWITLEPGICGGDDHYPEEFWNCADIAITSGGSP 597
QT EG N YG +NS YPVLET+AEG ++E K+V+STYHWGH+E+F+C+A+DLPGGPD T+TQSCFN++PLDR DD SPIDP++ GR+ +DPPCRA+ETDQ + GA G+V TAR++LPE ++CERC +QMVYYTGNSC H GY EFNP SWPS CAP K DWI G CG D YPEEFWNCADI+ITS G P
Sbjct: 108 QTAAEGSNLYGLENSNYPVLETYAEGGILEFKMVVSTYHWGHVEMFLCDANDLPGGPDSTVTQSCFNEHPLDRVDDDYFNSPIDPSNTGRFILDPPCRASETDQELLDGAFPGDVATARFKLPEGVSCERCVVQMVYYTGNSCKHQGYAEFNPDSWPSSCAPTKADWINELVGFCGDGDAYPEEFWNCADISITSDGDP 306
BLAST of mRNA_H-paniculata_contig21424.5638.1 vs. uniprot
Match: D7G4D7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D7_ECTSI) HSP 1 Score: 265 bits (676), Expect = 4.180e-84 Identity = 120/201 (59.70%), Postives = 141/201 (70.15%), Query Frame = 1
Query: 1 QTQPEGENRYGQDNSVYPVLETFAEGSVVEIKVVMSTYHWGHLEIFVCNADDLPGGPDGTLTQSCFNKYPLDRATDDGDASPIDPNHPGRYFVDPPCRAAETDQSMPTGAETGEVVTARYQLPEDLTCERCTLQMVYYTGNSCHHPGYEEFNPPSWPSECAPNKEDWITLEPGICGGDDHYPEEFWNCADIAITSGGSPGP 603
Q + EG N Y N +P+L T+ EG V+EIK+ M+ YHWGH+E F+CNAD++ PDG Q CFN YPL RA D + SPIDPN+PGRY+VDP CR ETDQ+ P GA+ G V+ A YQLPE LTC+RC LQM YYTGNSC H GYEEF P SWPS CAP K DWI L+ +CG + YPEEFW CAD AIT G P
Sbjct: 85 QNEEEGANFYSTPNGDWPILNTYQEGQVLEIKLGMTAYHWGHVEFFICNADEMED-PDGIANQECFNNYPLTRAEGDDENSPIDPNYPGRYYVDPKCREGETDQTKPEGAQDGYVIHASYQLPEGLTCDRCILQMNYYTGNSCKHVGYEEFEPASWPSACAPEKHDWIELDRYLCGENGSYPEEFWACADFAITPDGMANP 284
BLAST of mRNA_H-paniculata_contig21424.5638.1 vs. uniprot
Match: A0A6H5JI36_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JI36_9PHAE) HSP 1 Score: 262 bits (669), Expect = 2.080e-81 Identity = 133/275 (48.36%), Postives = 157/275 (57.09%), Query Frame = 1
Query: 1 QTQPEGENRYGQDNSVYPVLETFAEGSVVEIKVVMSTYHW-----------------------------------------------------------------------GHLEIFVCNADDLPGGPDGTLTQSCFNKYPLDRATDDGDASPIDPNHPGRYFVDPPCRAAETDQSMPTGAETGEVVTARYQLPEDLTCERCTLQMVYYTGNSCHHPGYEEFNPPSWPSECAPNKEDWITLEPGICGGDDHYPEEFWNCADIAITS---GGSPGP 603
QT+ EG N YGQ+NS YPV ++EG ++EIK+V+STYHW GHLE F+CNA+D+ PDG +TQ CFN +PLDRA DDGDASPIDP+H GRY++DPPCRA ETDQ GA G+V TARY+LP LTC RC LQMVYYTGN+C HPGY+EF+P S P CAP KEDW+ + G+CG D YPEEFWNCADI ITS GG P P
Sbjct: 103 QTKAEGTNLYGQENSKYPVHGKYSEGGIIEIKIVVSTYHWVRELPELSAQGFICGIAYLAFLVLVAAFAVVVFVFVVEEGEWKSAPTLYAHRAYEAVPGKYRALDYVHGGSGHLEFFICNAEDM-SDPDGVVTQGCFNMHPLDRADDDGDASPIDPDHIGRYYLDPPCRAGETDQDTLPGAYPGDVATARYKLPSGLTCSRCILQMVYYTGNACKHPGYDEFDPVSVPDGCAPTKEDWVQTQLGMCGEDGRYPEEFWNCADIEITSDEDGGGPAP 376
BLAST of mRNA_H-paniculata_contig21424.5638.1 vs. uniprot
Match: D8LMS9_ECTSI (EsV-1-166 n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LMS9_ECTSI) HSP 1 Score: 243 bits (619), Expect = 2.610e-74 Identity = 115/198 (58.08%), Postives = 137/198 (69.19%), Query Frame = 1
Query: 1 QTQPEGENRYGQDNSVYPVLETFAEGSVVEIKVVMSTYHWGHLEIFVCNADDLPGGPDGTLTQSCFNKYPLDRATDDGDASPIDPNHPGRYFVDPPCRAAETDQSMPTGAETGEVVTARYQLPEDLTCERCTLQMVYYTGNSCHHPGYEEFNPPSWPSECAPNKEDWITLEPGICGGDDHYPEEFWNCADIAITSGGS 594
Q EG N Y N + L++F G V+E+ +VM+ YHWGH E FVCN DD+ PDG TQ CFN +PL RA DDGDASPIDPN+PGRY+VDP CR ET+QS + + G + RY LP D+ CE C LQMVYYTGN+C H GYEEFNP SWPS CAPNK DWI L+ +CG YPEEFW C+D ++TS GS
Sbjct: 114 QNADEGTNVYSTANINWDPLDSFTSGQVLEMDIVMNAYHWGHCEFFVCNTDDMDD-PDGVPTQECFNMHPLTRADDDGDASPIDPNYPGRYYVDPECREEETEQS--SNSIEGYNIKMRYVLP-DIECEHCILQMVYYTGNTCKHIGYEEFNPTSWPSSCAPNKWDWIELDRYVCGTRGQYPEEFWACSDFSMTSDGS 307 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21424.5638.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig21424.5638.1 >prot_H-paniculata_contig21424.5638.1 ID=prot_H-paniculata_contig21424.5638.1|Name=mRNA_H-paniculata_contig21424.5638.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=246bp QTQPEGENRYGQDNSVYPVLETFAEGSVVEIKVVMSTYHWGHLEIFVCNAback to top mRNA from alignment at H-paniculata_contig21424:673..2375+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig21424.5638.1 ID=mRNA_H-paniculata_contig21424.5638.1|Name=mRNA_H-paniculata_contig21424.5638.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1703bp|location=Sequence derived from alignment at H-paniculata_contig21424:673..2375+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig21424:673..2375+ >mRNA_H-paniculata_contig21424.5638.1 ID=mRNA_H-paniculata_contig21424.5638.1|Name=mRNA_H-paniculata_contig21424.5638.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1476bp|location=Sequence derived from alignment at H-paniculata_contig21424:673..2375+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |