prot_H-paniculata_contig21099.5511.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig21099.5511.1
Unique Name	prot_H-paniculata_contig21099.5511.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	389

Homology

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BLAST of mRNA_H-paniculata_contig21099.5511.1 vs. uniprot
Match: A0A6H5L8A9_9PHAE (HTTM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L8A9_9PHAE)

HSP 1 Score: 309 bits (792), Expect = 3.440e-94
Identity = 218/410 (53.17%), Postives = 255/410 (62.20%), Query Frame = 0

Query:    1 QAVAVRINVTVVFFDLFLGVSLLAAPHYRPAGLALQTALHLSRAVTGPSNARAWHFLIAASGILFIDHNMLQETLERIQTWLQPAVSFDKGGRPRGGGTARATGGGRRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQ-------------------------------KKKQRPLQPRPSSATAALIFGYVLVQMVVPLRHLATEFPVEWSRDGQEFSWRGGGGTGGRAGSGGLVTEEALVRIVHRSRGAGRREGTAAAAAVAGDVQTVHLYGAPLTAQQVLRLVLDPDMLRQLARRTAESITTSTKSPKQADNDKAKENGNNMGPKIIRTPPYSHVDAWKSINRRPFSPWIDPTVDVWDARFGGDGPAPGDWLESPPSDDELGRAASTIEVCLV 379
            QA+A R N +++F DLFLG+SLLA+PHYRPA + LQTA+HL+ AV G  +ARAWH LI A+GILF+D   LQ  +ER+Q WLQP V      R       R  GGG RG            XXXXXXXXXXXXXXXXXXXXXXXXXX                                     KK+ PLQPRPSS  AALI  YVL+Q+++PLRH    FPVEWSR+G EFSWR GGG GGR G GGLV +E+LVR++HR RG    +G  +AAA    VQT+ LYGAPLTAQQVLRLVLDPDML Q A++TAE                A E+G     K  + P  SHVDAWKSIN RPF+ WIDP+VDVWDARF G+GP   +WL+SPP   EL RAA  +E   V
Sbjct:  298 QALATRANGSMIFLDLFLGLSLLASPHYRPAAVVLQTAVHLASAVFGRPDARAWHLLIVATGILFVDPAGLQGAVERVQAWLQPEVPRGTSAR-YAAAARRGRGGGARGVGRRQPCESRSTXXXXXXXXXXXXXXXXXXXXXXXXXXSGTDAGXXXXXXXXXXXXXXXXTGSRNSGAEGVAPPPKKKLPLQPRPSSPVAALISLYVLLQVLLPLRHALGAFPVEWSREGHEFSWRAGGGVGGRGGGGGLVRDESLVRVMHRPRGRDGGQGMGSAAA---GVQTIRLYGAPLTAQQVLRLVLDPDMLLQFAKKTAEINA-------------AAEHGQQQKGKP-QLPAASHVDAWKSINGRPFTRWIDPSVDVWDARFEGEGPPNVEWLQSPPLQAELDRAAGVMEAVRV 689

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig21099.5511.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig21099.5511.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5L8A9_9PHAE	3.440e-94	53.17	HTTM domain-containing protein n=2 Tax=Ectocarpus ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007782	Vitamin K-dependent gamma-carboxylase	PFAM	PF05090	VKG_Carbox	coord: 4..204 e-value: 1.6E-9 score: 37.2
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 53..71
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 182..388
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 163..181
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 26..52
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 72..162
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..6
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 7..25
None	No IPR available	TMHMM	TMhelix		coord: 7..29

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig21099	contig	H-paniculata_contig21099:1537..3881 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig21099.5511.1	mRNA_H-paniculata_contig21099.5511.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig21099 1537..3881 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig21099.5511.1 ID=prot_H-paniculata_contig21099.5511.1|Name=mRNA_H-paniculata_contig21099.5511.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=389bp
QAVAVRINVTVVFFDLFLGVSLLAAPHYRPAGLALQTALHLSRAVTGPSN
ARAWHFLIAASGILFIDHNMLQETLERIQTWLQPAVSFDKGGRPRGGGTA
RATGGGRRGRGRGTSSSMGEAAAAAVAAAAAGGGTAAAGSAASATSSPIA
IQKKKQRPLQPRPSSATAALIFGYVLVQMVVPLRHLATEFPVEWSRDGQE
FSWRGGGGTGGRAGSGGLVTEEALVRIVHRSRGAGRREGTAAAAAVAGDV
QTVHLYGAPLTAQQVLRLVLDPDMLRQLARRTAESITTSTKSPKQADNDK
AKENGNNMGPKIIRTPPYSHVDAWKSINRRPFSPWIDPTVDVWDARFGGD
GPAPGDWLESPPSDDELGRAASTIEVCLVVLYYVLFVL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007782	VKG_COase