|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | signal peptide |
| Exons | 4 |
| Model size | 2803 |
| Cds size | 1425 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10860.549.1 >prot_H-paniculata_contig10860.549.1 ID=prot_H-paniculata_contig10860.549.1|Name=mRNA_H-paniculata_contig10860.549.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=475bp
MSCPALPSAWLRLVPLLLVAAVSAQNHGDVTCEKPTDPKGVAVHDSGALY
VLDPGQGVIHEFNGTDGQYMRMLTTSIGAAAGGLTVFGDSLYVSPASETD
GTVEVISVGDSGVTMKLPDQGETVARGGYDVAVDANGTVYVSNYLDVGVR
VYNGTTGDYLGDTIEDMNVLGLAFGPDDILYATVPADDSVKRYERSSDGT
NFTLIDAPITGLGGSRNREGVWGIAVNQKNYMIYVVWSGSQEVTGYDSQL
QEMNWWGIGTIKTWWTSDPDSSVSTETSVSNGWTNAGSNSSNLTPWFVTT
DTVGDIYVTASDESANGLDGDVFKYDGETNVVIGRLSNCLGAGANPTDLP
TPSPSIAPTHSHVTAGANRTELPTPSPSITPTLSRVAAGMNWTELPTPSP
TVFGQTAGPTAVGSDASDGTVDVDDDKEDETDDGEDDDDVARTVASGACR
TGGIGMSVEFFLGLAVVSTLVGIF* back to topmRNA from alignment at H-paniculata_contig10860:726..6828- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig10860.549.1 ID=mRNA_H-paniculata_contig10860.549.1|Name=mRNA_H-paniculata_contig10860.549.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6103bp|location=Sequence derived from alignment at H-paniculata_contig10860:726..6828- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAAATCGCCTACAGCGAGCAATCTTCAGGTGTGCGTCCCTTGTCGCGTGG
AGTGAAGGCTGTTGCTGCTTACTGTGTTCATCCTACGCTGCCGGACAACG
AGACAGGAAGCCGTCAGACTAACGTGAGAGAAAGTCTGGCGTATATGTTG
GGTGAATGGCATGGTACTTTTCGTCATATGCGTGTGTTGAATTGTTCTGC
AATGTGAGAAGAGACCATTACATGGTTCACACAGCGAAAACAGTTGTAAA
TGAATACATGCACCTGGCGTGGTGAAAGGTGTATGTGCGCCGCAGTAGGT
TGTTTTCGTCGTGTACCAGCCTCAAGCGACTCGTGTCCGTGGGCTACAGC
AGTCATGTCCTTCTGTTCTGGACCTGATAGGTTGATCTCACTTCTAGTGA
CTGCACCGACGTGCGCTGACACTCAGCGGTAGCCGACAAGATATCAATCG
GAACAAAATCTCGACTGTCACAGTTCTTGTCAACGCGATGAAACAAACCG
AAAGGCCGTTGGAAACTACACAGCAGTCATGGTTAGATGCTATTTCGAGG
CTCAAAAGGCATCTGAGCTAACGAAAACCAGATGAGTGATGAGTAGACCA
GTTCATAGTATACTGTACTGTAATAATCTGGGTTCTCTACGCGCAATCAC
GTCTCACGAATATTTTTATGTCAGTGTTGAGTAGATAGTCCTTCCCCGAT
GGTACGATGGTGGAACATTCACAGCTAGCAGGTTGCGGAAGCATGGCCAT
ACAAAAGCATGCGCAATCTCCACAACTGATGAGGTAGAGTAAAAAACGTT
GGACGACACAGACAAGTCTCGGATCTGCACAGCTACGAAGAACACAGATG
TTGTATGGCGTTTTCTCGTTGTACGCACCATGTCCTAATGGCGATTGCCA
TGTTCGGATACCGGTAGCTGCCATCGAACATATAGTCGATGTTCCAAAGT
CGGTTTGGTGATTTTTAGTCGCTTATCCGCCATCACACATAACATGGCGT
ATTTGGCCAACTTGGTTGGTAATTGATTATTTATTAGTGTGATGTCAAAG
TAGTTCCGCTTCGTGTGTCACTTGGGTAGTGAATGGTTGCGAAAAATCAC
ACGTGCGAGCGTTGGTAACATGAAATGGGTTATCATTCTAGTTTAATCTG
AACCATTTTTGTTTTTAGTTTGAAGACATTCCTTCAGCCATCAACTGTAG
CTTGAAAATTTCGAAATTTCATCGTCGAATGCATGATTTATCATGCAGAT
CGACACTGTATCTCAAGGAGATGCTATTGATTTTGCCGGCTATCATACTT
CGGAAATTGCACATTGTCATCAGCTGTGTGATTTCCCTAAAAGGCCCTAC
TGAAAAAGGATTAGACAGGCTAGGGAATAACAAGAACTGAAATGCTTTCA
AAACTGTGAGCAATTCAATTCTATGCAGGTGAGGGTACAGGTCCGGGATT
TGTAAACATCTTTTATTGAGGTACGAGTTCAGAGCGACACTGCCCCCTAG
ATATGGAAGGTAATGGGAGGCGTCAAGAGTCATACGAGATGATATTAGAC
GATGAGTCCGGCCTGTAAGGAATCTTCGATGTTAACGTTTTTTCGCGTGG
GGTTTAGAAGCGAGCGTTGCATCTTATGCCCCTCTCTCACCAGCGAGGTA
AAACTCCTTCGTGGTCGTGAGATGTGTCAATGATGGTAATTGCCATTGAA
CTGGCCGGATTGATGAATAGTTTTAGTGTTTCTTTGTACTACTGCGACAC
CACTTGCGCAATAAAGTAAAGCCGGAAATTGGTGGGGATATCGAACAATA
CCATATTAAATTGGATATCATAGTTTCCTGGAAATGAAATGATATTGCCA
ACTTGGTTTTGATTAATATTGTAGGGGTTGAGCAAAACGAAAGAGATGAA
CGGATGTGCTACAGTATTGAACCGTACCACATTTTTGCTCACTGTTGAGC
CTTGGGGCTACCCCAATGTACATGAGAGGTCGGGGCATGTTTAGCCGAGT
CATGTGTAGCCTGTACTGACTAGTACTGCTCTCAACTGACCGAGACATGT
TTTTCCATTCCGCCAGCGTTTATAACCTCTTGAAATATTTCTTGAAATCA
TTTTTCCTTGGAAGAAGCGTCGTGTCGGCTTTTTCGATGTGTCCTTGGAA
AGGAAAATAACGGACCGGAAGTATTGTACATTCTTGATACAAACAACAGA
TGTTGCAGGTTTTTACCCTGATTTAGCCTTCTATTAGGCATTAAGAGACC
TTGTGCCAAACTATTGCAACTGATGTTTCGGTGAAGTTCTCACGTATCTC
CTTCCTTCCCTCACGTACACTCGCGTTGTGGCTCTCCGTGTCTTTTTTAC
TGTTATGCTGGAAAATCATGTTTTCACCAGTGACAATGAGTTGTCCTGCC
CTTCCGTCGGCGTGGCTTCGCCTCGTGCCGCTGCTCCTAGTTGCGGCGGT
AAGCGCCCAAAACCATGGCGATGTAACATGCGAAAAGCCCACAGATCCCA
AGGGTGTCGCGGTGCACGACAGCGGTGCTCTTTATGTGCTTGATCCGGGA
CAGGGTGTGATACATGAGTTCAACGGTACTGACGGTCAATACATGCGTAT
GTTAACCACTTCGATCGGGGCTGCTGCTGGTGGGTTGACAGTTTTTGGTG
ACTCCTTGTACGTGTCCCCAGCTTCTGAAACCGACGGCACGGTGGAAGTG
ATTTCCGTTGGTGACAGTGGAGTAACGATGAAGTTACCTGACCAAGGCGA
GACAGTTGCTCGCGGGGGCTATGACGTCGCGGTGGACGCGAACGGGACCG
TGTACGTGTCGAACTACCTAGATGTTGGTGTGCGAGTGTACAACGGCACG
ACTGGCGACTATCTCGGGGATACCATCGAGGATATGAATGTGTTGGGGCT
TGCGTTTGGTCCCGATGATATTCTTTATGCCACGGTTCCCGCTGATGATT
CGGTGAAGAGATATGAAAGGTGAGCGTGAGGATCGAGTCTCGTGAGTACG
GTGATGTCATTAGTCTAGAAAGAAGGGGTGATGTAAAAGATTCGGTGCAA
TTATTCCATGCATCCGGGTTGTACATGATGGAATATATGGTCTCCTCGAA
GGCAAGGGAACAGGTTGGTTTAGCTCGGGCTCAAGGTGCCACAAAATTCT
TTGGAACTCATTTGGTAAAGTTCCCGTGAGCGAAATTTTTGACATGAGTA
CTTTGAACGAGAAGGGCCAGGCGGAAAGAGCGAAACGTCAGCTGTCACCG
AGTGGGTCTAAGTGCTCCCTTAAAGGGTCGTGACGGGTCACGTTCATGCA
TGTGATGTTTCGTTCCATTCGGGGCACCTGCGGGGGCCTCGGCACAAAGC
GACAGTTCGGCGTATAATGTGATATTTGTGGAGAGTAGCATGAAAGCTGA
CTTACAGCTTCGGAAAGGGGGACCTGCATATTTTATTCCTAAAGTAACGA
AGCTAAGTCCAATTATCCCTCCGGTTCCCCATTTTTCGATTGCCTGTCAT
GACTCAGGTCGTCGGACGGCACCAACTTCACGCTAATCGACGCTCCGATC
ACAGGTCTAGGGGGGTCACGTAACCGTGAAGGGGTTTGGGGTATAGCCGT
AAACCAGAAGAACTACATGATTTACGTGGTTTGGTCAGGTTCCCAAGAAG
TGACGGGGTACGACTCGCAATTGCAGGAGATGAACTGGTGGGGTATTGGA
ACGATCAAGACCTGGTGGACTTCTGATCCCGACTCGTCTGTCAGCACTGA
AACCTCTGTGTCTAACGGATGGACTAACGCGGGGAGCAACAGTTCTAACC
TGACACCGTGGTTTGTCACCACTGATACGGTCGGTGACATCTACGTAACT
GCGTCTGATGAGTCGGCGAATGGGCTAGACGGGGATGTGTTCAAGTACGA
TGGCGAAACGAATGTAGTGATTGGGAGGCTGTCCAATTGCTTGGGAGGTG
AGATATAGGACGGGTAGGAAAGAGGTGTGTCGCGTGTATCGTAGCGTTTA
TGTGCTCCAAATCAACTAAGGTGAAGGTTGCCTTGATGGGTGTTGTATTT
GTGGTACAGCACCAAACATAGATCCCCCAACGCACAAAATTGAACGTCTC
GTTCTTGCGAAGAGACAAATTATTTTTTGGTGAATATCTACGTGAAATAG
ATATGAGAAACTGGTTCATCCGTTATGTCAACGTCTCTTCAACAGATTTG
TAAACCAAACACCTTTCAAATAAACCACGACCTGTCTGAAATATTTCGCA
CATCCAGGAACAGCCTGAAAAGAAAAGTGTACATGGAACCCCAAAGACGT
GAATTTCTTGACAACGCACATAAGAATTTATGGCAGCACAAGATGGATAT
TTGTTTTATGGAAGCGGATTGATGTTGACCAGGATGCCAATCTGAGAAGG
TATTTGCCCTCAATTTGATAGTGCACGCCACCCTCTTGTTCACATTCTAC
AGCGGGGGCGAATCCGACGGATCTTCCGACCCCAAGCCCTTCTATTGCAC
CCACTCATTCACATGTTACAGCGGGGGCGAATCGGACGGAACTTCCGACC
CCAAGCCCTTCTATTACACCCACTCTTTCACGTGTTGCAGCGGGGATGAA
TTGGACGGAACTTCCGACCCCAAGCCCCACCGTGTTCGGACAAACTGCTG
GTCCCACAGCCGTCGGGTCGGATGCGAGCGATGGCACTGTAGATGTCGAC
GATGACAAAGAGGATGAGACCGACGACGGAGAAGACGATGACGATGTAGC
TAGAACGGTCGCAAGTGGAGCCTGTCGGACTGGCGGAATAGGGATGTCCG
TTGAGTTTTTCCTCGGACTAGCGGTGGTGTCGACGCTGGTTGGTATCTTC
TAGGGACGATGTCTAATGTTGGAAGCATCAGTCTCGACTCTTCCTACGGA
GAAGCAAGTCATGAACAATTTTGGTACCGCGAATATTTTATGGTATTGAA
TATGTACATGTATTCCCGAGTTGGCGGCAGAGGATGAGAGGCCGTGCTTG
GAGGGGGGGTTGGAGACATGAACCTTCGGCCCTCTTTCCATTGGGAGGAA
ACGAACCGTTGCTGGAGCGATTTTTGTTTCATTTATACGACAGCCGAGAA
GGCTGTTGGACCGTACTTCGTATATAGCGTAATTTACAGCATATGTGCCT
CATCTAGGGGGTAGAGGGGAGTTGCCTTTGATAACTCACCTGCTATTTTG
AGTGTAGGCAAGAAACATGAGGGTAATGTAATGAACGCGGCTGGAAGTTA
CTTGAGCATTATTTCCTTCATGGGAAGGTTGATGTGTCCAAGTTCCGGTT
TCGCCACACCTCGCGGTGTGGCAGAGTTCCATACATGGTCCGCTTGTAGC
TTGCCATAATTAGGTCTGTGTGGCGCTGTGCTACAGTATTATCGTCTCAG
GTTTGGGTGTCCTTATGTTGGAAGACCATGGCAAGTTTCTGGTGATGTGT
TGGTCTTCGTTTCTCCCCGAGGAATGTTTTATATTTGAGCATGAATACGG
GGTATGGATTTTCCCTCGTTAATGCGAAACACGTACACTAATGATTGGAT
GGCTTCCTTGGTGACGAGTGATATTGATCCGCATGCATTTAAGGTATCAT
TTGCAGTAGACAGCAGTTCTCGAGAATCCAACTTGATATTGATTCACACG
AGAGGCATACAGTAAACGTGAGTAGGGAAGGGAAAAGGAAGAGTTGGGGC
AGATCGATTGCTTCCTCGCTCCGCCTAGTTGTACTTTTAATGTGGGCAAG
TGTTAGACCGCATCGTAGGTGTTGTAGTTATTCTCGGTGTTTGCGTAGTT
GAAGTTCACTGCGAGTTTTGACTAATGGCTCCCCTTACTGTATGTAATGT
AGGGATGGGGAATCGTAATCCAATATTTGTAAACTACTCTCGCTACTGCA
GCTCATCACGTGACAAGATGGAGGAATTGCGCTTGCGAGCGCCCGGTGCC
CACCGGACAGTACCGTAATTCCCGGCTGGGTTTCCAGTGTACGCGAGTTC
TACGCAGAGGCGTGAAACCTGATCATACCGTAGCTGTGATGGGTCATGAA
GGATGACAAATACTCGTCAGTGTTGCTAAGAAGTTGCAACGCATAAAAGT
TAG back to topCoding sequence (CDS) from alignment at H-paniculata_contig10860:726..6828- >mRNA_H-paniculata_contig10860.549.1 ID=mRNA_H-paniculata_contig10860.549.1|Name=mRNA_H-paniculata_contig10860.549.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2850bp|location=Sequence derived from alignment at H-paniculata_contig10860:726..6828- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGTTGTCCTGCCCTTCCGTCGGCGTGGCTTCGCCTCGTGCCGCTGCT
CCTAGTTGCGGCGGTAAGCGCCCAAAACCATGGCGATGTAACATGCGAAA
AGCCCACAGATCCCAAGGGTGTCGCGGTGCACGACAGCGGTGCTCTTTAT
GTGCTTGATCCGGGACAGGGTGTGATACATGAGTTCAACGGTACTGACGG
TCAATACATGCGTATGTTAACCACTTCGATCGGGGCTGCTGCTGGTGGGT
TGACAGTTTTTGGTGACTCCTTGTACGTGTCCCCAGCTTCTGAAACCGAC
GGCACGGTGGAAGTGATTTCCGTTGGTGACAGTGGAGTAACGATGAAGTT
ACCTGACCAAGGCGAGACAGTTGCTCGCGGGGGCTATGACGTCGCGGTGG
ACGCGAACGGGACCGTGTACGTGTCGAACTACCTAGATGTTGGTGTGCGA
GTGTACAACGGCACGACTGGCGACTATCTCGGGGATACCATCGAGGATAT
GAATGTGTTGGGGCTTGCGTTTGGTCCCGATGATATTCTTTATGCCACGG
TTCCCGCTGATGATTCGGTGAAGAGATATGAAAGATGAGTTGTCCTGCCC
TTCCGTCGGCGTGGCTTCGCCTCGTGCCGCTGCTCCTAGTTGCGGCGGTA
AGCGCCCAAAACCATGGCGATGTAACATGCGAAAAGCCCACAGATCCCAA
GGGTGTCGCGGTGCACGACAGCGGTGCTCTTTATGTGCTTGATCCGGGAC
AGGGTGTGATACATGAGTTCAACGGTACTGACGGTCAATACATGCGTATG
TTAACCACTTCGATCGGGGCTGCTGCTGGTGGGTTGACAGTTTTTGGTGA
CTCCTTGTACGTGTCCCCAGCTTCTGAAACCGACGGCACGGTGGAAGTGA
TTTCCGTTGGTGACAGTGGAGTAACGATGAAGTTACCTGACCAAGGCGAG
ACAGTTGCTCGCGGGGGCTATGACGTCGCGGTGGACGCGAACGGGACCGT
GTACGTGTCGAACTACCTAGATGTTGGTGTGCGAGTGTACAACGGCACGA
CTGGCGACTATCTCGGGGATACCATCGAGGATATGAATGTGTTGGGGCTT
GCGTTTGGTCCCGATGATATTCTTTATGCCACGGTTCCCGCTGATGATTC
GGTGAAGAGATATGAAAGGTCGTCGGACGGCACCAACTTCACGCTAATCG
ACGCTCCGATCACAGGTCTAGGGGGGTCACGTAACCGTGAAGGGGTTTGG
GGTATAGCCGTAAACCAGAAGAACTACATGATTTACGTGGTTTGGTCAGG
TTCCCAAGAAGTGACGGGGTACGACTCGCAATTGCAGGAGATGAACTGGT
GGGGTATTGGAACGATCAAGACCTGGTGGACTTCTGATCCCGACTCGTCT
GTCAGCACTGAAACCTCTGTGTCTAACGGATGGACTAACGCGGGGAGCAA
CAGTTCTAACCTGACACCGTGGTTTGTCACCACTGATACGGTCGGTGACA
TCTACGTAACTGCGTCTGATGAGTCGGCGAATGGGCTAGACGGGGATGTG
TTCAAGTACGATGGCGAAACGAATGTAGTGATTGGGAGGCTGTCCAATTG
CTTGGGAGGTCGTCGGACGGCACCAACTTCACGCTAATCGACGCTCCGAT
CACAGGTCTAGGGGGGTCACGTAACCGTGAAGGGGTTTGGGGTATAGCCG
TAAACCAGAAGAACTACATGATTTACGTGGTTTGGTCAGGTTCCCAAGAA
GTGACGGGGTACGACTCGCAATTGCAGGAGATGAACTGGTGGGGTATTGG
AACGATCAAGACCTGGTGGACTTCTGATCCCGACTCGTCTGTCAGCACTG
AAACCTCTGTGTCTAACGGATGGACTAACGCGGGGAGCAACAGTTCTAAC
CTGACACCGTGGTTTGTCACCACTGATACGGTCGGTGACATCTACGTAAC
TGCGTCTGATGAGTCGGCGAATGGGCTAGACGGGGATGTGTTCAAGTACG
ATGGCGAAACGAATGTAGTGATTGGGAGGCTGTCCAATTGCTTGGGAGCG
GGGGCGAATCCGACGGATCTTCCGACCCCAAGCCCTTCTATTGCACCCAC
TCATTCACATGTTACAGCGGGGGCGAATCGGACGGAACTTCCGACCCCAA
GCCCTTCTATTACACCCACTCTTTCACGTGTTGCAGCGGGGATGAATTGG
ACGGAACTTCCGACCCCAAGCCCCACCGTGTTCGGACAAACTGCTGGTCC
CACAGCCGTCGGGTCGGATGCGAGCGATGGCACTGTAGATGTCGACGATG
ACAAAGAGGATGAGACCGACGACGGAGAAGACGATGACGATGTAGCTAGA
ACGGTCGCAAGTGGAGCCTGTCGGACTGGCGGAATAGGGATGTCCGTTGA
GTTTTTCCTCGGACTAGCGGTGGTGTCGACGCTGGTTGGTATCTTCTAGC
GGGGGCGAATCCGACGGATCTTCCGACCCCAAGCCCTTCTATTGCACCCA
CTCATTCACATGTTACAGCGGGGGCGAATCGGACGGAACTTCCGACCCCA
AGCCCTTCTATTACACCCACTCTTTCACGTGTTGCAGCGGGGATGAATTG
GACGGAACTTCCGACCCCAAGCCCCACCGTGTTCGGACAAACTGCTGGTC
CCACAGCCGTCGGGTCGGATGCGAGCGATGGCACTGTAGATGTCGACGAT
GACAAAGAGGATGAGACCGACGACGGAGAAGACGATGACGATGTAGCTAG
AACGGTCGCAAGTGGAGCCTGTCGGACTGGCGGAATAGGGATGTCCGTTG
AGTTTTTCCTCGGACTAGCGGTGGTGTCGACGCTGGTTGGTATCTTCTAG back to top
|