prot_H-paniculata_contig2142.5634.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2142.5634.1
Unique Nameprot_H-paniculata_contig2142.5634.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length125
Homology
BLAST of mRNA_H-paniculata_contig2142.5634.1 vs. uniprot
Match: UPI00156E154D (hypothetical protein n=1 Tax=Streptomyces sp. 8P21H-1 TaxID=2737048 RepID=UPI00156E154D)

HSP 1 Score: 103 bits (257), Expect = 6.590e-26
Identity = 54/118 (45.76%), Postives = 80/118 (67.80%), Query Frame = 0
Query:    1 MEEEWGALVENGTWESEGPGRLPAGRKAIRTKWSFKRELKKDGNVARYKARIVAQGFSQVEGEDFIETSAPVAHIRTLCTVFSLATEYDFELEGMDVDVAYLNDGVEQELFVKLPPEF 118
            M+ E G++ EN  W  E    LP GRKAI+ KW FKR+   DGNV  YKAR+VA+GFSQV+G D+ ET +PVA ++++  + ++A  +D+E+  MDV  A+LN  +++EL++  P  F
Sbjct:    1 MKSEIGSMYENKVWTLEV---LPEGRKAIQNKWIFKRKTDADGNVTVYKARLVAKGFSQVQGVDYDETFSPVAMLKSVRIMLAIAAFFDYEIWQMDVKTAFLNGFLKEELYMIQPEGF 115          
BLAST of mRNA_H-paniculata_contig2142.5634.1 vs. uniprot
Match: A0A5E8C1W8_9ASCO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8C1W8_9ASCO)

HSP 1 Score: 104 bits (260), Expect = 8.280e-25
Identity = 52/115 (45.22%), Postives = 76/115 (66.09%), Query Frame = 0
Query:    4 EWGALVENGTWESEGPGRLPAGRKAIRTKWSFKRELKKDGNVARYKARIVAQGFSQVEGEDFIETSAPVAHIRTLCTVFSLATEYDFELEGMDVDVAYLNDGVEQELFVKLPPEF 118
            E  +L  NGTWE      LP GRKAI +KW FK + K DG++ RYKAR+V  GFSQVEG D+ ET APV    T+  V ++A ++ F++  MDV+ A+LN  ++++++++ P  F
Sbjct:   89 EMSSLKRNGTWELVD---LPPGRKAINSKWVFKVKRKADGSIERYKARLVCIGFSQVEGIDYTETFAPVVRYETVRIVLAIAAQFGFQVHHMDVETAFLNGDLKEDIYMRQPKGF 200          
BLAST of mRNA_H-paniculata_contig2142.5634.1 vs. uniprot
Match: A0A699J4D0_TANCI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699J4D0_TANCI)

HSP 1 Score: 106 bits (265), Expect = 1.530e-24
Identity = 55/124 (44.35%), Postives = 85/124 (68.55%), Query Frame = 0
Query:    1 MEEEWGALVENGTWESEGPGRLPAGRKAIRTKWSFKRELKKDGNVARYKARIVAQGFSQVEGEDFIETSAPVAHIRTLCTVFSLATEYDFELEGMDVDVAYLNDGVEQELFVKLPPEFSLSPET 124
            M++E  AL +NGTW  E    LP G+KAI +KW +K + K  G V RYKAR+VA+GF+Q+EG D+ ET APVA +  + T+ +++ +  +E+  +DVD A+L+  +E+E+++K+P  FS   ET
Sbjct:  117 MKKEIHALEQNGTWTLEN---LPKGKKAIDSKWVYKIKFKPSGEVERYKARLVAKGFTQIEGVDYHETFAPVAKLVKVRTLLAISMKRGWEIRQLDVDNAFLHGDLEEEVYMKIPQGFSKENET 237          
BLAST of mRNA_H-paniculata_contig2142.5634.1 vs. uniprot
Match: A0A2I0K762_PUNGR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0K762_PUNGR)

HSP 1 Score: 99.8 bits (247), Expect = 2.460e-24
Identity = 54/119 (45.38%), Postives = 79/119 (66.39%), Query Frame = 0
Query:    1 MEEEWGALVENGTWESEGPGRLPAGRKAIRTKWSFKRELKKDGNVARYKARIVAQGFSQVEGEDFIETSAPVAHIRTLCTVFSLATEYDFELEGMDVDVAYLNDGVEQELFVKLPPEFS 119
            M EE  A+  N TW  E    LP G++ I  KW FK + + DG+V RYKAR+VA+GF+Q+EG DF ET APVA + T+  + ++A    +E+  MDV  A+L+  +++E+++KLPP FS
Sbjct:    1 MAEEIQAMETNQTWTLET---LPPGKQFIDCKWVFKIKRRADGSVERYKARLVAKGFTQIEGIDFHETFAPVAKLVTVRCLLTVAVAKGWEMHHMDVQNAFLHGNLDEEVYMKLPPGFS 116          
BLAST of mRNA_H-paniculata_contig2142.5634.1 vs. uniprot
Match: A0A2I0J4E6_PUNGR (Uncharacterized protein n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0J4E6_PUNGR)

HSP 1 Score: 103 bits (256), Expect = 2.630e-24
Identity = 54/124 (43.55%), Postives = 83/124 (66.94%), Query Frame = 0
Query:    1 MEEEWGALVENGTWESEGPGRLPAGRKAIRTKWSFKRELKKDGNVARYKARIVAQGFSQVEGEDFIETSAPVAHIRTLCTVFSLATEYDFELEGMDVDVAYLNDGVEQELFVKLPPEFSLSPET 124
            M EE  AL  NGTW  E    LP G++ I  KW +K + + DG++ RYKAR+VA+GF+QVEG DF ET APVA + T+  +  +A    +E+  MDV+ A+L+  +++E++++LPP +S  P++
Sbjct:    1 MTEEIKALESNGTWTIE---HLPPGKRPIDCKWVYKIKRRADGSIERYKARLVAKGFTQVEGVDFNETFAPVAKLVTVRCLLVVAMAKGWEIHQMDVNNAFLHGDLDEEVYMRLPPGYSQRPDS 121          
BLAST of mRNA_H-paniculata_contig2142.5634.1 vs. uniprot
Match: A0A5N6NQZ3_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6NQZ3_9ASTR)

HSP 1 Score: 106 bits (264), Expect = 3.350e-24
Identity = 53/120 (44.17%), Postives = 77/120 (64.17%), Query Frame = 0
Query:    1 MEEEWGALVENGTWESEGPGRLPAGRKAIRTKWSFKRELKKDGNVARYKARIVAQGFSQVEGEDFIETSAPVAHIRTLCTVFSLATEYDFELEGMDVDVAYLNDGVEQELFVKLPPEFSL 120
            M EE  AL  N TWE      LPAG+KA+  KW+FK ++  DG + RYKAR+VA+G+SQVEG D+ ET APV+   T+  + ++A    +EL  +DV  A+LN  +++E++V  P  F +
Sbjct:  138 MHEEMEALRRNQTWELTS---LPAGKKAVGVKWTFKTKIGPDGEITRYKARLVAKGYSQVEGIDYTETFAPVSRFETIRVIIAIAAHRGWELHQLDVKTAFLNGDLDEEIYVDQPEGFEV 254          
BLAST of mRNA_H-paniculata_contig2142.5634.1 vs. uniprot
Match: A0A5N6NSI7_9ASTR (Integrase catalytic domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6NSI7_9ASTR)

HSP 1 Score: 105 bits (263), Expect = 4.820e-24
Identity = 55/124 (44.35%), Postives = 86/124 (69.35%), Query Frame = 0
Query:    1 MEEEWGALVENGTWESEGPGRLPAGRKAIRTKWSFKRELKKDGNVARYKARIVAQGFSQVEGEDFIETSAPVAHIRTLCTVFSLATEYDFELEGMDVDVAYLNDGVEQELFVKLPPEFSLSPET 124
            ME+E  AL +NGTW       LP G+KAI +KW +K + K +G V RYKAR+VA+G++Q+EG D+ +T APVA + T+ T+ +LA + D+ +  +DV+ A+L+  +E+E+++K+P  FS   ET
Sbjct:  317 MEKEIKALEQNGTWTL---AELPVGKKAIDSKWVYKVKHKPNGEVERYKARLVAKGYTQLEGVDYQDTFAPVAKLVTMRTLLALAVKRDWHIHQLDVNNAFLHGDLEEEVYMKVPQGFSNKEET 437          
BLAST of mRNA_H-paniculata_contig2142.5634.1 vs. uniprot
Match: A0A2I0JWV2_PUNGR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0JWV2_PUNGR)

HSP 1 Score: 104 bits (259), Expect = 5.670e-24
Identity = 52/118 (44.07%), Postives = 81/118 (68.64%), Query Frame = 0
Query:    1 MEEEWGALVENGTWESEGPGRLPAGRKAIRTKWSFKRELKKDGNVARYKARIVAQGFSQVEGEDFIETSAPVAHIRTLCTVFSLATEYDFELEGMDVDVAYLNDGVEQELFVKLPPEF 118
            M +E  AL +NGTW  +    LP+G+K I  KW FK + + DG V  YKAR+VA+GF+Q+EG DF ET APVA + T+C + ++A    +++  +DV+ A+L+D +++E+++ LPP F
Sbjct:  161 MADEIRALEDNGTWRIQS---LPSGKKPIGCKWVFKIKRRADGTVECYKARLVAKGFTQIEGIDFHETFAPVAKLVTVCYLLTIAIAKQWDIHQLDVNNAFLHDDLDEEVYMSLPPGF 275          
BLAST of mRNA_H-paniculata_contig2142.5634.1 vs. uniprot
Match: A0A2I0K5P2_PUNGR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0K5P2_PUNGR)

HSP 1 Score: 99.4 bits (246), Expect = 6.730e-24
Identity = 55/119 (46.22%), Postives = 79/119 (66.39%), Query Frame = 0
Query:    1 MEEEWGALVENGTWESEGPGRLPAGRKAIRTKWSFKRELKKDGNVARYKARIVAQGFSQVEGEDFIETSAPVAHIRTLCTVFSLATEYDFELEGMDVDVAYLNDGVEQELFVKLPPEFS 119
            M EE  AL  N TW  E   RLP G++ I  KW +K + + DGNV RYKAR+VA+GF+QVEG D+ E  APVA + T+  + ++A    + +  MDV+ A+L+  +E+E+++KLPP FS
Sbjct:   47 MAEEIRALELNKTWTIE---RLPPGKRPIGCKWVYKVKRRADGNVERYKARLVAKGFTQVEGIDYHEAFAPVAKLVTVRCLLTVAVAKGWYIHQMDVNNAFLHGDLEEEVYMKLPPGFS 162          
BLAST of mRNA_H-paniculata_contig2142.5634.1 vs. uniprot
Match: A0A2I0I0U1_PUNGR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0I0U1_PUNGR)

HSP 1 Score: 100 bits (250), Expect = 8.810e-24
Identity = 53/119 (44.54%), Postives = 81/119 (68.07%), Query Frame = 0
Query:    1 MEEEWGALVENGTWESEGPGRLPAGRKAIRTKWSFKRELKKDGNVARYKARIVAQGFSQVEGEDFIETSAPVAHIRTLCTVFSLATEYDFELEGMDVDVAYLNDGVEQELFVKLPPEFS 119
            M +E  AL  NGTW  E    LP G++ I  KW +K + + DG+V RYKAR+VA+GF+QVEG DF ET APVA + T+  + ++A    +E+  MDV+ A+L+  +++E++++LPP +S
Sbjct:    1 MAKEIAALESNGTWTIEY---LPPGKRPIDCKWVYKIKRRADGSVERYKARLVAKGFTQVEGVDFNETFAPVAKLVTVRCLLAVAVAKGWEIHQMDVNNAFLHGDLDEEVYMRLPPGYS 116          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2142.5634.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00156E154D6.590e-2645.76hypothetical protein n=1 Tax=Streptomyces sp. 8P21... [more]
A0A5E8C1W8_9ASCO8.280e-2545.22Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A699J4D0_TANCI1.530e-2444.35Retrovirus-related Pol polyprotein from transposon... [more]
A0A2I0K762_PUNGR2.460e-2445.38Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2I0J4E6_PUNGR2.630e-2443.55Uncharacterized protein n=1 Tax=Punica granatum Ta... [more]
A0A5N6NQZ3_9ASTR3.350e-2444.17Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5N6NSI7_9ASTR4.820e-2444.35Integrase catalytic domain-containing protein n=1 ... [more]
A0A2I0JWV2_PUNGR5.670e-2444.07Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2I0K5P2_PUNGR6.730e-2446.22Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2I0I0U1_PUNGR8.810e-2444.54Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 22..120
e-value: 7.8E-25
score: 87.9
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 1..120
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 1..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2142contigH-paniculata_contig2142:1865..2239 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2142.5634.1mRNA_H-paniculata_contig2142.5634.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2142 858..2254 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2142.5634.1 ID=prot_H-paniculata_contig2142.5634.1|Name=mRNA_H-paniculata_contig2142.5634.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=125bp
MEEEWGALVENGTWESEGPGRLPAGRKAIRTKWSFKRELKKDGNVARYKA
RIVAQGFSQVEGEDFIETSAPVAHIRTLCTVFSLATEYDFELEGMDVDVA
YLNDGVEQELFVKLPPEFSLSPET*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like