prot_H-paniculata_contig21285.5584.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig21285.5584.1
Unique Nameprot_H-paniculata_contig21285.5584.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length275
Homology
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BLAST of mRNA_H-paniculata_contig21285.5584.1 vs. uniprot
Match: D7G2L9_ECTSI (Peptidase S16 lon domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2L9_ECTSI)

HSP 1 Score: 219 bits (559), Expect = 5.430e-63
Identity = 134/281 (47.69%), Postives = 170/281 (60.50%), Query Frame = 0 
Query:    1 RAPRIVTVLGLGFEG-----------RVQVAPALANYGTFPDLGGGGETVRKVFSLPEEQQAHFLVLSKKSA---AFGLERSLERIANLLPGGTRLAAVSSGGHSSVVSSFPAGESPLVGVCLWGDISVKEQAELACKTLGAFGLGGVRVAGNAADELFVPRTPLLTQAQEGQQHSSLDHELINLVQPPPRSASSWSPVSGTSDTSRAALASQLCVFKVDDFVFPGMRRRFYIFEPRYRALVKRCLRDGQPMLLLPSVSAGNAVGTAAWVTGLYNVQEDGR 267
            R+P+IVTVLGLGF G           RV+  P  A  G FP++ G    VR +F LP+E+Q  F +LSK      A  L+ + +R+ NLLP  TRL A+SSG  SSVVSSFPAG++P+VGVCL GDI ++EQA LA KTLGAFG   +  +G   DELFVP  P    A    + SS+  + +  VQ   R+    S               QL VFKVD+ VFPGM +RF IFEPRYRALVK+CL + +P+ +LP    GN V T A V+GL+NV+ DGR
Sbjct:  162 RSPKIVTVLGLGFHGEELAGGGGGRGRVEALPVYAEGGCFPNILGKDSVVR-IFELPKEKQPLFFMLSKDDQSVPASDLQDTNQRLGNLLPNSTRLCALSSGNPSSVVSSFPAGDAPMVGVCLTGDIPLQEQAGLARKTLGAFGFNAISASGAVCDELFVPSQP--RAAWLDPRPSSIKMDTLERVQEQVRALEQQS--RXXXXXXXXXXXXQLGVFKVDEVVFPGMTKRFRIFEPRYRALVKQCLAEDEPLAILPLSRGGNTVATTARVSGLHNVEADGR 437
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BLAST of mRNA_H-paniculata_contig21285.5584.1 vs. uniprot
Match: A0A6H5JQN4_9PHAE (Lon N-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN4_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 6.380e-19
Identity = 44/69 (63.77%), Postives = 53/69 (76.81%), Query Frame = 0 
Query:  199 QLCVFKVDDFVFPGMRRRFYIFEPRYRALVKRCLRDGQPMLLLPSVSAGNAVGTAAWVTGLYNVQEDGR 267
            QL VFKVD+ VFPGM +RF IFEPRYRALVK+CL + +P+ +LP    GN V T A V+GLYNV+ DGR
Sbjct:   34 QLGVFKVDEVVFPGMTKRFRIFEPRYRALVKQCLAEDEPLAILPLSRGGNTVATTARVSGLYNVEADGR 102
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21285.5584.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G2L9_ECTSI5.430e-6347.69Peptidase S16 lon domain protein n=1 Tax=Ectocarpu... [more]
A0A6H5JQN4_9PHAE6.380e-1963.77Lon N-terminal domain-containing protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.130.40coord: 185..274
e-value: 3.4E-8
score: 35.1
IPR015947PUA-like superfamilySUPERFAMILY88697PUA domain-likecoord: 199..272

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig21285contigH-paniculata_contig21285:1773..3837 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig21285.5584.1mRNA_H-paniculata_contig21285.5584.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig21285 1773..3837 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig21285.5584.1 ID=prot_H-paniculata_contig21285.5584.1|Name=mRNA_H-paniculata_contig21285.5584.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=275bp
RAPRIVTVLGLGFEGRVQVAPALANYGTFPDLGGGGETVRKVFSLPEEQQ
AHFLVLSKKSAAFGLERSLERIANLLPGGTRLAAVSSGGHSSVVSSFPAG
ESPLVGVCLWGDISVKEQAELACKTLGAFGLGGVRVAGNAADELFVPRTP
LLTQAQEGQQHSSLDHELINLVQPPPRSASSWSPVSGTSDTSRAALASQL
CVFKVDDFVFPGMRRRFYIFEPRYRALVKRCLRDGQPMLLLPSVSAGNAV
GTAAWVTGLYNVQEDGRYVLVQCI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015947PUA-like_sf