prot_H-paniculata_contig10860.549.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig10860.549.1
Unique Nameprot_H-paniculata_contig10860.549.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length475
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10860.549.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 19..253
e-value: 1.4E-11
score: 46.2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..474
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.887
NoneNo IPR availableSUPERFAMILY63825YWTD domaincoord: 36..249

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10860contigH-paniculata_contig10860:1976..4443 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10860.549.1mRNA_H-paniculata_contig10860.549.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig10860 726..6828 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig10860.549.1 ID=prot_H-paniculata_contig10860.549.1|Name=mRNA_H-paniculata_contig10860.549.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=475bp
MSCPALPSAWLRLVPLLLVAAVSAQNHGDVTCEKPTDPKGVAVHDSGALY
VLDPGQGVIHEFNGTDGQYMRMLTTSIGAAAGGLTVFGDSLYVSPASETD
GTVEVISVGDSGVTMKLPDQGETVARGGYDVAVDANGTVYVSNYLDVGVR
VYNGTTGDYLGDTIEDMNVLGLAFGPDDILYATVPADDSVKRYERSSDGT
NFTLIDAPITGLGGSRNREGVWGIAVNQKNYMIYVVWSGSQEVTGYDSQL
QEMNWWGIGTIKTWWTSDPDSSVSTETSVSNGWTNAGSNSSNLTPWFVTT
DTVGDIYVTASDESANGLDGDVFKYDGETNVVIGRLSNCLGAGANPTDLP
TPSPSIAPTHSHVTAGANRTELPTPSPSITPTLSRVAAGMNWTELPTPSP
TVFGQTAGPTAVGSDASDGTVDVDDDKEDETDDGEDDDDVARTVASGACR
TGGIGMSVEFFLGLAVVSTLVGIF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf