mRNA_H-paniculata_contig2077.5399.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2077.5399.1 vs. uniprot
Match: A0A6H5JC10_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC10_9PHAE) HSP 1 Score: 169 bits (429), Expect = 6.250e-43 Identity = 120/371 (32.35%), Postives = 188/371 (50.67%), Query Frame = 1
Query: 1 QEMQGLIDNGVWTQVE-CPNNKLVVSTMMLYKKKIGEDGSVEKYKCRLVTHGNRQIKGV-HPGSFVPCTRSDQQNMILSLAAIQDWELRH---------------IFVKVPVEYREFPGAVGRLDKAINGLMQAGRCWTMKITADLTVNSFEQSHADPCVFRKIVDEEVVAVIIVCVDDLLISTKGPKILDELLADLRLDHKFKHLEDAKRYLGCHIIRDRKKMKIKIDQHLYARSIAERFGIAKTRMLPATAGSNTMIKNDEPKTSEEAEEMRAFPYREAVEMLVWAATMMPSDITHSVRTTASFCENPGVAHKRAVVKIL*----TADLRITYGGQDYGVEMMAYADSNYATRQNSRHSVSGTAVLLEG 1050
+E +G + G ++ V+ P + VS+ + K ++G ++ +K RLV G QI V + S PC S ++L++A + L H +F+K+P + + + ++AI GL Q+GR W L N FEQ ADPCVFRK+VDE VV +I++ VDD+L++ +ELLA L K+LE+ + + GC I RD + ++I Q Y S+ +RF + T +PA+ G + K D+ K E +P REA+ ++W +T D++ +VR A P H A+ KIL T DL ITY + G+ + Y D++YA ++ R SVSG A + G
Sbjct: 312 EEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHEIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDED-CEELLASLSKKFPTKNLEECQWFDGCAIERDVETGTLRISQTAYIDSMVKRFDVQSTSRIPASPGVDLGPKRDDEKGGE-------WPVREAIGSIMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASYADTED-RRSVSGLATTVGG 672
BLAST of mRNA_H-paniculata_contig2077.5399.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE) HSP 1 Score: 169 bits (428), Expect = 1.740e-42 Identity = 120/371 (32.35%), Postives = 188/371 (50.67%), Query Frame = 1
Query: 1 QEMQGLIDNGVWTQVE-CPNNKLVVSTMMLYKKKIGEDGSVEKYKCRLVTHGNRQIKGV-HPGSFVPCTRSDQQNMILSLAAIQDWELRH---------------IFVKVPVEYREFPGAVGRLDKAINGLMQAGRCWTMKITADLTVNSFEQSHADPCVFRKIVDEEVVAVIIVCVDDLLISTKGPKILDELLADLRLDHKFKHLEDAKRYLGCHIIRDRKKMKIKIDQHLYARSIAERFGIAKTRMLPATAGSNTMIKNDEPKTSEEAEEMRAFPYREAVEMLVWAATMMPSDITHSVRTTASFCENPGVAHKRAVVKIL*----TADLRITYGGQDYGVEMMAYADSNYATRQNSRHSVSGTAVLLEG 1050
+E +G + G ++ V+ P + VS+ + K ++G ++ +K RLV G QI V + S PC S ++L++A + L H +F+K+P + + + ++AI GL Q+GR W L N FEQ ADPCVFRK+VDE VV +I++ VDD+L++ +ELLA L K+L + + + GC I RD + ++I Q Y S+ ERF + T +PAT G++ K ++ EE +P REA+ ++W +T D++ +VR A P H A+ KIL T DL ITY + G+ + Y D++YA ++ R SVSG A + G
Sbjct: 758 EEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDED-CEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASYADTED-RRSVSGLATTVGG 1118
BLAST of mRNA_H-paniculata_contig2077.5399.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 169 bits (428), Expect = 1.870e-42 Identity = 120/371 (32.35%), Postives = 188/371 (50.67%), Query Frame = 1
Query: 1 QEMQGLIDNGVWTQVE-CPNNKLVVSTMMLYKKKIGEDGSVEKYKCRLVTHGNRQIKGV-HPGSFVPCTRSDQQNMILSLAAIQDWELRH---------------IFVKVPVEYREFPGAVGRLDKAINGLMQAGRCWTMKITADLTVNSFEQSHADPCVFRKIVDEEVVAVIIVCVDDLLISTKGPKILDELLADLRLDHKFKHLEDAKRYLGCHIIRDRKKMKIKIDQHLYARSIAERFGIAKTRMLPATAGSNTMIKNDEPKTSEEAEEMRAFPYREAVEMLVWAATMMPSDITHSVRTTASFCENPGVAHKRAVVKIL*----TADLRITYGGQDYGVEMMAYADSNYATRQNSRHSVSGTAVLLEG 1050
+E +G + G ++ V+ P + VS+ + K ++G ++ +K RLV G QI V + S PC S ++L++A + L H +F+K+P + + + ++AI GL Q+GR W L N FEQ ADPCVFRK+VDE VV +I++ VDD+L++ +ELLA L K+L + + + GC I RD + ++I Q Y S+ ERF + T +PAT G++ K ++ EE +P REA+ ++W +T D++ +VR A P H A+ KIL T DL ITY + G+ + Y D++YA ++ R SVSG A + G
Sbjct: 1137 EEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDED-CEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASYADTED-RRSVSGLATTVGG 1497
BLAST of mRNA_H-paniculata_contig2077.5399.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE) HSP 1 Score: 169 bits (428), Expect = 1.910e-42 Identity = 120/371 (32.35%), Postives = 188/371 (50.67%), Query Frame = 1
Query: 1 QEMQGLIDNGVWTQVE-CPNNKLVVSTMMLYKKKIGEDGSVEKYKCRLVTHGNRQIKGV-HPGSFVPCTRSDQQNMILSLAAIQDWELRH---------------IFVKVPVEYREFPGAVGRLDKAINGLMQAGRCWTMKITADLTVNSFEQSHADPCVFRKIVDEEVVAVIIVCVDDLLISTKGPKILDELLADLRLDHKFKHLEDAKRYLGCHIIRDRKKMKIKIDQHLYARSIAERFGIAKTRMLPATAGSNTMIKNDEPKTSEEAEEMRAFPYREAVEMLVWAATMMPSDITHSVRTTASFCENPGVAHKRAVVKIL*----TADLRITYGGQDYGVEMMAYADSNYATRQNSRHSVSGTAVLLEG 1050
+E +G + G ++ V+ P + VS+ + K ++G ++ +K RLV G QI V + S PC S ++L++A + L H +F+K+P + + + ++AI GL Q+GR W L N FEQ ADPCVFRK+VDE VV +I++ VDD+L++ +ELLA L K+L + + + GC I RD + ++I Q Y S+ ERF + T +PAT G++ K ++ EE +P REA+ ++W +T D++ +VR A P H A+ KIL T DL ITY + G+ + Y D++YA ++ R SVSG A + G
Sbjct: 1300 EEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDED-CEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASYADTED-RRSVSGLATTVGG 1660
BLAST of mRNA_H-paniculata_contig2077.5399.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE) HSP 1 Score: 168 bits (425), Expect = 4.710e-42 Identity = 119/371 (32.08%), Postives = 188/371 (50.67%), Query Frame = 1
Query: 1 QEMQGLIDNGVWTQVE-CPNNKLVVSTMMLYKKKIGEDGSVEKYKCRLVTHGNRQIKGV-HPGSFVPCTRSDQQNMILSLAAIQDWELRH---------------IFVKVPVEYREFPGAVGRLDKAINGLMQAGRCWTMKITADLTVNSFEQSHADPCVFRKIVDEEVVAVIIVCVDDLLISTKGPKILDELLADLRLDHKFKHLEDAKRYLGCHIIRDRKKMKIKIDQHLYARSIAERFGIAKTRMLPATAGSNTMIKNDEPKTSEEAEEMRAFPYREAVEMLVWAATMMPSDITHSVRTTASFCENPGVAHKRAVVKIL*----TADLRITYGGQDYGVEMMAYADSNYATRQNSRHSVSGTAVLLEG 1050
+E +G + G ++ V+ P + VS+ + K ++G ++ +K RLV G QI V + S PC S ++L++A + L H +F+K+P + + + ++AI GL Q+GR W L N FEQ ADPCVFRK+VD+ VV +I++ VDD+L++ +ELLA L K+L + + + GC I RD + ++I Q Y S+ ERF + T +PAT G++ K ++ EE +P REA+ ++W +T D++ +VR A P H A+ KIL T DL ITY + G+ + Y D++YA ++ R SVSG A + G
Sbjct: 1157 EEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDED-CEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASYADTED-RRSVSGLATTVGG 1517
BLAST of mRNA_H-paniculata_contig2077.5399.1 vs. uniprot
Match: A0A6H5JQW4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQW4_9PHAE) HSP 1 Score: 159 bits (403), Expect = 3.450e-39 Identity = 116/371 (31.27%), Postives = 186/371 (50.13%), Query Frame = 1
Query: 1 QEMQGLIDNGVWTQVE-CPNNKLVVSTMMLYKKKIGEDGSVEKYKCRLVTHGNRQIKGV-HPGSFVPCTRSDQQNMILSLAAIQDWELRH---------------IFVKVPVEYREFPGAVGRLDKAINGLMQAGRCWTMKITADLTVNSFEQSHADPCVFRKIVDEEVVAVIIVCVDDLLISTKGPKILDELLADLRLDHKFKHLEDAKRYLGCHIIRDRKKMKIKIDQHLYARSIAERFGIAKTRMLPATAGSNTMIKNDEPKTSEEAEEMRAFPYREAVEMLVWAATMMPSDITHSVRTTASFCENPGVAHKRAVVKIL*----TADLRITYGGQDYGVEMMAYADSNYATRQNSRHSVSGTAVLLEG 1050
+E +G + G ++ V+ P + VS+ + K ++G ++K+K R+V G Q+ V + S PC S ++L++A + L H +F ++P + + + ++AI GL Q+GR W L N FEQ ADPCVFRK+VDE VV +I++ VDD+L++ +ELLA L K+L + + + GC I RD + ++I Q Y S+ ERF + T +PAT G++ K ++ EE +P R+A+ ++W +T D++ + R A P H A+ KIL T DL ITY + G+ Y D++YA ++SR S SG A + G
Sbjct: 867 EEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDKFKARVVARGFSQLPNVDYFRSSSPCPSSASIMLMLAVANEKGMNLNHWDVKQASPHATLDEEVFPRLPAGCGDKSHQIVKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDED-CEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVRKAIGSMMWVSTFSRPDVSFAARAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGPSVYVDASYADTEDSR-SGSGLATTVGG 1227
BLAST of mRNA_H-paniculata_contig2077.5399.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY) HSP 1 Score: 159 bits (401), Expect = 6.560e-39 Identity = 116/374 (31.02%), Postives = 187/374 (50.00%), Query Frame = 1
Query: 4 EMQGLIDNGVWTQVECPNNKLVVSTMMLYKKKIGEDGSVEKYKCRLVTHGNRQIKGVH-PGSFVPCTRSDQQNMILSLAAIQDWEL---------------RHIFVKVPVEYREFPGAVGRLDKAINGLMQAGRCWTMKITADLTVNSFEQSHADPCVFRKIVDEEVVAVIIVCVDDLLISTKGPKILDELLADLRLDHKFKHLEDAKRYLGCHIIRDRKKMKIKIDQHLYARSIAERFGIAKTRMLPATAGSNTMIKNDEPKTSEEAEEMRAFPYREAVEMLVWAATMMPSDITHSVRTTASFCENPGVAHKRAVVKIL*----TADLRITYGGQDY----GVEMMAYADSNYATRQNSRHSVSGTAVLLEGG 1053
++QG+ G W + P ++ V ++++K ++G V KYK RLV G QI G+ +F P R + IL+LA + +WE+ I+++ P + + G + RL K + GL Q+GR W K+ +LT +++ ADPCV+ E V +I V VDDLL+ T PK+++EL DL+ + L + ++ +G I RDR+ KI+I Q Y SI +R+ + + N ++ +EEA++ A Y V L++AA DI+++V+T + + P H A ++L T DL ITY +D G + Y D++YA+ + R SVSG L GG
Sbjct: 932 QLQGM---GTWELQDLPKDRNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRICRLRKTLYGLKQSGREWNRKLHRELTELGYKRLEADPCVYLWERKEGEVQIITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLGEPQKIVGIEIERDREAGKIQISQQHYIESILKRYQLENANAVGMPLDPNVAFTAED--ENEEADDRLAGGYASMVGSLMYAAVGTRPDISYAVQTLSKYTACPRPVHWTAAKRVLRYLAGTRDLHITYTRRDSDAPNGNIIGGYTDTDYAS-DHDRKSVSGHVFYLGGG 1299
BLAST of mRNA_H-paniculata_contig2077.5399.1 vs. uniprot
Match: A0A6H5JRE9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRE9_9PHAE) HSP 1 Score: 156 bits (394), Expect = 5.330e-38 Identity = 115/358 (32.12%), Postives = 183/358 (51.12%), Query Frame = 1
Query: 1 QEMQGLIDNGVWTQVE-CPNNKLVVSTMMLYKKKIGEDGSVEKYKCRLVTHGNRQIKGV-HPGSFVPCTRSDQQNMILSLAAIQDWELRHIFVKVPVEY--REFPGAVGRLDKAINGLMQAGRCWTMKITADLTVNSFEQSHADPCVFRKIVDEEVVAVIIVCVDDLLISTKGPKILDELLADLRLDHKFKHLEDAKRYLGCHIIRDRKKMKIKIDQHLYARSIAERFGIAKTRMLPATAGSNTMIKNDEPKTSEEAEEMRAFPYREAVEMLVWAATMMPSDITHSVRTTASFCENPGVAHKRAVVKIL*----TADLRITYGGQDYGVEMMAYADSNYATRQNSRHSVSGTAVLLEG 1050
+E +G + G ++ V+ P + VS+ + K ++G ++ + RLV G QI V + S PC S ++L++A + L H VK + ++ + + ++AI GL Q+GR + N FEQ ADPCVFRK+VDE VV +I++ VDD+L++ +ELLA L K+L + + + GC I RD + ++I Q Y S+ ERF + T +PAT G++ K ++ EE +P REA+ ++W +T D++ +VR P H A+ KIL T DL ITY + G+ + Y D++YA ++ R SVSG A + G
Sbjct: 708 KEFEGHLGTGTFSCVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFNARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATQDEEQKIVKAERAIYGLKQSGRQFGYHAADTQVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDED-CEELLASLNKMFPTKNLGECEWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVVRHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASYADTED-RRSVSGLATTVGG 1055
BLAST of mRNA_H-paniculata_contig2077.5399.1 vs. uniprot
Match: A0A401H1G1_9APHY (Integrase catalytic domain-containing protein n=7 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H1G1_9APHY) HSP 1 Score: 154 bits (388), Expect = 3.350e-37 Identity = 118/371 (31.81%), Postives = 179/371 (48.25%), Query Frame = 1
Query: 1 QEMQGLIDNGVWTQVECPNNKLVVSTMMLYKKKIGEDGSVEKYKCRLVTHGNRQIKGV-HPGSFVPCTRSDQQNMILSLAAIQDWELR---------------HIFVKVPVEYREF-PGAVGRLDKAINGLMQAGRCWTMKITADLTVNSFEQSHADPCVFRKIVDEEVVAVIIVCVDDLLISTKGPKILDELLADLRLDHKFKHLEDAKRYLGCHIIRDRKKMKIKIDQHLYARSIAERFGIA--KTRMLPATAGSNTMIKNDEPKTSEEAEEMRAFPYREAVEMLVWAATMMPSDITHSVRTTASFCENPGVAHKRAVVKIL*----TADLRITYGGQDYGVEMMAYADSNYATRQNSRHSVSGTAVLL 1044
+E+ L+ N W V P K + + ++K K DGSVE+YK RLV G Q G + F P R +IL+LAA +D EL I+++ P + + P V RL+K++ GL Q R W K+ LT F + +D ++ I E+V ++ V +DD+ +++K K LD+ + +L+ K + L + LG I RDR K I + Q Y + ER+G++ K+ P G+ + K P+T EEAE M PY AV L++ A DI ++ A F NPG AH AV + T DLR+ YG D + Y DS++ +++R S G V +
Sbjct: 905 EEIVSLMANNTWDIVPLPPGKRAIGSGWVFKVKHNADGSVERYKGRLVAKGYSQRPGFDYTEVFAPTFRQPALRLILALAAAEDLELHSVDISSAFLNGDLEEEIYMQQPEGFHQGGPEMVCRLNKSLYGLKQGARQWNKKLHEVLTKMGFTRLQSDRSIYVYI-REDVRIIVPVFIDDMTLASKSKKALDDTVKELKSYFKLRDLGSTQFLLGIDIKRDRAKHTISLSQRQYIVDMLERYGLSDCKSVSTPMNPGAE-LSKALAPQTQEEAEYMHKVPYLSAVGALMYLAITTRPDIMFAIGCLARFNANPGPAHWIAVKHVFRYLKGTMDLRLHYGPSDVKEFFLTYTDSDFGGERDNRRSTGGYLVKV 1273
BLAST of mRNA_H-paniculata_contig2077.5399.1 vs. uniprot
Match: A0A6H5JJY0_9PHAE (CCHC-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJY0_9PHAE) HSP 1 Score: 153 bits (387), Expect = 4.140e-37 Identity = 115/372 (30.91%), Postives = 185/372 (49.73%), Query Frame = 1
Query: 1 QEMQGLIDNGVWTQVE-CPNNKLVVSTMMLYKKKIGEDGSVEKYKCRLVTHGNRQIKGV-HPGSFVPCTRSDQQNMILSLAAIQDWELRH---------------IFVKVPVEYREFPGAVGRLDKAINGLMQAGRCWTMKITADLTVNSFEQSHADPCVFRKIVDEEVVAVIIVCVDDLLISTKGPKILDELLADLRLDHKFKHLEDAKRYLGCHIIRDRKKMKIKIDQHLYARSIAERFGIAKTRMLPATAGSNT-MIKNDEPKTSEEAEEMRAFPYREAVEMLVWAATMMPSDITHSVRTTASFCENPGVAHKRAVVKIL*----TADLRITYGGQDYGVEMMAYADSNYATRQNSRHSVSGTAVLLEG 1050
+E +G + G ++ V+ P VS+ + K+ ++G ++K+K RLV G QI V + S PC S ++L++A + L H +F+K+P + + + + AI GL Q+ R W L N FE+ AD CVFRK+VDE VV +I++ DD+L++ +ELLA L K+L + + + GC I RD + ++I Q Y S+ +RF + T +PAT G++ I+ DE E +P REA+ ++W +T D++ +VR A +P H A+ +L T DL ITY + G+ + Y D++YA ++ R SVSG A + G
Sbjct: 644 EEFEGHLGTGTFSFVDGAPEGHRPVSSKWCFSWKVNKEGRIDKFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAHTHATLDEEVFLKLPAGCGDRSYKIVKAEPAIYGLKQSERQWGYLAADTLVENGFEECKADRCVFRKMVDEVVVMIIVIYADDILVAGSDED-CEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMLKRFDVQSTSRIPATPGADLGPIREDE--------EGGEWPVREAIGSMMWMSTFSRPDVSFAVRAAARHAHSPAERHWDAIQTVLGYLKGTRDLGITYQ-RGSGLGLAVYVDASYADTED-RRSVSGLATTVGG 1004 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2077.5399.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2077.5399.1 >prot_H-paniculata_contig2077.5399.1 ID=prot_H-paniculata_contig2077.5399.1|Name=mRNA_H-paniculata_contig2077.5399.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=304bp MQGLIDNGVWTQVECPNNKLVVSTMMLYKKKIGEDGSVEKYKCRLVTHGNback to top mRNA from alignment at H-paniculata_contig2077:20725..21949- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2077.5399.1 ID=mRNA_H-paniculata_contig2077.5399.1|Name=mRNA_H-paniculata_contig2077.5399.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1225bp|location=Sequence derived from alignment at H-paniculata_contig2077:20725..21949- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2077:20725..21949- >mRNA_H-paniculata_contig2077.5399.1 ID=mRNA_H-paniculata_contig2077.5399.1|Name=mRNA_H-paniculata_contig2077.5399.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1824bp|location=Sequence derived from alignment at H-paniculata_contig2077:20725..21949- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |