prot_H-paniculata_contig21303.5595.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig21303.5595.1
Unique Nameprot_H-paniculata_contig21303.5595.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length574
Homology
BLAST of mRNA_H-paniculata_contig21303.5595.1 vs. uniprot
Match: D7FYP9_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYP9_ECTSI)

HSP 1 Score: 398 bits (1023), Expect = 1.200e-125
Identity = 322/588 (54.76%), Postives = 361/588 (61.39%), Query Frame = 0
Query:   46 SKKRGLAAITPRAPPPLPDSLSMLPEFEKAKKFVGAKPGYMFTSGKTGVGYYIDRVQIGEMGDKAKARLAASVAAASAGGNASLARPT--------------------EKSSAIDGAAGMPIAKTDSAGQKRIMCKKELT-----TNEKKERSQVAVVPQQPAKVDTAVAAAATPV----------------------AKRKEARGAKGNGVLTQKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATSTEKPNGVAAEKHVDVGARKREINEKGGNXXXXXXXXXXXXXXXEDDGDGMEASKRAAVGLENDGGEGSVASEXXXXXXXXXXXXXXXXXXXXXXGNTQQE------------KASFQSLGVTGPLCEAAGQLGWTHATEIQQQALPLAFQGKDVIGLAETGSGKTGAFAIPILQALLANPQRLFAVVLAPTRELAFQINEVMEALGVGIGLKTVCIVGGIDMFQQSVALAKKPHVVIATPGRLVDHLENTKGFSLRTAKFLVLDEADRMLGMDFEEEINKILAVLPRERRTFLFSATMTSKVAKLQRASLKDPARVRMWRHLQTQKS 574
            S   G  A  PR PPPLP++LS LP+F K   F G K GY F+ GK GVGYY+DRVQIG MGDK +ARLAA++   +A G     +P                     +K S +D  AG   + +  A +K  +   +L        E K  +    V    A  D A++  A+                          R    G  G+GV   K   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       AA   +    V AE+ V    R          XXXXXXXXXXXXXXX D+   ME                     XXXX                  G  + +            KASF+SLGVTGPLCEAA QLGWTHATEIQ+QALPLAF+GKDVIGLAETGSGKTGAFA+PILQALL NPQRLFAV++APTRELAFQINEVMEALGVGIGLKTVCIVGGIDMFQQSVALA KPHVVIATPGRLVDHLENTKGFSLRTAK+LVLDEADRMLGMDFEEEINK+L+VLPRERRTFLFSATMTSKVAKLQRASLK+PARV +     T K+
Sbjct:   35 SPAAGRVAFKPRPPPPLPEALSSLPKFVKKNNFSGRKLGYFFSRGKAGVGYYVDRVQIGAMGDKLRARLAATLKPPAAAGGGEATKPAGTKTAAGPGAVNVKSPTASRDKKSPVD--AGNSSSSSSKAVEKSSVAVPKLRGDGIRAGESKRTTPAVAVKDGGAGSDEALSDGASXXXXXXXXXXXXXXXXXXXXGXGEVARSVPNGQGGSGVKAAKEEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERVSNGAAAAKADAGAKVVAERAVG-NTRGAHEXXXXXXXXXXXXXXXXXXXXXXDEXXEMEGEAXXXXXXXXXXXXXXXXXXXXXXDRGTRVRGLEKNEDNSSSGEKRPKGPEADEPPPEDIKASFESLGVTGPLCEAAAQLGWTHATEIQRQALPLAFEGKDVIGLAETGSGKTGAFALPILQALLENPQRLFAVIMAPTRELAFQINEVMEALGVGIGLKTVCIVGGIDMFQQSVALALKPHVVIATPGRLVDHLENTKGFSLRTAKYLVLDEADRMLGMDFEEEINKVLSVLPRERRTFLFSATMTSKVAKLQRASLKNPARVEVANKFSTPKT 619          
BLAST of mRNA_H-paniculata_contig21303.5595.1 vs. uniprot
Match: A0A835YP34_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP34_9STRA)

HSP 1 Score: 332 bits (851), Expect = 3.070e-100
Identity = 169/216 (78.24%), Postives = 189/216 (87.50%), Query Frame = 0
Query:  359 EKASFQSLGVTGPLCEAAGQLGWTHATEIQQQALPLAFQGKDVIGLAETGSGKTGAFAIPILQALLANPQRLFAVVLAPTRELAFQINEVMEALGVGIGLKTVCIVGGIDMFQQSVALAKKPHVVIATPGRLVDHLENTKGFSLRTAKFLVLDEADRMLGMDFEEEINKILAVLPRERRTFLFSATMTSKVAKLQRASLKDPARVRMWRHLQTQKS 574
            E+ +F SLGV  PLC+A  +LGWTHATEIQ+Q+LPLA  G+DVIGLAETGSGKT AFA+PILQALLA PQRLFA VLAPTRELAFQINEVMEALG  IGL+T C+VGGIDM  Q+VALAK+PHVVIATPGRLVDHLENTKGF+LR  KFLVLDEADRML MDFEEEINK+LAV+PRER T+LFSATMTSKVAKLQRASL+DPA+V +     T K+
Sbjct:  403 ERVTFASLGVVAPLCDAIARLGWTHATEIQRQSLPLALAGRDVIGLAETGSGKTAAFALPILQALLAAPQRLFAAVLAPTRELAFQINEVMEALGSTIGLRTACVVGGIDMVSQAVALAKRPHVVIATPGRLVDHLENTKGFNLRAIKFLVLDEADRMLSMDFEEEINKLLAVIPRERNTYLFSATMTSKVAKLQRASLRDPAKVEVAHRFTTPKT 618          
BLAST of mRNA_H-paniculata_contig21303.5595.1 vs. uniprot
Match: W7TSS5_9STRA (Dead deah box rna n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSS5_9STRA)

HSP 1 Score: 311 bits (798), Expect = 2.200e-96
Identity = 156/209 (74.64%), Postives = 180/209 (86.12%), Query Frame = 0
Query:  357 QQEKASFQSLGVTGPLCEAAGQLGWTHATEIQQQALPLAFQGKDVIGLAETGSGKTGAFAIPILQALLANPQRLFAVVLAPTRELAFQINEVMEALGVGIGLKTVCIVGGIDMFQQSVALAKKPHVVIATPGRLVDHLENTKGFSLRTAKFLVLDEADRMLGMDFEEEINKILAVLP--RERRTFLFSATMTSKVAKLQRASLKDPARV 563
            + +  +F++LGV  PLCEA   +GWT  T IQQQA+P A QG+DVIGLAETGSGKTGAFA+P+LQALLA PQRLFAVVLAPTRELAFQI+EV EALG  IGLK+ C+VGG+DM  Q++ALA+KPHVV+ATPGRLVDHLENTKGF +R A+FLVLDEADRML MDFEEEINKILA++P  + RRT LFSATMTSKVAKLQRASL DP +V
Sbjct:   30 EDDVQTFEALGVVKPLCEACAAIGWTKPTGIQQQAIPAALQGRDVIGLAETGSGKTGAFALPVLQALLAKPQRLFAVVLAPTRELAFQIHEVFEALGASIGLKSCCVVGGVDMMTQAIALARKPHVVVATPGRLVDHLENTKGFHIREARFLVLDEADRMLSMDFEEEINKILAIMPTGKHRRTLLFSATMTSKVAKLQRASLTDPVKV 238          
BLAST of mRNA_H-paniculata_contig21303.5595.1 vs. uniprot
Match: A0A812RT96_SYMMI (DDX47 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RT96_SYMMI)

HSP 1 Score: 310 bits (793), Expect = 8.590e-96
Identity = 154/218 (70.64%), Postives = 185/218 (84.86%), Query Frame = 0
Query:  357 QQEKASFQSLGVTGPLCEAAGQLGWTHATEIQQQALPLAFQGKDVIGLAETGSGKTGAFAIPILQALLANPQRLFAVVLAPTRELAFQINEVMEALGVGIGLKTVCIVGGIDMFQQSVALAKKPHVVIATPGRLVDHLENTKGFSLRTAKFLVLDEADRMLGMDFEEEINKILAVLPRERRTFLFSATMTSKVAKLQRASLKDPARVRMWRHLQTQKS 574
            ++ + +F+SLGV   LC+A   +GWT  TEIQQ A+P A +G+D+IGLAETGSGKTGAFAIPILQALL  PQRLFAV+LAPTRELAFQINEV EALG  I L++VC+VGGIDM  Q++ALAK+PH+V+ATPGRLVDHL++TKGFSLRT KFLV+DEADRML MDFEEE+N+ILAV+PRER T+LFSATMT KVAKLQ+ASL DP +V +    QT K+
Sbjct:   31 ERTEVTFKSLGVLDSLCDAINGIGWTKPTEIQQNAIPEALKGRDIIGLAETGSGKTGAFAIPILQALLQRPQRLFAVILAPTRELAFQINEVFEALGSAIALRSVCVVGGIDMMTQAIALAKQPHIVVATPGRLVDHLQHTKGFSLRTLKFLVMDEADRMLSMDFEEELNQILAVIPRERATYLFSATMTQKVAKLQKASLTDPVKVEVSNKFQTPKT 248          
BLAST of mRNA_H-paniculata_contig21303.5595.1 vs. uniprot
Match: A0A024UX28_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024UX28_9STRA)

HSP 1 Score: 306 bits (783), Expect = 2.420e-94
Identity = 157/207 (75.85%), Postives = 174/207 (84.06%), Query Frame = 0
Query:  357 QQEKASFQSLGVTGPLCEAAGQLGWTHATEIQQQALPLAFQGKDVIGLAETGSGKTGAFAIPILQALLANPQRLFAVVLAPTRELAFQINEVMEALGVGIGLKTVCIVGGIDMFQQSVALAKKPHVVIATPGRLVDHLENTKGFSLRTAKFLVLDEADRMLGMDFEEEINKILAVLPRERRTFLFSATMTSKVAKLQRASLKDPARV 563
            Q E  SF  LGV   LCE+   LGWT  ++IQQ++LP A  GKD+IGLAETGSGKTGAF IPILQ LLA+PQRLFA+VLAPTRELAFQI+E  EALG  IGLK  C+VGGIDM  Q VALAKKPHVVIATPGRLVDHLENTKGFSLRT K+LVLDEADRML MDFEEEIN+I+ ++P ERRT+LFSATMTSKVAKLQRASLK P +V
Sbjct:   25 QIEDKSFSELGVNPALCESIAALGWTRPSKIQQKSLPPALAGKDIIGLAETGSGKTGAFVIPILQDLLASPQRLFALVLAPTRELAFQISEQFEALGSSIGLKCACVVGGIDMMNQQVALAKKPHVVIATPGRLVDHLENTKGFSLRTMKYLVLDEADRMLSMDFEEEINQIIQLMPNERRTYLFSATMTSKVAKLQRASLKSPVKV 231          
BLAST of mRNA_H-paniculata_contig21303.5595.1 vs. uniprot
Match: A0A7S0SXP7_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SXP7_9STRA)

HSP 1 Score: 302 bits (774), Expect = 3.290e-93
Identity = 154/220 (70.00%), Postives = 178/220 (80.91%), Query Frame = 0
Query:  355 NTQQEKASFQSLGVTGPLCEAAGQLGWTHATEIQQQALPLAFQGKDVIGLAETGSGKTGAFAIPILQALLANPQRLFAVVLAPTRELAFQINEVMEALGVGIGLKTVCIVGGIDMFQQSVALAKKPHVVIATPGRLVDHLENTKGFSLRTAKFLVLDEADRMLGMDFEEEINKILAVLPRERRTFLFSATMTSKVAKLQRASLKDPARVRMWRHLQTQKS 574
            +   E  +F+ LGV   LCEA   +GW   T IQ  +LP A  G+D+IGLAETGSGKTGAFAIPILQALLANPQR FAVVLAPTRELAFQI+EV EALG  I L++VCIVGGIDM  Q++ LAK+PHV++ATPGRL DHL+NTKGFSLR  K+LVLDEADRML MDFEEEINKILAV+PRER T+LFSATMTSKVAKLQ+ASL +P +V +    QT K+
Sbjct:   13 SNDNENKTFKDLGVVDTLCEAIESVGWKFPTPIQLNSLPEALAGRDIIGLAETGSGKTGAFAIPILQALLANPQRFFAVVLAPTRELAFQIHEVFEALGSSIALQSVCIVGGIDMMTQAIVLAKRPHVIVATPGRLADHLQNTKGFSLRNLKYLVLDEADRMLSMDFEEEINKILAVIPRERNTYLFSATMTSKVAKLQKASLNNPVKVEVSNKFQTPKT 232          
BLAST of mRNA_H-paniculata_contig21303.5595.1 vs. uniprot
Match: G4YJE0_PHYSP (Uncharacterized protein n=21 Tax=Peronosporaceae TaxID=4777 RepID=G4YJE0_PHYSP)

HSP 1 Score: 302 bits (774), Expect = 6.080e-93
Identity = 152/202 (75.25%), Postives = 171/202 (84.65%), Query Frame = 0
Query:  362 SFQSLGVTGPLCEAAGQLGWTHATEIQQQALPLAFQGKDVIGLAETGSGKTGAFAIPILQALLANPQRLFAVVLAPTRELAFQINEVMEALGVGIGLKTVCIVGGIDMFQQSVALAKKPHVVIATPGRLVDHLENTKGFSLRTAKFLVLDEADRMLGMDFEEEINKILAVLPRERRTFLFSATMTSKVAKLQRASLKDPARV 563
            SFQ LGV   +CEA   +GW+  ++IQQQA+P    GKD+IGLAETGSGKTGAF IPILQ+LL NPQRL+A+VLAPTRELA+QI E  EALG  IGLK  C+VGGIDM QQ VALA+KPHVVIATPGRLVDHLENTKGFSLRT KFLVLDEADRML MDFEEEIN+I+ ++P ER T+LFSATMTSKV KLQRASLKDP +V
Sbjct:   32 SFQELGVDAAICEAIEAVGWSQPSKIQQQAIPHGLAGKDIIGLAETGSGKTGAFVIPILQSLLRNPQRLYALVLAPTRELAYQIGEQFEALGASIGLKCACVVGGIDMMQQQVALARKPHVVIATPGRLVDHLENTKGFSLRTMKFLVLDEADRMLSMDFEEEINQIVQLMPAERNTYLFSATMTSKVRKLQRASLKDPVKV 233          
BLAST of mRNA_H-paniculata_contig21303.5595.1 vs. uniprot
Match: A0A485KZC3_9STRA (Aste57867_13094 protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485KZC3_9STRA)

HSP 1 Score: 302 bits (774), Expect = 6.440e-93
Identity = 156/207 (75.36%), Postives = 173/207 (83.57%), Query Frame = 0
Query:  357 QQEKASFQSLGVTGPLCEAAGQLGWTHATEIQQQALPLAFQGKDVIGLAETGSGKTGAFAIPILQALLANPQRLFAVVLAPTRELAFQINEVMEALGVGIGLKTVCIVGGIDMFQQSVALAKKPHVVIATPGRLVDHLENTKGFSLRTAKFLVLDEADRMLGMDFEEEINKILAVLPRERRTFLFSATMTSKVAKLQRASLKDPARV 563
            Q E+ SF  LGV   LCE+   LGWT  ++IQQ++LP A  GKD+IGLAETGSGKTGAF IPILQ LL  PQRLFA+VLAPTRELAFQI+E  EALG  IGLK  C+VGGIDM  Q VALAKKPHVVIATPGRLVDHLENTKGFSLRT K+LVLDEADRML MDFEEEIN+I+ ++P ERRT+LFSATMTSKVAKLQRASLK P +V
Sbjct:   16 QLEEKSFLELGVDPALCESIAALGWTRPSKIQQKSLPPALAGKDLIGLAETGSGKTGAFVIPILQDLLQAPQRLFALVLAPTRELAFQISEQFEALGAAIGLKCACVVGGIDMMNQQVALAKKPHVVIATPGRLVDHLENTKGFSLRTMKYLVLDEADRMLSMDFEEEINQIIQLMPSERRTYLFSATMTSKVAKLQRASLKSPVKV 222          
BLAST of mRNA_H-paniculata_contig21303.5595.1 vs. uniprot
Match: UPI000719B3C4 (probable ATP-dependent RNA helicase DDX47 n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719B3C4)

HSP 1 Score: 301 bits (772), Expect = 8.260e-93
Identity = 153/213 (71.83%), Postives = 178/213 (83.57%), Query Frame = 0
Query:  359 EKASFQSLGVTGPLCEAAGQLGWTHATEIQQQALPLAFQGKDVIGLAETGSGKTGAFAIPILQALLANPQRLFAVVLAPTRELAFQINEVMEALGVGIGLKTVCIVGGIDMFQQSVALAKKPHVVIATPGRLVDHLENTKGFSLRTAKFLVLDEADRMLGMDFEEEINKILAVLPRERRTFLFSATMTSKVAKLQRASLKDPARVRMWRHLQT 571
            EK +F+SLGVT  LCEA  QLGW   ++IQQ++LPLA QGKDVIGLAETGSGKTGAFAIPI+QALL NPQRLF ++L PTRELAFQI+E  EALG  IG+K   IVGGIDM  Q++ LAKKPHVVIATPGRLVDHLENTKGF+LR  K+LV+DEADR+L MDFE E++KIL V+PR+R T+LFSATMT KVAKLQRASL+DP +V +    QT
Sbjct:   21 EKVTFRSLGVTDVLCEACDQLGWKTPSKIQQESLPLALQGKDVIGLAETGSGKTGAFAIPIIQALLENPQRLFGLILTPTRELAFQISEQFEALGSSIGIKCAVIVGGIDMMTQAIHLAKKPHVVIATPGRLVDHLENTKGFNLRALKYLVMDEADRILNMDFEAEVDKILKVIPRDRHTYLFSATMTKKVAKLQRASLQDPVKVEVSTKYQT 233          
BLAST of mRNA_H-paniculata_contig21303.5595.1 vs. uniprot
Match: Q6NTW0_XENLA (RNA helicase n=1 Tax=Xenopus laevis TaxID=8355 RepID=Q6NTW0_XENLA)

HSP 1 Score: 295 bits (756), Expect = 1.800e-92
Identity = 144/208 (69.23%), Postives = 177/208 (85.10%), Query Frame = 0
Query:  355 NTQQEKASFQSLGVTGPLCEAAGQLGWTHATEIQQQALPLAFQGKDVIGLAETGSGKTGAFAIPILQALLANPQRLFAVVLAPTRELAFQINEVMEALGVGIGLKTVCIVGGIDMFQQSVALAKKPHVVIATPGRLVDHLENTKGFSLRTAKFLVLDEADRMLGMDFEEEINKILAVLPRERRTFLFSATMTSKVAKLQRASLKDPAR 562
            N ++E+ +F+ LGVT  LCEA  QLGW   T+IQ +A+P+A QG+D+IGLAETGSGKTGAFA+PILQ LL +PQRL+A+VL PTRELAFQI+E  EA+G  IG+K+  IVGGIDM  QS+ALAKKPHVVIATPGRL+DHLENTKGF+LR  K+LV+DEADR+L MDFE E++KIL V+PR+R+TFLFSATMT KV KL+RA+LKDP +
Sbjct:   13 NAEEEQKTFRDLGVTDVLCEACEQLGWKQPTKIQIEAIPMALQGRDIIGLAETGSGKTGAFALPILQTLLESPQRLYALVLTPTRELAFQISEQFEAIGSSIGVKSAVIVGGIDMMSQSLALAKKPHVVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLERAALKDPVK 220          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21303.5595.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYP9_ECTSI1.200e-12554.76DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A835YP34_9STRA3.070e-10078.24P-loop containing nucleoside triphosphate hydrolas... [more]
W7TSS5_9STRA2.200e-9674.64Dead deah box rna n=3 Tax=Monodopsidaceae TaxID=42... [more]
A0A812RT96_SYMMI8.590e-9670.64DDX47 protein n=1 Tax=Symbiodinium microadriaticum... [more]
A0A024UX28_9STRA2.420e-9475.85Uncharacterized protein n=5 Tax=Aphanomyces TaxID=... [more]
A0A7S0SXP7_9STRA3.290e-9370.00Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
G4YJE0_PHYSP6.080e-9375.25Uncharacterized protein n=21 Tax=Peronosporaceae T... [more]
A0A485KZC3_9STRA6.440e-9375.36Aste57867_13094 protein n=2 Tax=Aphanomyces TaxID=... [more]
UPI000719B3C48.260e-9371.83probable ATP-dependent RNA helicase DDX47 n=1 Tax=... [more]
Q6NTW0_XENLA1.800e-9269.23RNA helicase n=1 Tax=Xenopus laevis TaxID=8355 Rep... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 328..357
NoneNo IPR availableGENE3D3.40.50.300coord: 349..566
e-value: 5.2E-84
score: 282.7
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 352..554
NoneNo IPR availablePANTHERPTHR24031:SF676ATP-DEPENDENT RNA HELICASE DDX49-RELATEDcoord: 352..554
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 380..573
e-value: 8.5E-50
score: 181.4
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 392..563
score: 30.956
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 385..552
e-value: 3.6E-47
score: 160.4
IPR000629ATP-dependent RNA helicase DEAD-box, conserved sitePROSITEPS00039DEAD_ATP_HELICASEcoord: 509..517
IPR014014RNA helicase, DEAD-box type, Q motifPROSITEPS51195Q_MOTIFcoord: 361..389
score: 8.506
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 353..563

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig21303contigH-paniculata_contig21303:424..4203 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig21303.5595.1mRNA_H-paniculata_contig21303.5595.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig21303 424..4203 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig21303.5595.1 ID=prot_H-paniculata_contig21303.5595.1|Name=mRNA_H-paniculata_contig21303.5595.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=574bp
MGRGSKSKSPRSSRRTSGGGGGYGGNHSKNGRGQQQRGRSFEPPSSKKRG
LAAITPRAPPPLPDSLSMLPEFEKAKKFVGAKPGYMFTSGKTGVGYYIDR
VQIGEMGDKAKARLAASVAAASAGGNASLARPTEKSSAIDGAAGMPIAKT
DSAGQKRIMCKKELTTNEKKERSQVAVVPQQPAKVDTAVAAAATPVAKRK
EARGAKGNGVLTQKREDGSSSDQEHQEEGGAATSESDASSEMVDEEEEEH
IGGEAAATSTEKPNGVAAEKHVDVGARKREINEKGGNEEGRREEKQDEQK
TEEDDGDGMEASKRAAVGLENDGGEGSVASESDESDGEEEENESQEEQEE
ADEGNTQQEKASFQSLGVTGPLCEAAGQLGWTHATEIQQQALPLAFQGKD
VIGLAETGSGKTGAFAIPILQALLANPQRLFAVVLAPTRELAFQINEVME
ALGVGIGLKTVCIVGGIDMFQQSVALAKKPHVVIATPGRLVDHLENTKGF
SLRTAKFLVLDEADRMLGMDFEEEINKILAVLPRERRTFLFSATMTSKVA
KLQRASLKDPARVRMWRHLQTQKS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR000629RNA-helicase_DEAD-box_CS
IPR014014RNA_helicase_DEAD_Q_motif
IPR027417P-loop_NTPase