mRNA_H-paniculata_contig20999.5474.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig20999.5474.1 vs. uniprot
Match: D8LS73_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS73_ECTSI) HSP 1 Score: 289 bits (739), Expect = 2.760e-94 Identity = 136/150 (90.67%), Postives = 147/150 (98.00%), Query Frame = 1
Query: 1 YDRVLALLDARAPTKVSAHKLEADPECLLWNPHNPAQILTGSEDGVVCCRDVRSPDTPVYSFTAHERGVSSISFTPLVPGMLATCSEDKTVRVWDVDAEVPLQVASKSMAVGRLFSVQYDASTAFLLATAGSKGHVALWHSDEDEAISAR 450
YDRVLALLDARAPTKV+ H ++ADPECLLWNPHNPAQILTGSEDGVVCCRDVR P++PVYSFTAHE+GVS++SFTPLVPGMLATCSEDKTV+VWDVDAEVPLQVASK+MAVGRLFS+QYDASTAFLLATAGSKGHVALWHSDEDEAISAR
Sbjct: 222 YDRVLALLDARAPTKVTRHTIQADPECLLWNPHNPAQILTGSEDGVVCCRDVRRPESPVYSFTAHEKGVSAVSFTPLVPGMLATCSEDKTVKVWDVDAEVPLQVASKAMAVGRLFSLQYDASTAFLLATAGSKGHVALWHSDEDEAISAR 371
BLAST of mRNA_H-paniculata_contig20999.5474.1 vs. uniprot
Match: A0A6H5JP62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP62_9PHAE) HSP 1 Score: 291 bits (745), Expect = 1.200e-93 Identity = 137/150 (91.33%), Postives = 148/150 (98.67%), Query Frame = 1
Query: 1 YDRVLALLDARAPTKVSAHKLEADPECLLWNPHNPAQILTGSEDGVVCCRDVRSPDTPVYSFTAHERGVSSISFTPLVPGMLATCSEDKTVRVWDVDAEVPLQVASKSMAVGRLFSVQYDASTAFLLATAGSKGHVALWHSDEDEAISAR 450
YDRVLALLDARAPTKV+ HK++ADPECLLWNPHNPAQILTGSEDGVVCCRDVR P++PVYSFTAHE+GVS++SFTPLVPGMLATCSEDKTV+VWDVDAEVPLQVASK+MAVGRLFS+QYDASTAFLLATAGSKGHVALWHSDEDEAISAR
Sbjct: 355 YDRVLALLDARAPTKVTRHKIQADPECLLWNPHNPAQILTGSEDGVVCCRDVRRPESPVYSFTAHEKGVSAVSFTPLVPGMLATCSEDKTVKVWDVDAEVPLQVASKAMAVGRLFSLQYDASTAFLLATAGSKGHVALWHSDEDEAISAR 504
BLAST of mRNA_H-paniculata_contig20999.5474.1 vs. uniprot
Match: A0A835ZB86_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB86_9STRA) HSP 1 Score: 149 bits (376), Expect = 4.340e-40 Identity = 73/145 (50.34%), Postives = 100/145 (68.97%), Query Frame = 1
Query: 31 RAPTKVSAHKLEADPECLLWNPHNPAQILTGSEDGVVCCRDVRSPDTP-VYSFTAHERGVSSISFTPLVPGMLATCSEDKTVRVWDVDAE----VPLQVASKSMAVGRLFSVQYDASTAFLLATAGSKGHVALWHSDEDEAISAR 450
RA + L ADPECL+W+PH+ ++++ G+EDG V C DVR P ++ F AH GV+ +S +P G+LAT SEDKTVR+WD A +P+ +A+K MAVGRLF+V + T FLLAT GSKG VALWH+D++ A++AR
Sbjct: 238 RAAAAAALLPLGADPECLIWDPHDGSRLMAGTEDGAVACWDVRKVGAPPLFRFAAHGEGVAGLSASPHHRGLLATASEDKTVRLWDASAAGGAAMPVLLAAKPMAVGRLFAVSFYPGTPFLLATGGSKGQVALWHTDDEPAVAAR 382
BLAST of mRNA_H-paniculata_contig20999.5474.1 vs. uniprot
Match: A0A7S1C9Q5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C9Q5_9STRA) HSP 1 Score: 142 bits (359), Expect = 9.390e-37 Identity = 65/140 (46.43%), Postives = 91/140 (65.00%), Query Frame = 1
Query: 28 ARAPTKVSAHKLEADPECLLWNPHNPAQILTGSEDGVVCCRDVRSPDTPVYSFTAHERGVSSISFTPLVPGMLATCSEDKTVRVWDVDAEVPLQVASKSMAVGRLFSVQYDASTAFLLATAGSKGHVALWHSDEDEAISA 447
A AP +V + AD E L WN HNP Q+ EDG+V C D+R+P P++S AH VSSI+ PLVPGM+AT S DK+V++WDV E P+ VASK M +G LF+ + + ++LA GSKG +A+W ++E A+ +
Sbjct: 485 ANAPDEVQRVSVSADIESLTWNVHNPVQLFAACEDGMVTCHDLRNPSKPLWSLRAHPAAVSSITVNPLVPGMVATASTDKSVKIWDVAGEAPVCVASKGMPIGELFACAFYGANPWVLAAGGSKGMLAIWETNEAAAVES 624
BLAST of mRNA_H-paniculata_contig20999.5474.1 vs. uniprot
Match: A0A7S2DB83_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DB83_9STRA) HSP 1 Score: 128 bits (321), Expect = 4.710e-32 Identity = 65/147 (44.22%), Postives = 96/147 (65.31%), Query Frame = 1
Query: 19 LLDARAPTKVSAHKLEADPECLLWNPHNPAQILTGSEDGVVCCRDVRSPDTPVYSFTAH-ERGVSSISFTPLVPGMLATCSEDKTVRVWDVDAE--VPLQVASKSMAVGRLFSVQY--DASTAFLLATAGSKGHVALWHSDEDEAIS 444
+LD R+ KV+ + AD E + W+PHNPA ++ +EDG+V C DVR+ P++S AH E S++ F P +PG++AT S DKTV++W E VP V+SK MAVG+LFS+ + +AS + LA GSKG +A+W +DE ++
Sbjct: 331 VLDVRSCEKVTRFAMTADLEDIAWDPHNPALLVAAAEDGMVRCFDVRNTAQPLWSLQAHREEAASTVCFAPHIPGLVATASTDKTVKLWRTTGEGAVPTLVSSKEMAVGKLFSMGWSTEASQPWTLACGGSKGQLAIWEADEQAGLA 477
BLAST of mRNA_H-paniculata_contig20999.5474.1 vs. uniprot
Match: A0A6G0X0N2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X0N2_9STRA) HSP 1 Score: 127 bits (318), Expect = 1.660e-31 Identity = 59/143 (41.26%), Postives = 89/143 (62.24%), Query Frame = 1
Query: 22 LDARAPTKVSAHKLEADPECLLWNPHNPAQILTGSEDGVVCCRDVRSPDTPVYSFTAHERGVSSISFTPLVPGMLATCSEDKTVRVWDVDAEVPLQVASKSMAVGRLFSVQYDASTAFLLATAGSKGHVALWHSDEDEAISAR 450
LD RAP S L AD E + W+PH P+ ++ +EDG+V DVR+ P++ F AH+ VS+ISF+ +PG+ AT S DK V++WD+ P+ VASK M VG L ++Q+ + FLL G+ G +ALW + E++ + +
Sbjct: 316 LDGRAPQAFSKFALSADVESMTWHPHTPSTLVASTEDGIVVGYDVRTNAAPLFRFQAHDTAVSAISFSAAIPGLFATASTDKHVKIWDLQG-TPVCVASKDMQVGELLTMQFYRDSPFLLGVGGTGGVLALWDTSENDTVERK 457
BLAST of mRNA_H-paniculata_contig20999.5474.1 vs. uniprot
Match: A0A6S8F7I0_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8F7I0_9STRA) HSP 1 Score: 124 bits (312), Expect = 1.360e-30 Identity = 63/148 (42.57%), Postives = 91/148 (61.49%), Query Frame = 1
Query: 19 LLDAR--APTKVSAHKLEADPECLLWNPHNPAQILTGSEDGVVCCRDVRSPDT-PVYSFTAHERGVSSISFTPLVPGMLATCSEDKTVRVWDV----DAEVPLQVASKSMAVGRLFSVQYDASTAFLLATAGSKGHVALWHSDEDEAI 441
+ DAR A ++++ + AD EC LWNP + AQ L SEDG V C DVR+ VYSF AH++ S++S +PLV G++ATCS DKTV++WD+ D + P V K+MA+G ++ + FLLA G KG + LW E++ +
Sbjct: 326 VFDARQGASAEIASCAVAADVECALWNPFHGAQFLVSSEDGKVYCFDVRALGKGEVYSFRAHDQACSAVSLSPLVRGLMATCSPDKTVKIWDLNSGKDEDAPSLVCQKTMAIGGIYDCSFSVDDPFLLAAGGDKGILGLWDITEEQNV 473
BLAST of mRNA_H-paniculata_contig20999.5474.1 vs. uniprot
Match: A0A482RLT7_9ARCH (WD40 repeat domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RLT7_9ARCH) HSP 1 Score: 120 bits (302), Expect = 1.520e-30 Identity = 56/122 (45.90%), Postives = 82/122 (67.21%), Query Frame = 1
Query: 13 LALLDAR--APTKVSAHKLEADPECLLWNPHNPAQILTGSEDGVVCCRDVRSPDTPVYSFTAHERGVSSISFTPLVPGMLATCSEDKTVRVWDV---DAEVPLQVASKSMAVGRLFSVQYDA 363
L+ LDAR + ++V + L ADPEC+LWN H+PAQ++ +EDG V DVRSPD P+++ AH S +S + L PGM+ATC DK V+VWD+ P+ +ASK M++G++F+V + A
Sbjct: 99 LSTLDAREGSASRVGRYALPADPECMLWNMHSPAQLIASTEDGSVTAYDVRSPDRPLWTVKAHTGAASGVSLSSLAPGMMATCGIDKCVKVWDIASPSGTAPVCIASKGMSIGQIFTVSFFA 220
BLAST of mRNA_H-paniculata_contig20999.5474.1 vs. uniprot
Match: A0A482S908_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S908_9ARCH) HSP 1 Score: 122 bits (307), Expect = 2.260e-30 Identity = 67/153 (43.79%), Postives = 90/153 (58.82%), Query Frame = 1
Query: 22 LDARAPTKVSAHKLEADPECLLWNPHNPAQILTGSEDGVVCCRDVRS----------PDTPVYSFTAHERGVSSISFTPLVPGMLATCSEDKTVRVWDVDA--EVPLQVASKSMAVGRLFSVQYDASTAFLLATAGSKGHVALWHSDEDEAIS 444
LD R+ + L AD ECL W+P P + T E+G + C D+R+ + V F AHE+ SS+ F+ V GMLAT S DKTV+VWDV E VA KSM+VG+L ++Q+ + F+LATAG KG VA+W SDE+E I+
Sbjct: 212 LDCRSAATATVCGLPADVECLAWDPFLPYHLYTSLENGQIICMDIRNCTNNSTKPSAANNIVCQFQAHEKAASSLQFSKQVQGMLATASVDKTVKVWDVSHLHEDMNPVAYKSMSVGKLLAMQFSPNDPFMLATAGDKGMVAIWESDENETIA 364
BLAST of mRNA_H-paniculata_contig20999.5474.1 vs. uniprot
Match: A0A7S3LXX8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LXX8_9STRA) HSP 1 Score: 124 bits (311), Expect = 2.510e-30 Identity = 69/155 (44.52%), Postives = 89/155 (57.42%), Query Frame = 1
Query: 22 LDARAPTKVSAHKLEADPECLLWNPHNPAQILTGSEDGVVCCRDVRSPDTPV--------------YSFTAHERGVSSISFTPLVPGMLATCSEDKTVRVWDVDAEV-----PLQVASKSMAVGRLFSVQYDASTAFLLATAGSKGHVALWHSDE 429
+DAR T SA L AD E L W+P NP + EDG + C DVR+ ++F AHE+ S ISF+ +PGM+AT S DKTV+VWDV+A+ P +A K+M VG+LF++QY FLLATAG G VA+W SDE
Sbjct: 326 IDARTATTTSACSLTADIESLTWDPFNPFHLYCALEDGAIVCIDVRNCANNAGSTDKLKGKNKAINFTFQAHEQTTSGISFSSRIPGMMATASIDKTVKVWDVNAKSSEGNGPRCIAYKTMNVGKLFALQYSPDDPFLLATAGDTGMVAVWESDE 480 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20999.5474.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig20999.5474.1 >prot_H-paniculata_contig20999.5474.1 ID=prot_H-paniculata_contig20999.5474.1|Name=mRNA_H-paniculata_contig20999.5474.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=151bp YDRVLALLDARAPTKVSAHKLEADPECLLWNPHNPAQILTGSEDGVVCCRback to top mRNA from alignment at H-paniculata_contig20999:593..2151- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig20999.5474.1 ID=mRNA_H-paniculata_contig20999.5474.1|Name=mRNA_H-paniculata_contig20999.5474.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1559bp|location=Sequence derived from alignment at H-paniculata_contig20999:593..2151- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig20999:593..2151- >mRNA_H-paniculata_contig20999.5474.1 ID=mRNA_H-paniculata_contig20999.5474.1|Name=mRNA_H-paniculata_contig20999.5474.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=906bp|location=Sequence derived from alignment at H-paniculata_contig20999:593..2151- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |