prot_H-paniculata_contig20792.5405.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig20792.5405.1
Unique Nameprot_H-paniculata_contig20792.5405.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length117
Homology
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BLAST of mRNA_H-paniculata_contig20792.5405.1 vs. uniprot
Match: A0A0K6G0M4_9AGAM (LOC100283929 n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A0K6G0M4_9AGAM)

HSP 1 Score: 78.2 bits (191), Expect = 1.800e-15
Identity = 40/94 (42.55%), Postives = 56/94 (59.57%), Query Frame = 0 
Query:   14 LHVHESSSETGSMGAMVYRVKNGDGEEVDVFLGWETSHSGSNHVYVECRKKDHWWHVGSKDCMKNLTQQSGTTSSDLGRNGINVVGSIGQSWSP 107
            LHVH S +  GS  A +YR       + D+F+GWET  +G+  VY + ++KD+WW V SKD M +    + +TS DL R G+ V+  IG S SP
Sbjct:  106 LHVHTSGAAVGSKAATIYR----SAADTDMFVGWETPWNGTPSVYADSQQKDYWWDVSSKDSMGDKLDDASSTS-DLTREGLEVMMDIGDSTSP 194
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20792.5405.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A0K6G0M4_9AGAM1.800e-1542.55LOC100283929 n=1 Tax=Rhizoctonia solani TaxID=4569... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36482FAMILY NOT NAMEDcoord: 11..108
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..116
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20792contigH-paniculata_contig20792:198..548 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20792.5405.1mRNA_H-paniculata_contig20792.5405.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig20792 98..548 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig20792.5405.1 ID=prot_H-paniculata_contig20792.5405.1|Name=mRNA_H-paniculata_contig20792.5405.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=117bp
MRPALGAASGVCALHVHESSSETGSMGAMVYRVKNGDGEEVDVFLGWETS
HSGSNHVYVECRKKDHWWHVGSKDCMKNLTQQSGTTSSDLGRNGINVVGS
IGQSWSPLLTFFIGLA*
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