prot_H-paniculata_contig2087.5434.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2087.5434.1
Unique Nameprot_H-paniculata_contig2087.5434.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length167
Homology
BLAST of mRNA_H-paniculata_contig2087.5434.1 vs. uniprot
Match: A0A6H5KZB1_9PHAE (RNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZB1_9PHAE)

HSP 1 Score: 226 bits (576), Expect = 7.970e-66
Identity = 117/133 (87.97%), Postives = 125/133 (93.98%), Query Frame = 0
Query:   19 GPGRFADKSFYIGYGTTEEASFVEAAMQPRSVEKSRDGFAAGRLEEAILDVNPDEAVDMAKKQRLLHWDSRKKKYVKTTLAELGE-KGGGSRKIRTESGVVVSSKKAAHGEIYAKWKRSSNRKVGREGDEEEA 150
            GPGRFADK+FYIGYGTTE +SFVEAA+QPRSVEKS DGFAAGRLEEAILDVNPDEAVDMAKKQRLLHWDSRKKK+VKTTLAELGE K GGSRKIRTESGVVV +K A  GEIYAKWKR+SNR+VGREGDEEE+
Sbjct:  765 GPGRFADKAFYIGYGTTEASSFVEAALQPRSVEKSGDGFAAGRLEEAILDVNPDEAVDMAKKQRLLHWDSRKKKFVKTTLAELGERKTGGSRKIRTESGVVVKAKNAPQGEIYAKWKRASNRQVGREGDEEES 897          
BLAST of mRNA_H-paniculata_contig2087.5434.1 vs. uniprot
Match: A0A835Z3G9_9STRA (RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3G9_9STRA)

HSP 1 Score: 161 bits (408), Expect = 6.620e-43
Identity = 80/127 (62.99%), Postives = 101/127 (79.53%), Query Frame = 0
Query:   22 RFADKSFYIGYGTTEEASFVEAAMQPRSVEKSRDGFAAGRLEEAILDVNPDEAVDMAKKQRLLHWDSRKKKYVKTTLAELGEKGGGSRKIRTESGVVVSSKKAAHGEIYAKWKRSSNRKVGREGDEE 148
            RFAD   +IGYG TE  +FVE AMQPRSVEK+ DGFA  RL EA+LDVNPDEAVDM +KQR+LHWD+RK K+VKT+LAE+ +     R +R E+GV+V++KK   GEI++KW++ S R+VGREGDEE
Sbjct:  706 RFADPEHFIGYGVTEAGAFVEGAMQPRSVEKAGDGFATDRLAEAMLDVNPDEAVDMVRKQRVLHWDARKHKFVKTSLAEMSDNK--KRTVRNEAGVMVTAKKQKAGEIFSKWQKKSRREVGREGDEE 830          
BLAST of mRNA_H-paniculata_contig2087.5434.1 vs. uniprot
Match: W7TM98_9STRA (RNA helicase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TM98_9STRA)

HSP 1 Score: 137 bits (346), Expect = 1.540e-34
Identity = 68/132 (51.52%), Postives = 93/132 (70.45%), Query Frame = 0
Query:   23 FADKSFYIGYGTTEEASFVEAAMQPRSVEKSRDGFAAGRLEEAILDVNPDEAVDMAKKQRLLHWDSRKKKYVKTTLAELGEKGGGSRKIRTESGVVVSSKKAAHGEIYAKWKRSSNRKVGREGDEEEASLKG 154
            + D + +I YG TE    VE  +QPRSVEK  +   A RLEEA+LDV PDEA++M K++R++HWD+RKKKYV+ T++ELGE G G +K+RTESGV VS    A GEIY KW++ +N+ V   G +E+   +G
Sbjct:  758 YKDPNHFIEYGVTEHDQMVEDRLQPRSVEKGSEALLANRLEEALLDVQPDEALEMVKRKRIMHWDARKKKYVRATMSELGE-GRGQKKLRTESGVTVSGSSQATGEIYKKWQKRTNKTVSLAGGDEDDGNEG 888          
BLAST of mRNA_H-paniculata_contig2087.5434.1 vs. uniprot
Match: A0A7S4DFA2_HETAK (RNA helicase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DFA2_HETAK)

HSP 1 Score: 120 bits (300), Expect = 4.760e-31
Identity = 63/136 (46.32%), Postives = 92/136 (67.65%), Query Frame = 0
Query:   23 FADKSFYIGYG----TTEEASFVEAAMQPRSVEKSRDGFAAGRLEEAILDVNPDEAVDMAKKQRLLHWDSRKKKYVKTTLAELGEKGGGSRKIRTESGVVVSSKKAAHGEIYAKWKRSSNRKVGREGDEEEASLKG 154
            F D+  +IGYG     +E  +FVE A+QP+S  K  +      LE+++LD+NPD A +M KK++ +HWD+RKKKY+KTT+ EL ++ G S K+RTESG +V+ K    GE+Y KWK  ++++V  EG EEEA+  G
Sbjct:   59 FRDEENFIGYGGKAERSERENFVEGALQPKSDTKESEKGIMSLLEDSLLDINPDTAQEMHKKKQFMHWDARKKKYIKTTVQELAKQRGNS-KLRTESGAIVNKKVVPTGELYQKWKSKTHKEVAGEGIEEEAADTG 193          
BLAST of mRNA_H-paniculata_contig2087.5434.1 vs. uniprot
Match: A0A484EF95_BRELC (RNA helicase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EF95_BRELC)

HSP 1 Score: 99.0 bits (245), Expect = 4.950e-22
Identity = 60/127 (47.24%), Postives = 79/127 (62.20%), Query Frame = 0
Query:   23 FADKSFYIGYGTTEEASFVEAAMQPRSVEKSRDGFAAGRLEEAILDVNPDEAVDMAKKQRLLHWDSRKKKYVKTTLAELGEKGGGSRKIRTESGVVVSSKKAAHGEIYAKWKRSSNRKVGREGDEEE 149
            F D   YIGY    E++ +E  +   +     + FA  RLEEAILDVNPDEA++M KK+R+LHWD RKKK+VKTT  EL  +G  + K R ESGV    KK   GE+Y KW++  +++V   G E E
Sbjct:   76 FKDDDNYIGYMKDGEST-IEGFLATNADGGKVNAFAEARLEEAILDVNPDEAIEMNKKRRILHWDVRKKKFVKTTAGELTSQG--TLKRRNESGVNF-RKKQQFGEVYRKWQQKQHKRVAGGGMEVE 198          
BLAST of mRNA_H-paniculata_contig2087.5434.1 vs. uniprot
Match: A0A5D6Y2F7_9STRA (RNA helicase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y2F7_9STRA)

HSP 1 Score: 101 bits (252), Expect = 6.520e-22
Identity = 61/133 (45.86%), Postives = 81/133 (60.90%), Query Frame = 0
Query:   23 FADKSFYIGYGTTEEASFVEAAMQPRSVEKSR-DGFAAGRLEEAILDVNPDEAVDMAKKQRLLHWDSRKKKYVKTTLAELGEKGGGSRKIRTESGVVVSSKKAAHGEIYAKWKRSSNRKVGREGDEEEASLKG 154
            F D+  YIGY   ++          R  E  + + F   RLEEAILDVNPDEA+++ KK+R+LHWD RKKK+VKTT  EL  +G  + K R ESGV V  KK   G IY KW++  N++V   G+E+E +  G
Sbjct:  695 FVDREHYIGY--LKDGEHATEEFLARGAEGGKVNSFQEARLEEAILDVNPDEAIELNKKRRILHWDVRKKKFVKTTAGELTAQG--TLKRRNESGVSVRKKKEV-GAIYKKWQQRQNKRVFTGGEEDEDAAGG 822          
BLAST of mRNA_H-paniculata_contig2087.5434.1 vs. uniprot
Match: D0N6Y7_PHYIT (RNA helicase n=6 Tax=Phytophthora TaxID=4783 RepID=D0N6Y7_PHYIT)

HSP 1 Score: 99.8 bits (247), Expect = 3.030e-21
Identity = 60/132 (45.45%), Postives = 81/132 (61.36%), Query Frame = 0
Query:   19 GPGRFADKSFYIGYGTTEEASFVEAAMQPRSVEKSR-DGFAAGRLEEAILDVNPDEAVDMAKKQRLLHWDSRKKKYVKTTLAELGEKGGGSRKIRTESGVVVSSKKAAHGEIYAKWKRSSNRKVGREGDEEE 149
            G   F D   YIGY   ++  +       ++ +  + + FA  RLEEAILDVNPDEA++M KK+R+LHWD RKKK+VKTT  EL  +G  + K R ESGV V  KK   GE+Y KW++  +++V   G E E
Sbjct:  631 GDASFKDDENYIGY--MKDGDYTTEGFLAKNADGGKVNAFAEARLEEAILDVNPDEAIEMNKKRRILHWDVRKKKFVKTTAGELTSQG--TLKRRNESGVSV-RKKQQVGEVYRKWQQKQHKRVAGGGVEVE 757          
BLAST of mRNA_H-paniculata_contig2087.5434.1 vs. uniprot
Match: A0A7S0STQ5_9STRA (RNA helicase n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0STQ5_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 4.840e-21
Identity = 50/127 (39.37%), Postives = 86/127 (67.72%), Query Frame = 0
Query:   23 FADKSFYIGYGTTEE-ASFVEAAMQPRSVEKSRDGFAAGRLEEAILDVN-----PDEAVDMAKKQRLLHWDSRKKKYVKTTLAELGEKGG-GSRKIRTESGVVVSSKKAAHGEIYAKWKRSSNRKVG 142
            F D  +Y+ YGT +E A++ E ++QP+S  KS +  +A  LE A+LD+       D  ++  KK+++ HWD +K+K+VK T+ E+ + G  G++++R+ESG++VSS K   GE+Y KWK+ ++R++G
Sbjct:  106 FRDNKYYMTYGTEDERANYAEESLQPKSNLKSSEAQSAAMLESALLDLTGNTYLQDNTLENNKKKKITHWDEKKRKFVKQTIEEMAQSGRKGTKRLRSESGILVSSNKKK-GEMYEKWKKKNHREIG 231          
BLAST of mRNA_H-paniculata_contig2087.5434.1 vs. uniprot
Match: A0A662XA09_9STRA (RNA helicase (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XA09_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 6.080e-21
Identity = 56/120 (46.67%), Postives = 78/120 (65.00%), Query Frame = 0
Query:   23 FADKSFYIGYGTTEEASFVEAAMQPRSVEKSR-DGFAAGRLEEAILDVNPDEAVDMAKKQRLLHWDSRKKKYVKTTLAELGEKGGGSRKIRTESGVVVSSKKAAHGEIYAKWKRSSNRKV 141
            F D+  YIGY   ++  +       ++ +  + + FA  RLEEAILDVNPDEA++M KK+R+LHWD RKKK+VKTT  EL  +G  + K R ESGV V  KK   GE+Y KW++  +++V
Sbjct:  310 FKDRENYIGY--MKDGDYTTEGFLAKNADGGKVNAFAEARLEEAILDVNPDEAIEMNKKRRILHWDVRKKKFVKTTAGELTSQG--TLKRRNESGVSV-RKKQQVGEVYRKWQQKQHKRV 424          
BLAST of mRNA_H-paniculata_contig2087.5434.1 vs. uniprot
Match: H3GSH8_PHYRM (RNA helicase n=20 Tax=Peronosporaceae TaxID=4777 RepID=H3GSH8_PHYRM)

HSP 1 Score: 98.2 bits (243), Expect = 1.040e-20
Identity = 59/128 (46.09%), Postives = 80/128 (62.50%), Query Frame = 0
Query:   23 FADKSFYIGYGTTEEASFVEAAMQPRSVEKSR-DGFAAGRLEEAILDVNPDEAVDMAKKQRLLHWDSRKKKYVKTTLAELGEKGGGSRKIRTESGVVVSSKKAAHGEIYAKWKRSSNRKVGREGDEEE 149
            F D   YIGY   ++  +       ++ +  + + FA  RLEEAILDVNPDEA++M KK+R+LHWD RKKK+VKTT  EL  +G  + K R ESGV V  KK   GE+Y KW++  +++V   G E E
Sbjct:  620 FKDDDNYIGY--MKDGDYTTEGFLSKNADGGKVNAFAEARLEEAILDVNPDEAIEMNKKRRILHWDVRKKKFVKTTAGELTSQG--TLKRRNESGVNV-RKKQQVGEVYRKWQQKQHKRVAGGGVEIE 742          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2087.5434.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZB1_9PHAE7.970e-6687.97RNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
A0A835Z3G9_9STRA6.620e-4362.99RNA helicase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
W7TM98_9STRA1.540e-3451.52RNA helicase n=2 Tax=Monodopsidaceae TaxID=425072 ... [more]
A0A7S4DFA2_HETAK4.760e-3146.32RNA helicase (Fragment) n=1 Tax=Heterosigma akashi... [more]
A0A484EF95_BRELC4.950e-2247.24RNA helicase n=1 Tax=Bremia lactucae TaxID=4779 Re... [more]
A0A5D6Y2F7_9STRA6.520e-2245.86RNA helicase n=1 Tax=Pythium brassicum TaxID=14850... [more]
D0N6Y7_PHYIT3.030e-2145.45RNA helicase n=6 Tax=Phytophthora TaxID=4783 RepID... [more]
A0A7S0STQ5_9STRA4.840e-2139.37RNA helicase n=1 Tax=Chromulina nebulosa TaxID=967... [more]
A0A662XA09_9STRA6.080e-2146.67RNA helicase (Fragment) n=2 Tax=Nothophytophthora ... [more]
H3GSH8_PHYRM1.040e-2046.09RNA helicase n=20 Tax=Peronosporaceae TaxID=4777 R... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012541DBP10, C-terminalSMARTSM01123DBP10CT_2coord: 68..137
e-value: 7.3E-12
score: 55.4
IPR012541DBP10, C-terminalPFAMPF08147DBP10CTcoord: 68..135
e-value: 3.0E-14
score: 53.0
NoneNo IPR availablePRODOMPD024971coord: 25..151
e-value: 3.0E-10
score: 154.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2087contigH-paniculata_contig2087:8018..10499 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2087.5434.1mRNA_H-paniculata_contig2087.5434.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2087 8017..10499 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2087.5434.1 ID=prot_H-paniculata_contig2087.5434.1|Name=mRNA_H-paniculata_contig2087.5434.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=167bp
ELIGDEGGGTGPLIGNGNGPGRFADKSFYIGYGTTEEASFVEAAMQPRSV
EKSRDGFAAGRLEEAILDVNPDEAVDMAKKQRLLHWDSRKKKYVKTTLAE
LGEKGGGSRKIRTESGVVVSSKKAAHGEIYAKWKRSSNRKVGREGDEEEA
SLKGTVSGGGGGWGSGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012541DBP10_C