prot_H-paniculata_contig20999.5474.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig20999.5474.1
Unique Nameprot_H-paniculata_contig20999.5474.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length151
Homology
BLAST of mRNA_H-paniculata_contig20999.5474.1 vs. uniprot
Match: D8LS73_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS73_ECTSI)

HSP 1 Score: 289 bits (739), Expect = 2.760e-94
Identity = 136/150 (90.67%), Postives = 147/150 (98.00%), Query Frame = 0
Query:    1 YDRVLALLDARAPTKVSAHKLEADPECLLWNPHNPAQILTGSEDGVVCCRDVRSPDTPVYSFTAHERGVSSISFTPLVPGMLATCSEDKTVRVWDVDAEVPLQVASKSMAVGRLFSVQYDASTAFLLATAGSKGHVALWHSDEDEAISAR 150
            YDRVLALLDARAPTKV+ H ++ADPECLLWNPHNPAQILTGSEDGVVCCRDVR P++PVYSFTAHE+GVS++SFTPLVPGMLATCSEDKTV+VWDVDAEVPLQVASK+MAVGRLFS+QYDASTAFLLATAGSKGHVALWHSDEDEAISAR
Sbjct:  222 YDRVLALLDARAPTKVTRHTIQADPECLLWNPHNPAQILTGSEDGVVCCRDVRRPESPVYSFTAHEKGVSAVSFTPLVPGMLATCSEDKTVKVWDVDAEVPLQVASKAMAVGRLFSLQYDASTAFLLATAGSKGHVALWHSDEDEAISAR 371          
BLAST of mRNA_H-paniculata_contig20999.5474.1 vs. uniprot
Match: A0A6H5JP62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP62_9PHAE)

HSP 1 Score: 291 bits (745), Expect = 1.200e-93
Identity = 137/150 (91.33%), Postives = 148/150 (98.67%), Query Frame = 0
Query:    1 YDRVLALLDARAPTKVSAHKLEADPECLLWNPHNPAQILTGSEDGVVCCRDVRSPDTPVYSFTAHERGVSSISFTPLVPGMLATCSEDKTVRVWDVDAEVPLQVASKSMAVGRLFSVQYDASTAFLLATAGSKGHVALWHSDEDEAISAR 150
            YDRVLALLDARAPTKV+ HK++ADPECLLWNPHNPAQILTGSEDGVVCCRDVR P++PVYSFTAHE+GVS++SFTPLVPGMLATCSEDKTV+VWDVDAEVPLQVASK+MAVGRLFS+QYDASTAFLLATAGSKGHVALWHSDEDEAISAR
Sbjct:  355 YDRVLALLDARAPTKVTRHKIQADPECLLWNPHNPAQILTGSEDGVVCCRDVRRPESPVYSFTAHEKGVSAVSFTPLVPGMLATCSEDKTVKVWDVDAEVPLQVASKAMAVGRLFSLQYDASTAFLLATAGSKGHVALWHSDEDEAISAR 504          
BLAST of mRNA_H-paniculata_contig20999.5474.1 vs. uniprot
Match: A0A835ZB86_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB86_9STRA)

HSP 1 Score: 149 bits (376), Expect = 4.340e-40
Identity = 73/145 (50.34%), Postives = 100/145 (68.97%), Query Frame = 0
Query:   11 RAPTKVSAHKLEADPECLLWNPHNPAQILTGSEDGVVCCRDVRSPDTP-VYSFTAHERGVSSISFTPLVPGMLATCSEDKTVRVWDVDAE----VPLQVASKSMAVGRLFSVQYDASTAFLLATAGSKGHVALWHSDEDEAISAR 150
            RA    +   L ADPECL+W+PH+ ++++ G+EDG V C DVR    P ++ F AH  GV+ +S +P   G+LAT SEDKTVR+WD  A     +P+ +A+K MAVGRLF+V +   T FLLAT GSKG VALWH+D++ A++AR
Sbjct:  238 RAAAAAALLPLGADPECLIWDPHDGSRLMAGTEDGAVACWDVRKVGAPPLFRFAAHGEGVAGLSASPHHRGLLATASEDKTVRLWDASAAGGAAMPVLLAAKPMAVGRLFAVSFYPGTPFLLATGGSKGQVALWHTDDEPAVAAR 382          
BLAST of mRNA_H-paniculata_contig20999.5474.1 vs. uniprot
Match: A0A7S1C9Q5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C9Q5_9STRA)

HSP 1 Score: 142 bits (359), Expect = 9.390e-37
Identity = 65/140 (46.43%), Postives = 91/140 (65.00%), Query Frame = 0
Query:   10 ARAPTKVSAHKLEADPECLLWNPHNPAQILTGSEDGVVCCRDVRSPDTPVYSFTAHERGVSSISFTPLVPGMLATCSEDKTVRVWDVDAEVPLQVASKSMAVGRLFSVQYDASTAFLLATAGSKGHVALWHSDEDEAISA 149
            A AP +V    + AD E L WN HNP Q+    EDG+V C D+R+P  P++S  AH   VSSI+  PLVPGM+AT S DK+V++WDV  E P+ VASK M +G LF+  +  +  ++LA  GSKG +A+W ++E  A+ +
Sbjct:  485 ANAPDEVQRVSVSADIESLTWNVHNPVQLFAACEDGMVTCHDLRNPSKPLWSLRAHPAAVSSITVNPLVPGMVATASTDKSVKIWDVAGEAPVCVASKGMPIGELFACAFYGANPWVLAAGGSKGMLAIWETNEAAAVES 624          
BLAST of mRNA_H-paniculata_contig20999.5474.1 vs. uniprot
Match: A0A7S2DB83_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DB83_9STRA)

HSP 1 Score: 128 bits (321), Expect = 4.710e-32
Identity = 65/147 (44.22%), Postives = 96/147 (65.31%), Query Frame = 0
Query:    7 LLDARAPTKVSAHKLEADPECLLWNPHNPAQILTGSEDGVVCCRDVRSPDTPVYSFTAH-ERGVSSISFTPLVPGMLATCSEDKTVRVWDVDAE--VPLQVASKSMAVGRLFSVQY--DASTAFLLATAGSKGHVALWHSDEDEAIS 148
            +LD R+  KV+   + AD E + W+PHNPA ++  +EDG+V C DVR+   P++S  AH E   S++ F P +PG++AT S DKTV++W    E  VP  V+SK MAVG+LFS+ +  +AS  + LA  GSKG +A+W +DE   ++
Sbjct:  331 VLDVRSCEKVTRFAMTADLEDIAWDPHNPALLVAAAEDGMVRCFDVRNTAQPLWSLQAHREEAASTVCFAPHIPGLVATASTDKTVKLWRTTGEGAVPTLVSSKEMAVGKLFSMGWSTEASQPWTLACGGSKGQLAIWEADEQAGLA 477          
BLAST of mRNA_H-paniculata_contig20999.5474.1 vs. uniprot
Match: A0A6G0X0N2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X0N2_9STRA)

HSP 1 Score: 127 bits (318), Expect = 1.660e-31
Identity = 59/143 (41.26%), Postives = 89/143 (62.24%), Query Frame = 0
Query:    8 LDARAPTKVSAHKLEADPECLLWNPHNPAQILTGSEDGVVCCRDVRSPDTPVYSFTAHERGVSSISFTPLVPGMLATCSEDKTVRVWDVDAEVPLQVASKSMAVGRLFSVQYDASTAFLLATAGSKGHVALWHSDEDEAISAR 150
            LD RAP   S   L AD E + W+PH P+ ++  +EDG+V   DVR+   P++ F AH+  VS+ISF+  +PG+ AT S DK V++WD+    P+ VASK M VG L ++Q+   + FLL   G+ G +ALW + E++ +  +
Sbjct:  316 LDGRAPQAFSKFALSADVESMTWHPHTPSTLVASTEDGIVVGYDVRTNAAPLFRFQAHDTAVSAISFSAAIPGLFATASTDKHVKIWDLQG-TPVCVASKDMQVGELLTMQFYRDSPFLLGVGGTGGVLALWDTSENDTVERK 457          
BLAST of mRNA_H-paniculata_contig20999.5474.1 vs. uniprot
Match: A0A6S8F7I0_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8F7I0_9STRA)

HSP 1 Score: 124 bits (312), Expect = 1.360e-30
Identity = 63/148 (42.57%), Postives = 91/148 (61.49%), Query Frame = 0
Query:    7 LLDAR--APTKVSAHKLEADPECLLWNPHNPAQILTGSEDGVVCCRDVRSPDT-PVYSFTAHERGVSSISFTPLVPGMLATCSEDKTVRVWDV----DAEVPLQVASKSMAVGRLFSVQYDASTAFLLATAGSKGHVALWHSDEDEAI 147
            + DAR  A  ++++  + AD EC LWNP + AQ L  SEDG V C DVR+     VYSF AH++  S++S +PLV G++ATCS DKTV++WD+    D + P  V  K+MA+G ++   +     FLLA  G KG + LW   E++ +
Sbjct:  326 VFDARQGASAEIASCAVAADVECALWNPFHGAQFLVSSEDGKVYCFDVRALGKGEVYSFRAHDQACSAVSLSPLVRGLMATCSPDKTVKIWDLNSGKDEDAPSLVCQKTMAIGGIYDCSFSVDDPFLLAAGGDKGILGLWDITEEQNV 473          
BLAST of mRNA_H-paniculata_contig20999.5474.1 vs. uniprot
Match: A0A482RLT7_9ARCH (WD40 repeat domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RLT7_9ARCH)

HSP 1 Score: 120 bits (302), Expect = 1.520e-30
Identity = 56/122 (45.90%), Postives = 82/122 (67.21%), Query Frame = 0
Query:    5 LALLDAR--APTKVSAHKLEADPECLLWNPHNPAQILTGSEDGVVCCRDVRSPDTPVYSFTAHERGVSSISFTPLVPGMLATCSEDKTVRVWDV---DAEVPLQVASKSMAVGRLFSVQYDA 121
            L+ LDAR  + ++V  + L ADPEC+LWN H+PAQ++  +EDG V   DVRSPD P+++  AH    S +S + L PGM+ATC  DK V+VWD+       P+ +ASK M++G++F+V + A
Sbjct:   99 LSTLDAREGSASRVGRYALPADPECMLWNMHSPAQLIASTEDGSVTAYDVRSPDRPLWTVKAHTGAASGVSLSSLAPGMMATCGIDKCVKVWDIASPSGTAPVCIASKGMSIGQIFTVSFFA 220          
BLAST of mRNA_H-paniculata_contig20999.5474.1 vs. uniprot
Match: A0A482S908_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S908_9ARCH)

HSP 1 Score: 122 bits (307), Expect = 2.260e-30
Identity = 67/153 (43.79%), Postives = 90/153 (58.82%), Query Frame = 0
Query:    8 LDARAPTKVSAHKLEADPECLLWNPHNPAQILTGSEDGVVCCRDVRS----------PDTPVYSFTAHERGVSSISFTPLVPGMLATCSEDKTVRVWDVDA--EVPLQVASKSMAVGRLFSVQYDASTAFLLATAGSKGHVALWHSDEDEAIS 148
            LD R+    +   L AD ECL W+P  P  + T  E+G + C D+R+           +  V  F AHE+  SS+ F+  V GMLAT S DKTV+VWDV    E    VA KSM+VG+L ++Q+  +  F+LATAG KG VA+W SDE+E I+
Sbjct:  212 LDCRSAATATVCGLPADVECLAWDPFLPYHLYTSLENGQIICMDIRNCTNNSTKPSAANNIVCQFQAHEKAASSLQFSKQVQGMLATASVDKTVKVWDVSHLHEDMNPVAYKSMSVGKLLAMQFSPNDPFMLATAGDKGMVAIWESDENETIA 364          
BLAST of mRNA_H-paniculata_contig20999.5474.1 vs. uniprot
Match: A0A7S3LXX8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LXX8_9STRA)

HSP 1 Score: 124 bits (311), Expect = 2.510e-30
Identity = 69/155 (44.52%), Postives = 89/155 (57.42%), Query Frame = 0
Query:    8 LDARAPTKVSAHKLEADPECLLWNPHNPAQILTGSEDGVVCCRDVRSPDTPV--------------YSFTAHERGVSSISFTPLVPGMLATCSEDKTVRVWDVDAEV-----PLQVASKSMAVGRLFSVQYDASTAFLLATAGSKGHVALWHSDE 143
            +DAR  T  SA  L AD E L W+P NP  +    EDG + C DVR+                   ++F AHE+  S ISF+  +PGM+AT S DKTV+VWDV+A+      P  +A K+M VG+LF++QY     FLLATAG  G VA+W SDE
Sbjct:  326 IDARTATTTSACSLTADIESLTWDPFNPFHLYCALEDGAIVCIDVRNCANNAGSTDKLKGKNKAINFTFQAHEQTTSGISFSSRIPGMMATASIDKTVKVWDVNAKSSEGNGPRCIAYKTMNVGKLFALQYSPDDPFLLATAGDTGMVAVWESDE 480          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20999.5474.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS73_ECTSI2.760e-9490.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JP62_9PHAE1.200e-9391.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZB86_9STRA4.340e-4050.34WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A7S1C9Q5_9STRA9.390e-3746.43Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S2DB83_9STRA4.710e-3244.22Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6G0X0N2_9STRA1.660e-3141.26Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A6S8F7I0_9STRA1.360e-3042.57Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A482RLT7_9ARCH1.520e-3045.90WD40 repeat domain-containing protein n=1 Tax=arch... [more]
A0A482S908_9ARCH2.260e-3043.79Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S3LXX8_9STRA2.510e-3044.52Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 14..51
e-value: 1.3
score: 16.3
coord: 55..95
e-value: 1.9E-9
score: 47.4
coord: 100..140
e-value: 120.0
score: 3.8
IPR001680WD40 repeatPFAMPF00400WD40coord: 58..95
e-value: 2.6E-5
score: 24.9
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 62..104
score: 13.783
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..148
e-value: 2.6E-28
score: 101.2
NoneNo IPR availablePANTHERPTHR14091:SF0PERIODIC TRYPTOPHAN PROTEIN 1 HOMOLOGcoord: 1..149
NoneNo IPR availablePANTHERPTHR14091WD REPEAT PROTEINcoord: 1..149
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 82..96
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 62..149
score: 14.793
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 2..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20999contigH-paniculata_contig20999:593..2151 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20999.5474.1mRNA_H-paniculata_contig20999.5474.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig20999 593..2151 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig20999.5474.1 ID=prot_H-paniculata_contig20999.5474.1|Name=mRNA_H-paniculata_contig20999.5474.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=151bp
YDRVLALLDARAPTKVSAHKLEADPECLLWNPHNPAQILTGSEDGVVCCR
DVRSPDTPVYSFTAHERGVSSISFTPLVPGMLATCSEDKTVRVWDVDAEV
PLQVASKSMAVGRLFSVQYDASTAFLLATAGSKGHVALWHSDEDEAISAR
*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf