mRNA_H-paniculata_contig21359.5611.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig21359.5611.1 vs. uniprot
Match: D8LK92_ECTSI (C2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK92_ECTSI) HSP 1 Score: 198 bits (504), Expect = 4.400e-57 Identity = 99/107 (92.52%), Postives = 103/107 (96.26%), Query Frame = 1
Query: 1 KDLTRFGRARKAVKKRTKELDAGAAHLRSMLHGHLGPDFEQVISLRRMQMRVKVFLRRSLLSVYDHEEGESTAEITGIGKVVANKGGLVCKLRLKGTTLCFVSCHLQ 321
KDL+RFGRARKAVKKRTKE+DAGAAHLRSML GHLGPDFEQVISLRRMQMRVK+FLRRSLL VYDHEEGES AE TGIGKVVANKGGLVCKLRL+GTTLCFVSCHLQ
Sbjct: 108 KDLSRFGRARKAVKKRTKEMDAGAAHLRSMLSGHLGPDFEQVISLRRMQMRVKIFLRRSLLDVYDHEEGESAAENTGIGKVVANKGGLVCKLRLRGTTLCFVSCHLQ 214
BLAST of mRNA_H-paniculata_contig21359.5611.1 vs. uniprot
Match: A0A6H5KKF7_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKF7_9PHAE) HSP 1 Score: 197 bits (501), Expect = 1.620e-56 Identity = 98/107 (91.59%), Postives = 103/107 (96.26%), Query Frame = 1
Query: 1 KDLTRFGRARKAVKKRTKELDAGAAHLRSMLHGHLGPDFEQVISLRRMQMRVKVFLRRSLLSVYDHEEGESTAEITGIGKVVANKGGLVCKLRLKGTTLCFVSCHLQ 321
KDL+RFGRA+KAVKKRTKE+DAGAAHLRSML GHLGPDFEQVISLRRMQMRVK+FLRRSLL VYDHEEGES AE TGIGKVVANKGGLVCKLRL+GTTLCFVSCHLQ
Sbjct: 49 KDLSRFGRAKKAVKKRTKEMDAGAAHLRSMLSGHLGPDFEQVISLRRMQMRVKIFLRRSLLDVYDHEEGESAAENTGIGKVVANKGGLVCKLRLRGTTLCFVSCHLQ 155
BLAST of mRNA_H-paniculata_contig21359.5611.1 vs. uniprot
Match: A0A7S3Y699_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y699_HETAK) HSP 1 Score: 84.0 bits (206), Expect = 4.710e-18 Identity = 44/85 (51.76%), Postives = 60/85 (70.59%), Query Frame = 1
Query: 67 GAAHLRSMLHGHLGPDFEQVISLRRMQMRVKVFLRRSLLSVYDHEEGESTAEITGIGKVVANKGGLVCKLRLKGTTLCFVSCHLQ 321
G L++++ HLG DF V RR QM+++V++RR+L S + + AE TGIG ++ANKGGLVCKL+L TTLCFVSCHL+
Sbjct: 22 GYKRLKTIIESHLGSDFRCVGKHRRGQMQLRVYVRRALASQVSGVQID--AENTGIGHILANKGGLVCKLQLGHTTLCFVSCHLE 104
BLAST of mRNA_H-paniculata_contig21359.5611.1 vs. uniprot
Match: A0A6T5RE32_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5RE32_HETAK) HSP 1 Score: 70.9 bits (172), Expect = 4.600e-12 Identity = 39/78 (50.00%), Postives = 51/78 (65.38%), Query Frame = 1
Query: 88 MLHGHLGPDFEQVISLRRMQMRVKVFLRRSLL-SVYDHEEGESTAEITGIGKVVANKGGLVCKLRLKGTTLCFVSCHL 318
M HLGPDF + S +R M++++++R L V D E G AE TGIG ++ANKGG C L L+GT+L FVSCHL
Sbjct: 150 MFADHLGPDFVLISSSKRGFMQLRIYVRAELAPEVTDLEVG---AENTGIGGIIANKGGQACALTLRGTSLVFVSCHL 224
BLAST of mRNA_H-paniculata_contig21359.5611.1 vs. uniprot
Match: A0A7S2RZJ1_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZJ1_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 2.190e-11 Identity = 40/84 (47.62%), Postives = 52/84 (61.90%), Query Frame = 1
Query: 67 GAAHLRSMLHGHLGPDFEQVISLRRMQMRVKVFLRRSLLSVYDHEEGESTAEITGIGKVVANKGGLVCKLRLKGTTLCFVSCHL 318
G HL L LG +F + +RR+QMR++V++R SL+ D EE E AE TG V ANKGG V KL++ TT+ FVS HL
Sbjct: 149 GDKHLLRSLQAQLGSEFTLLQRVRRLQMRIRVYVRDSLMK--DIEEVEVGAENTGFAGVGANKGGQVVKLKILNTTIMFVSSHL 230
BLAST of mRNA_H-paniculata_contig21359.5611.1 vs. uniprot
Match: A0A7I4FBI4_PHYPA (C2 domain-containing protein n=4 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4FBI4_PHYPA) HSP 1 Score: 58.2 bits (139), Expect = 1.350e-7 Identity = 31/76 (40.79%), Postives = 44/76 (57.89%), Query Frame = 1
Query: 91 LHGHLGPDFEQVISLRRMQMRVKVFLRRSLLSVYDHEEGESTAEITGIGKVVANKGGLVCKLRLKGTTLCFVSCHL 318
L H G ++ V ++ R QMR+ V +R E +S +E TG+G V+ANKGG+ L+ T LCFV+CHL
Sbjct: 280 LKSHFGERYKLVHAISRGQMRLVVLVREDAEKAIS--EVDSDSEATGVGNVMANKGGVCISLKFWDTGLCFVNCHL 353
BLAST of mRNA_H-paniculata_contig21359.5611.1 vs. uniprot
Match: A0A5D6XVT6_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVT6_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 1.930e-7 Identity = 39/118 (33.05%), Postives = 66/118 (55.93%), Query Frame = 1
Query: 7 LTRFGRARKAVKKRTKELDAGAAHLRS------------MLHGHLGPDFEQVISLRRMQMRVKVFL--RRSLLSVYDHEEGESTAEITGIGKVVANKGGLVCKLRLKGTTLCFVSCHL 318
+ + RA+K+++K + + +++LR L+ HLG + V + M+MR+ V++ R ++ S+ E + TG+G V+ NKGGLV KL ++ T+LCFVSCHL
Sbjct: 1420 IVKRSRAKKSIRKVSNLVRQVSSNLRESVADALDYPFNKQLYHHLGESYGLVGKVELMEMRLFVYVHSRHTVSSI------EKISVPTGLGSVLGNKGGLVFKLVVQDTSLCFVSCHL 1531
BLAST of mRNA_H-paniculata_contig21359.5611.1 vs. uniprot
Match: A0A8K1CJL7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CJL7_PYTOL) HSP 1 Score: 57.4 bits (137), Expect = 2.480e-7 Identity = 31/73 (42.47%), Postives = 43/73 (58.90%), Query Frame = 1
Query: 100 HLGPDFEQVISLRRMQMRVKVFLRRSLLSVYDHEEGESTAEITGIGKVVANKGGLVCKLRLKGTTLCFVSCHL 318
HLG + V + ++MR+ VF+ S + E + TG+G V+ NKGGL+ KL L T+LCFVSCHL
Sbjct: 189 HLGEQYVLVAKVELLEMRLLVFVH----SKHRVSGIEKHSIATGLGSVIGNKGGLILKLVLHNTSLCFVSCHL 257
BLAST of mRNA_H-paniculata_contig21359.5611.1 vs. uniprot
Match: K3X4F6_GLOUD (C2 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X4F6_GLOUD) HSP 1 Score: 55.5 bits (132), Expect = 1.190e-6 Identity = 36/118 (30.51%), Postives = 64/118 (54.24%), Query Frame = 1
Query: 7 LTRFGRARKAVKKRTKELDAGAAHLRS------------MLHGHLGPDFEQVISLRRMQMRVKVFL--RRSLLSVYDHEEGESTAEITGIGKVVANKGGLVCKLRLKGTTLCFVSCHL 318
+ + R +K++++ +K + +A+LR L+ HLG F V + M+MR+ +++ + S+ + E TG+G V+ NKGGL+ K+ ++ T+LCFVSCHL
Sbjct: 206 IVKRSRTKKSIRRVSKLVRQVSANLRDSVAEVLDYPFNRQLYLHLGDKFALVGKVELMEMRLFMYVQTKHSVTGI------EKATVPTGLGSVLGNKGGLIFKMVVQNTSLCFVSCHL 317
BLAST of mRNA_H-paniculata_contig21359.5611.1 vs. uniprot
Match: A0A2K1L0R9_PHYPA (C2 domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L0R9_PHYPA) HSP 1 Score: 54.3 bits (129), Expect = 3.030e-6 Identity = 30/76 (39.47%), Postives = 42/76 (55.26%), Query Frame = 1
Query: 91 LHGHLGPDFEQVISLRRMQMRVKVFLRRSLLSVYDHEEGESTAEITGIGKVVANKGGLVCKLRLKGTTLCFVSCHL 318
L H G ++ V + R QMR+ V +R E +S +E TG+G V+ANKGG+ + T LCFV+CHL
Sbjct: 280 LKSHFGERYKLVHATSRGQMRLVVLVRDDAEKAIS--EVDSDSEATGVGNVMANKGGVCIAFKFWDTGLCFVNCHL 353 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21359.5611.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig21359.5611.1 >prot_H-paniculata_contig21359.5611.1 ID=prot_H-paniculata_contig21359.5611.1|Name=mRNA_H-paniculata_contig21359.5611.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=107bp KDLTRFGRARKAVKKRTKELDAGAAHLRSMLHGHLGPDFEQVISLRRMQMback to top mRNA from alignment at H-paniculata_contig21359:1560..3841+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig21359.5611.1 ID=mRNA_H-paniculata_contig21359.5611.1|Name=mRNA_H-paniculata_contig21359.5611.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2282bp|location=Sequence derived from alignment at H-paniculata_contig21359:1560..3841+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig21359:1560..3841+ >mRNA_H-paniculata_contig21359.5611.1 ID=mRNA_H-paniculata_contig21359.5611.1|Name=mRNA_H-paniculata_contig21359.5611.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=642bp|location=Sequence derived from alignment at H-paniculata_contig21359:1560..3841+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |