prot_H-paniculata_contig21040.5500.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig21040.5500.1
Unique Name	prot_H-paniculata_contig21040.5500.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	143

Homology

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BLAST of mRNA_H-paniculata_contig21040.5500.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 1.530e-20
Identity = 47/92 (51.09%), Postives = 63/92 (68.48%), Query Frame = 0

Query:   30 SPPDDDPNFSVLNYWKPRATDGLDAS-GRVVTPARWPHVGLIARLYAGIDTTSCQAERNFSALKLVVSDLRARMSSDRVEQPVFLRLNRHLI 120
            +P  D   F+VL YW  R TD + A+ G+V +PA  P++  IARLY GI+ TSCQAERNFSAL  ++  LR  M   +VE+ +F+RLNRHL+
Sbjct:  520 NPQLDVDGFNVLGYWNRRGTDSVSATTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNFSALAHLIGQLRCNMLPSKVERMMFIRLNRHLV 611

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BLAST of mRNA_H-paniculata_contig21040.5500.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 1.590e-20
Identity = 47/92 (51.09%), Postives = 63/92 (68.48%), Query Frame = 0

Query:   30 SPPDDDPNFSVLNYWKPRATDGLDAS-GRVVTPARWPHVGLIARLYAGIDTTSCQAERNFSALKLVVSDLRARMSSDRVEQPVFLRLNRHLI 120
            +P  D   F+VL YW  R TD + A+ G+V +PA  P++  IARLY GI+ TSCQAERNFSAL  ++  LR  M   +VE+ +F+RLNRHL+
Sbjct:  715 NPQLDVDGFNVLGYWNRRGTDSVSATTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNFSALAHLIGQLRCNMLPSKVERMMFIRLNRHLV 806

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BLAST of mRNA_H-paniculata_contig21040.5500.1 vs. uniprot
Match: A0A6H5KJT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJT6_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 1.490e-18
Identity = 41/85 (48.24%), Postives = 59/85 (69.41%), Query Frame = 0

Query:   37 NFSVLNYWKPRATDGL-DASGRVVTPARWPHVGLIARLYAGIDTTSCQAERNFSALKLVVSDLRARMSSDRVEQPVFLRLNRHLI 120
            +F+VL +W  R TD +   +G V +PA  P++  IARL+ GI+ +SCQAERNFSAL  ++  LR  M S +VE+ + +RLNRHL+
Sbjct:  145 DFNVLGFWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEASSCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLV 229

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BLAST of mRNA_H-paniculata_contig21040.5500.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 2.970e-18
Identity = 44/91 (48.35%), Postives = 63/91 (69.23%), Query Frame = 0

Query:   31 PPDDDPNFSVLNYWKPRATDGLDAS-GRVVTPARWPHVGLIARLYAGIDTTSCQAERNFSALKLVVSDLRARMSSDRVEQPVFLRLNRHLI 120
            P  D  +F++L +W  R TD + A+ G+V +PA  P++  IARL+ GI+ TSCQAERNFSAL  ++ DL   M S RVE+ + +RLN+HL+
Sbjct:  517 PQVDVDDFNLLGFWNRRGTDSVSAATGKVTSPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGDLCCNMLSHRVERMMLVRLNKHLL 607

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BLAST of mRNA_H-paniculata_contig21040.5500.1 vs. uniprot
Match: A0A6H5L7P7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7P7_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 6.630e-18
Identity = 42/87 (48.28%), Postives = 59/87 (67.82%), Query Frame = 0

Query:   31 PPDDDPNFSVLNYWKPRATDGLDAS-GRVVTPARWPHVGLIARLYAGIDTTSCQAERNFSALKLVVSDLRARMSSDRVEQPVFLRLN 116
            P  D  +F++L +W  R TD + A+ G+V +PA  P++  IARL+ GI+ TSCQAERNFSAL  ++ D R  M S RVE+ + +RLN
Sbjct:  134 PQVDVDDFNLLGFWNRRGTDSVSAATGKVTSPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGDFRCNMLSHRVERMMLVRLN 220

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BLAST of mRNA_H-paniculata_contig21040.5500.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 1.060e-17
Identity = 41/85 (48.24%), Postives = 59/85 (69.41%), Query Frame = 0

Query:   37 NFSVLNYWKPRATDGL-DASGRVVTPARWPHVGLIARLYAGIDTTSCQAERNFSALKLVVSDLRARMSSDRVEQPVFLRLNRHLI 120
            +F+VL +W  R TD +   +G V +PA  P++  IARL+ GI+ +SCQAERNFSAL  ++  LR  M S +VE+ + +RLNRHL+
Sbjct:  710 DFNVLGFWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEASSCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLV 794

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BLAST of mRNA_H-paniculata_contig21040.5500.1 vs. uniprot
Match: A0A6H5KDJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ6_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 5.480e-16
Identity = 40/91 (43.96%), Postives = 60/91 (65.93%), Query Frame = 0

Query:   31 PPDDDPNFSVLNYWKPRATDGL-DASGRVVTPARWPHVGLIARLYAGIDTTSCQAERNFSALKLVVSDLRARMSSDRVEQPVFLRLNRHLI 120
            P  D   F+++ +W  R T+ +   +G+V  PA  P++  IARL+ GI+ TSCQAERNFSAL  ++  LR  M + +VE+ + +RLNRHL+
Sbjct:  399 PQVDVDGFNLVGFWNRRGTNSVCPTTGKVTAPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGTLRCNMLARKVERMMLIRLNRHLL 489

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BLAST of mRNA_H-paniculata_contig21040.5500.1 vs. uniprot
Match: A0A6H5JXV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV5_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 5.540e-16
Identity = 39/84 (46.43%), Postives = 59/84 (70.24%), Query Frame = 0

Query:   38 FSVLNYWKPRATDGLDAS-GRVVTPARWPHVGLIARLYAGIDTTSCQAERNFSALKLVVSDLRARMSSDRVEQPVFLRLNRHLI 120
            F+++ +W  R TD + A+ G+V +PA  P++  IARL+ GI+ TSCQAERNFSAL  ++ +LR  M   RVE+ + +RLNR ++
Sbjct:  420 FNLIGFWNRRGTDSVRAATGQVTSPADMPYLAFIARLHLGIEATSCQAERNFSALAHLIGNLRCNMLPHRVERMMLIRLNRRML 503

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BLAST of mRNA_H-paniculata_contig21040.5500.1 vs. uniprot
Match: A0A6H5KAN7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN7_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 1.860e-15
Identity = 43/91 (47.25%), Postives = 61/91 (67.03%), Query Frame = 0

Query:   31 PPDDDPNFSVLNYWKPRATDGLDASGRVVTPARWPHVGLIARLYAGIDTTSCQAERNFSALKLVVSDLRARMSSDRVEQPVFLRLNRHLIP 121
            P +++ +FS+L +W+ R+     A    V P   PH+ LIARL+ GI++TSCQAERNFSAL  ++  LR+ M   +VE+ +FLRLNR  IP
Sbjct:  379 PAEEEYDFSLLEFWQRRSKPRTCAETGEVEPGL-PHLALIARLFHGIESTSCQAERNFSALAFLIGSLRSSMLPGKVERLMFLRLNRLYIP 468

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BLAST of mRNA_H-paniculata_contig21040.5500.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 2.060e-15
Identity = 43/91 (47.25%), Postives = 61/91 (67.03%), Query Frame = 0

Query:   31 PPDDDPNFSVLNYWKPRATDGLDASGRVVTPARWPHVGLIARLYAGIDTTSCQAERNFSALKLVVSDLRARMSSDRVEQPVFLRLNRHLIP 121
            P +++ +FS+L +W+ R+     A    V P   PH+ LIARL+ GI++TSCQAERNFSAL  ++  LR+ M   +VE+ +FLRLNR  IP
Sbjct:  707 PAEEEYDFSLLEFWQRRSKPRTCAETGEVEPGL-PHLALIARLFHGIESTSCQAERNFSALAFLIGSLRSSMLPGKVERLMFLRLNRLYIP 796

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig21040.5500.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig21040.5500.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13


Match Name	E-value	Identity	Description
A0A6H5JTB8_9PHAE	1.530e-20	51.09	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5JGG8_9PHAE	1.590e-20	51.09	Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ec...	[more]
A0A6H5KJT6_9PHAE	1.490e-18	48.24	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JQI6_9PHAE	2.970e-18	48.35	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L7P7_9PHAE	6.630e-18	48.28	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5JRT6_9PHAE	1.060e-17	48.24	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KDJ6_9PHAE	5.480e-16	43.96	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JXV5_9PHAE	5.540e-16	46.43	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KAN7_9PHAE	1.860e-15	47.25	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5KJ52_9PHAE	2.060e-15	47.25	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008906	HAT, C-terminal dimerisation domain	PFAM	PF05699	Dimer_Tnp_hAT	coord: 25..114 e-value: 2.0E-5 score: 24.3
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 32..119

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig21040	contig	H-paniculata_contig21040:867..1335 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig21040.5500.1	mRNA_H-paniculata_contig21040.5500.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig21040 867..1855 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig21040.5500.1 ID=prot_H-paniculata_contig21040.5500.1|Name=mRNA_H-paniculata_contig21040.5500.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=143bp
RPENDDISGEAETREEACLGGFAEYTKEASPPDDDPNFSVLNYWKPRATD
GLDASGRVVTPARWPHVGLIARLYAGIDTTSCQAERNFSALKLVVSDLRA
RMSSDRVEQPVFLRLNRHLIPGLGKAMKELGNLKRERIQASE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008906	HATC_C_dom
IPR012337	RNaseH-like_sf