mRNA_H-paniculata_contig2077.5399.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2077.5399.1
Unique NamemRNA_H-paniculata_contig2077.5399.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig2077.5399.1 vs. uniprot
Match: A0A6H5JC10_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC10_9PHAE)

HSP 1 Score: 169 bits (429), Expect = 6.250e-43
Identity = 120/371 (32.35%), Postives = 188/371 (50.67%), Query Frame = 1
Query:    1 QEMQGLIDNGVWTQVE-CPNNKLVVSTMMLYKKKIGEDGSVEKYKCRLVTHGNRQIKGV-HPGSFVPCTRSDQQNMILSLAAIQDWELRH---------------IFVKVPVEYREFPGAVGRLDKAINGLMQAGRCWTMKITADLTVNSFEQSHADPCVFRKIVDEEVVAVIIVCVDDLLISTKGPKILDELLADLRLDHKFKHLEDAKRYLGCHIIRDRKKMKIKIDQHLYARSIAERFGIAKTRMLPATAGSNTMIKNDEPKTSEEAEEMRAFPYREAVEMLVWAATMMPSDITHSVRTTASFCENPGVAHKRAVVKIL*----TADLRITYGGQDYGVEMMAYADSNYATRQNSRHSVSGTAVLLEG 1050
            +E +G +  G ++ V+  P  +  VS+   +  K  ++G ++ +K RLV  G  QI  V +  S  PC  S    ++L++A  +   L H               +F+K+P    +    + + ++AI GL Q+GR W       L  N FEQ  ADPCVFRK+VDE VV +I++ VDD+L++       +ELLA L      K+LE+ + + GC I RD +   ++I Q  Y  S+ +RF +  T  +PA+ G +   K D+ K  E       +P REA+  ++W +T    D++ +VR  A     P   H  A+ KIL     T DL ITY  +  G+ +  Y D++YA  ++ R SVSG A  + G
Sbjct:  312 EEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHEIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDED-CEELLASLSKKFPTKNLEECQWFDGCAIERDVETGTLRISQTAYIDSMVKRFDVQSTSRIPASPGVDLGPKRDDEKGGE-------WPVREAIGSIMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASYADTED-RRSVSGLATTVGG 672          
BLAST of mRNA_H-paniculata_contig2077.5399.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 169 bits (428), Expect = 1.740e-42
Identity = 120/371 (32.35%), Postives = 188/371 (50.67%), Query Frame = 1
Query:    1 QEMQGLIDNGVWTQVE-CPNNKLVVSTMMLYKKKIGEDGSVEKYKCRLVTHGNRQIKGV-HPGSFVPCTRSDQQNMILSLAAIQDWELRH---------------IFVKVPVEYREFPGAVGRLDKAINGLMQAGRCWTMKITADLTVNSFEQSHADPCVFRKIVDEEVVAVIIVCVDDLLISTKGPKILDELLADLRLDHKFKHLEDAKRYLGCHIIRDRKKMKIKIDQHLYARSIAERFGIAKTRMLPATAGSNTMIKNDEPKTSEEAEEMRAFPYREAVEMLVWAATMMPSDITHSVRTTASFCENPGVAHKRAVVKIL*----TADLRITYGGQDYGVEMMAYADSNYATRQNSRHSVSGTAVLLEG 1050
            +E +G +  G ++ V+  P  +  VS+   +  K  ++G ++ +K RLV  G  QI  V +  S  PC  S    ++L++A  +   L H               +F+K+P    +    + + ++AI GL Q+GR W       L  N FEQ  ADPCVFRK+VDE VV +I++ VDD+L++       +ELLA L      K+L + + + GC I RD +   ++I Q  Y  S+ ERF +  T  +PAT G++   K ++       EE   +P REA+  ++W +T    D++ +VR  A     P   H  A+ KIL     T DL ITY  +  G+ +  Y D++YA  ++ R SVSG A  + G
Sbjct:  758 EEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDED-CEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASYADTED-RRSVSGLATTVGG 1118          
BLAST of mRNA_H-paniculata_contig2077.5399.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 169 bits (428), Expect = 1.870e-42
Identity = 120/371 (32.35%), Postives = 188/371 (50.67%), Query Frame = 1
Query:    1 QEMQGLIDNGVWTQVE-CPNNKLVVSTMMLYKKKIGEDGSVEKYKCRLVTHGNRQIKGV-HPGSFVPCTRSDQQNMILSLAAIQDWELRH---------------IFVKVPVEYREFPGAVGRLDKAINGLMQAGRCWTMKITADLTVNSFEQSHADPCVFRKIVDEEVVAVIIVCVDDLLISTKGPKILDELLADLRLDHKFKHLEDAKRYLGCHIIRDRKKMKIKIDQHLYARSIAERFGIAKTRMLPATAGSNTMIKNDEPKTSEEAEEMRAFPYREAVEMLVWAATMMPSDITHSVRTTASFCENPGVAHKRAVVKIL*----TADLRITYGGQDYGVEMMAYADSNYATRQNSRHSVSGTAVLLEG 1050
            +E +G +  G ++ V+  P  +  VS+   +  K  ++G ++ +K RLV  G  QI  V +  S  PC  S    ++L++A  +   L H               +F+K+P    +    + + ++AI GL Q+GR W       L  N FEQ  ADPCVFRK+VDE VV +I++ VDD+L++       +ELLA L      K+L + + + GC I RD +   ++I Q  Y  S+ ERF +  T  +PAT G++   K ++       EE   +P REA+  ++W +T    D++ +VR  A     P   H  A+ KIL     T DL ITY  +  G+ +  Y D++YA  ++ R SVSG A  + G
Sbjct: 1137 EEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDED-CEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASYADTED-RRSVSGLATTVGG 1497          
BLAST of mRNA_H-paniculata_contig2077.5399.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 169 bits (428), Expect = 1.910e-42
Identity = 120/371 (32.35%), Postives = 188/371 (50.67%), Query Frame = 1
Query:    1 QEMQGLIDNGVWTQVE-CPNNKLVVSTMMLYKKKIGEDGSVEKYKCRLVTHGNRQIKGV-HPGSFVPCTRSDQQNMILSLAAIQDWELRH---------------IFVKVPVEYREFPGAVGRLDKAINGLMQAGRCWTMKITADLTVNSFEQSHADPCVFRKIVDEEVVAVIIVCVDDLLISTKGPKILDELLADLRLDHKFKHLEDAKRYLGCHIIRDRKKMKIKIDQHLYARSIAERFGIAKTRMLPATAGSNTMIKNDEPKTSEEAEEMRAFPYREAVEMLVWAATMMPSDITHSVRTTASFCENPGVAHKRAVVKIL*----TADLRITYGGQDYGVEMMAYADSNYATRQNSRHSVSGTAVLLEG 1050
            +E +G +  G ++ V+  P  +  VS+   +  K  ++G ++ +K RLV  G  QI  V +  S  PC  S    ++L++A  +   L H               +F+K+P    +    + + ++AI GL Q+GR W       L  N FEQ  ADPCVFRK+VDE VV +I++ VDD+L++       +ELLA L      K+L + + + GC I RD +   ++I Q  Y  S+ ERF +  T  +PAT G++   K ++       EE   +P REA+  ++W +T    D++ +VR  A     P   H  A+ KIL     T DL ITY  +  G+ +  Y D++YA  ++ R SVSG A  + G
Sbjct: 1300 EEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDED-CEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASYADTED-RRSVSGLATTVGG 1660          
BLAST of mRNA_H-paniculata_contig2077.5399.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 4.710e-42
Identity = 119/371 (32.08%), Postives = 188/371 (50.67%), Query Frame = 1
Query:    1 QEMQGLIDNGVWTQVE-CPNNKLVVSTMMLYKKKIGEDGSVEKYKCRLVTHGNRQIKGV-HPGSFVPCTRSDQQNMILSLAAIQDWELRH---------------IFVKVPVEYREFPGAVGRLDKAINGLMQAGRCWTMKITADLTVNSFEQSHADPCVFRKIVDEEVVAVIIVCVDDLLISTKGPKILDELLADLRLDHKFKHLEDAKRYLGCHIIRDRKKMKIKIDQHLYARSIAERFGIAKTRMLPATAGSNTMIKNDEPKTSEEAEEMRAFPYREAVEMLVWAATMMPSDITHSVRTTASFCENPGVAHKRAVVKIL*----TADLRITYGGQDYGVEMMAYADSNYATRQNSRHSVSGTAVLLEG 1050
            +E +G +  G ++ V+  P  +  VS+   +  K  ++G ++ +K RLV  G  QI  V +  S  PC  S    ++L++A  +   L H               +F+K+P    +    + + ++AI GL Q+GR W       L  N FEQ  ADPCVFRK+VD+ VV +I++ VDD+L++       +ELLA L      K+L + + + GC I RD +   ++I Q  Y  S+ ERF +  T  +PAT G++   K ++       EE   +P REA+  ++W +T    D++ +VR  A     P   H  A+ KIL     T DL ITY  +  G+ +  Y D++YA  ++ R SVSG A  + G
Sbjct: 1157 EEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDED-CEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASYADTED-RRSVSGLATTVGG 1517          
BLAST of mRNA_H-paniculata_contig2077.5399.1 vs. uniprot
Match: A0A6H5JQW4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQW4_9PHAE)

HSP 1 Score: 159 bits (403), Expect = 3.450e-39
Identity = 116/371 (31.27%), Postives = 186/371 (50.13%), Query Frame = 1
Query:    1 QEMQGLIDNGVWTQVE-CPNNKLVVSTMMLYKKKIGEDGSVEKYKCRLVTHGNRQIKGV-HPGSFVPCTRSDQQNMILSLAAIQDWELRH---------------IFVKVPVEYREFPGAVGRLDKAINGLMQAGRCWTMKITADLTVNSFEQSHADPCVFRKIVDEEVVAVIIVCVDDLLISTKGPKILDELLADLRLDHKFKHLEDAKRYLGCHIIRDRKKMKIKIDQHLYARSIAERFGIAKTRMLPATAGSNTMIKNDEPKTSEEAEEMRAFPYREAVEMLVWAATMMPSDITHSVRTTASFCENPGVAHKRAVVKIL*----TADLRITYGGQDYGVEMMAYADSNYATRQNSRHSVSGTAVLLEG 1050
            +E +G +  G ++ V+  P  +  VS+   +  K  ++G ++K+K R+V  G  Q+  V +  S  PC  S    ++L++A  +   L H               +F ++P    +    + + ++AI GL Q+GR W       L  N FEQ  ADPCVFRK+VDE VV +I++ VDD+L++       +ELLA L      K+L + + + GC I RD +   ++I Q  Y  S+ ERF +  T  +PAT G++   K ++       EE   +P R+A+  ++W +T    D++ + R  A     P   H  A+ KIL     T DL ITY  +  G+    Y D++YA  ++SR S SG A  + G
Sbjct:  867 EEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDKFKARVVARGFSQLPNVDYFRSSSPCPSSASIMLMLAVANEKGMNLNHWDVKQASPHATLDEEVFPRLPAGCGDKSHQIVKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDED-CEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVRKAIGSMMWVSTFSRPDVSFAARAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGPSVYVDASYADTEDSR-SGSGLATTVGG 1227          
BLAST of mRNA_H-paniculata_contig2077.5399.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY)

HSP 1 Score: 159 bits (401), Expect = 6.560e-39
Identity = 116/374 (31.02%), Postives = 187/374 (50.00%), Query Frame = 1
Query:    4 EMQGLIDNGVWTQVECPNNKLVVSTMMLYKKKIGEDGSVEKYKCRLVTHGNRQIKGVH-PGSFVPCTRSDQQNMILSLAAIQDWEL---------------RHIFVKVPVEYREFPGAVGRLDKAINGLMQAGRCWTMKITADLTVNSFEQSHADPCVFRKIVDEEVVAVIIVCVDDLLISTKGPKILDELLADLRLDHKFKHLEDAKRYLGCHIIRDRKKMKIKIDQHLYARSIAERFGIAKTRMLPATAGSNTMIKNDEPKTSEEAEEMRAFPYREAVEMLVWAATMMPSDITHSVRTTASFCENPGVAHKRAVVKIL*----TADLRITYGGQDY----GVEMMAYADSNYATRQNSRHSVSGTAVLLEGG 1053
            ++QG+   G W   + P ++  V    ++++K  ++G V KYK RLV  G  QI G+    +F P  R +    IL+LA + +WE+                 I+++ P  + +  G + RL K + GL Q+GR W  K+  +LT   +++  ADPCV+     E  V +I V VDDLL+ T  PK+++EL  DL+   +   L + ++ +G  I RDR+  KI+I Q  Y  SI +R+ +     +      N     ++   +EEA++  A  Y   V  L++AA     DI+++V+T + +   P   H  A  ++L     T DL ITY  +D     G  +  Y D++YA+  + R SVSG    L GG
Sbjct:  932 QLQGM---GTWELQDLPKDRNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRICRLRKTLYGLKQSGREWNRKLHRELTELGYKRLEADPCVYLWERKEGEVQIITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLGEPQKIVGIEIERDREAGKIQISQQHYIESILKRYQLENANAVGMPLDPNVAFTAED--ENEEADDRLAGGYASMVGSLMYAAVGTRPDISYAVQTLSKYTACPRPVHWTAAKRVLRYLAGTRDLHITYTRRDSDAPNGNIIGGYTDTDYAS-DHDRKSVSGHVFYLGGG 1299          
BLAST of mRNA_H-paniculata_contig2077.5399.1 vs. uniprot
Match: A0A6H5JRE9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRE9_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 5.330e-38
Identity = 115/358 (32.12%), Postives = 183/358 (51.12%), Query Frame = 1
Query:    1 QEMQGLIDNGVWTQVE-CPNNKLVVSTMMLYKKKIGEDGSVEKYKCRLVTHGNRQIKGV-HPGSFVPCTRSDQQNMILSLAAIQDWELRHIFVKVPVEY--REFPGAVGRLDKAINGLMQAGRCWTMKITADLTVNSFEQSHADPCVFRKIVDEEVVAVIIVCVDDLLISTKGPKILDELLADLRLDHKFKHLEDAKRYLGCHIIRDRKKMKIKIDQHLYARSIAERFGIAKTRMLPATAGSNTMIKNDEPKTSEEAEEMRAFPYREAVEMLVWAATMMPSDITHSVRTTASFCENPGVAHKRAVVKIL*----TADLRITYGGQDYGVEMMAYADSNYATRQNSRHSVSGTAVLLEG 1050
            +E +G +  G ++ V+  P  +  VS+   +  K  ++G ++ +  RLV  G  QI  V +  S  PC  S    ++L++A  +   L H  VK    +  ++    + + ++AI GL Q+GR +          N FEQ  ADPCVFRK+VDE VV +I++ VDD+L++       +ELLA L      K+L + + + GC I RD +   ++I Q  Y  S+ ERF +  T  +PAT G++   K ++       EE   +P REA+  ++W +T    D++ +VR        P   H  A+ KIL     T DL ITY  +  G+ +  Y D++YA  ++ R SVSG A  + G
Sbjct:  708 KEFEGHLGTGTFSCVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFNARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATQDEEQKIVKAERAIYGLKQSGRQFGYHAADTQVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDED-CEELLASLNKMFPTKNLGECEWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVVRHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASYADTED-RRSVSGLATTVGG 1055          
BLAST of mRNA_H-paniculata_contig2077.5399.1 vs. uniprot
Match: A0A401H1G1_9APHY (Integrase catalytic domain-containing protein n=7 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H1G1_9APHY)

HSP 1 Score: 154 bits (388), Expect = 3.350e-37
Identity = 118/371 (31.81%), Postives = 179/371 (48.25%), Query Frame = 1
Query:    1 QEMQGLIDNGVWTQVECPNNKLVVSTMMLYKKKIGEDGSVEKYKCRLVTHGNRQIKGV-HPGSFVPCTRSDQQNMILSLAAIQDWELR---------------HIFVKVPVEYREF-PGAVGRLDKAINGLMQAGRCWTMKITADLTVNSFEQSHADPCVFRKIVDEEVVAVIIVCVDDLLISTKGPKILDELLADLRLDHKFKHLEDAKRYLGCHIIRDRKKMKIKIDQHLYARSIAERFGIA--KTRMLPATAGSNTMIKNDEPKTSEEAEEMRAFPYREAVEMLVWAATMMPSDITHSVRTTASFCENPGVAHKRAVVKIL*----TADLRITYGGQDYGVEMMAYADSNYATRQNSRHSVSGTAVLL 1044
            +E+  L+ N  W  V  P  K  + +  ++K K   DGSVE+YK RLV  G  Q  G  +   F P  R     +IL+LAA +D EL                 I+++ P  + +  P  V RL+K++ GL Q  R W  K+   LT   F +  +D  ++  I  E+V  ++ V +DD+ +++K  K LD+ + +L+   K + L   +  LG  I RDR K  I + Q  Y   + ER+G++  K+   P   G+  + K   P+T EEAE M   PY  AV  L++ A     DI  ++   A F  NPG AH  AV  +      T DLR+ YG  D     + Y DS++   +++R S  G  V +
Sbjct:  905 EEIVSLMANNTWDIVPLPPGKRAIGSGWVFKVKHNADGSVERYKGRLVAKGYSQRPGFDYTEVFAPTFRQPALRLILALAAAEDLELHSVDISSAFLNGDLEEEIYMQQPEGFHQGGPEMVCRLNKSLYGLKQGARQWNKKLHEVLTKMGFTRLQSDRSIYVYI-REDVRIIVPVFIDDMTLASKSKKALDDTVKELKSYFKLRDLGSTQFLLGIDIKRDRAKHTISLSQRQYIVDMLERYGLSDCKSVSTPMNPGAE-LSKALAPQTQEEAEYMHKVPYLSAVGALMYLAITTRPDIMFAIGCLARFNANPGPAHWIAVKHVFRYLKGTMDLRLHYGPSDVKEFFLTYTDSDFGGERDNRRSTGGYLVKV 1273          
BLAST of mRNA_H-paniculata_contig2077.5399.1 vs. uniprot
Match: A0A6H5JJY0_9PHAE (CCHC-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJY0_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 4.140e-37
Identity = 115/372 (30.91%), Postives = 185/372 (49.73%), Query Frame = 1
Query:    1 QEMQGLIDNGVWTQVE-CPNNKLVVSTMMLYKKKIGEDGSVEKYKCRLVTHGNRQIKGV-HPGSFVPCTRSDQQNMILSLAAIQDWELRH---------------IFVKVPVEYREFPGAVGRLDKAINGLMQAGRCWTMKITADLTVNSFEQSHADPCVFRKIVDEEVVAVIIVCVDDLLISTKGPKILDELLADLRLDHKFKHLEDAKRYLGCHIIRDRKKMKIKIDQHLYARSIAERFGIAKTRMLPATAGSNT-MIKNDEPKTSEEAEEMRAFPYREAVEMLVWAATMMPSDITHSVRTTASFCENPGVAHKRAVVKIL*----TADLRITYGGQDYGVEMMAYADSNYATRQNSRHSVSGTAVLLEG 1050
            +E +G +  G ++ V+  P     VS+   +  K+ ++G ++K+K RLV  G  QI  V +  S  PC  S    ++L++A  +   L H               +F+K+P    +    + + + AI GL Q+ R W       L  N FE+  AD CVFRK+VDE VV +I++  DD+L++       +ELLA L      K+L + + + GC I RD +   ++I Q  Y  S+ +RF +  T  +PAT G++   I+ DE        E   +P REA+  ++W +T    D++ +VR  A    +P   H  A+  +L     T DL ITY  +  G+ +  Y D++YA  ++ R SVSG A  + G
Sbjct:  644 EEFEGHLGTGTFSFVDGAPEGHRPVSSKWCFSWKVNKEGRIDKFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAHTHATLDEEVFLKLPAGCGDRSYKIVKAEPAIYGLKQSERQWGYLAADTLVENGFEECKADRCVFRKMVDEVVVMIIVIYADDILVAGSDED-CEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMLKRFDVQSTSRIPATPGADLGPIREDE--------EGGEWPVREAIGSMMWMSTFSRPDVSFAVRAAARHAHSPAERHWDAIQTVLGYLKGTRDLGITYQ-RGSGLGLAVYVDASYADTED-RRSVSGLATTVGG 1004          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2077.5399.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JC10_9PHAE6.250e-4332.35Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KSG8_9PHAE1.740e-4232.35Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JZQ8_9PHAE1.870e-4232.35Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE1.910e-4232.35Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]
A0A6H5JN00_9PHAE4.710e-4232.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQW4_9PHAE3.450e-3931.27Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A401GYH9_9APHY6.560e-3931.02Uncharacterized protein n=6 Tax=Sparassis crispa T... [more]
A0A6H5JRE9_9PHAE5.330e-3832.12Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A401H1G1_9APHY3.350e-3731.81Integrase catalytic domain-containing protein n=7 ... [more]
A0A6H5JJY0_9PHAE4.140e-3730.91CCHC-type domain-containing protein (Fragment) n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2077contigH-paniculata_contig2077:20725..21949 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score142.5
Seed ortholog evalue3.2e-31
Seed eggNOG ortholog65672.G4TWW2
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs227R3@155619,38DPC@33154,3H58M@355688,3NUZ7@4751,3UY7N@5204,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelAgaricomycetes incertae sedis
Best eggNOG OGNA|NA|NA
Exons3
Model size1168
Cds size912
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2077.5399.1prot_H-paniculata_contig2077.5399.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2077 20975..21943 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929542.9386115-UTR-H-paniculata_contig2077:20724..209741622929542.9386115-UTR-H-paniculata_contig2077:20724..20974Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2077 20725..20974 -
1691480906.2144926-UTR-H-paniculata_contig2077:20724..209741691480906.2144926-UTR-H-paniculata_contig2077:20724..20974Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2077 20725..20974 -
1622929543.0254445-UTR-H-paniculata_contig2077:21943..219491622929543.0254445-UTR-H-paniculata_contig2077:21943..21949Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2077 21944..21949 -
1691480906.2564967-UTR-H-paniculata_contig2077:21943..219491691480906.2564967-UTR-H-paniculata_contig2077:21943..21949Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2077 21944..21949 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929542.9614537-CDS-H-paniculata_contig2077:20974..209751622929542.9614537-CDS-H-paniculata_contig2077:20974..20975Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2077 20975..20975 -
1691480906.2237208-CDS-H-paniculata_contig2077:20974..209751691480906.2237208-CDS-H-paniculata_contig2077:20974..20975Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2077 20975..20975 -
1622929542.9990273-CDS-H-paniculata_contig2077:20987..216401622929542.9990273-CDS-H-paniculata_contig2077:20987..21640Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2077 20988..21640 -
1691480906.2309878-CDS-H-paniculata_contig2077:20987..216401691480906.2309878-CDS-H-paniculata_contig2077:20987..21640Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2077 20988..21640 -
1622929543.010703-CDS-H-paniculata_contig2077:21685..219431622929543.010703-CDS-H-paniculata_contig2077:21685..21943Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2077 21686..21943 -
1691480906.2385297-CDS-H-paniculata_contig2077:21685..219431691480906.2385297-CDS-H-paniculata_contig2077:21685..21943Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2077 21686..21943 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2077.5399.1

>prot_H-paniculata_contig2077.5399.1 ID=prot_H-paniculata_contig2077.5399.1|Name=mRNA_H-paniculata_contig2077.5399.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=304bp
MQGLIDNGVWTQVECPNNKLVVSTMMLYKKKIGEDGSVEKYKCRLVTHGN
RQIKGVHPGSFVPCTRSDQQNMILSLAAIQDWELRHIFVKVPVEYREFPG
AVGRLDKAINGLMQAGRCWTMKITADLTVNSFEQSHADPCVFRKIVDEEV
VAVIIVCVDDLLISTKGPKILDELLADLRLDHKFKHLEDAKRYLGCHIIR
DRKKMKIKIDQHLYARSIAERFGIAKTRMLPATAGSNTMIKNDEPKTSEE
AEEMRAFPYREAVEMLVWAATMMPSDITHSVRTTASFCENPGVAHKRAVV
KIL*
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mRNA from alignment at H-paniculata_contig2077:20725..21949-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2077.5399.1 ID=mRNA_H-paniculata_contig2077.5399.1|Name=mRNA_H-paniculata_contig2077.5399.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1225bp|location=Sequence derived from alignment at H-paniculata_contig2077:20725..21949- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGAGATGCAAGGCCTCATCGACAACGGGGTTTGGACGCAGGTGGAGTG CCCGAATAACAAGTTGGTCGTGAGCACGATGATGCTGTACAAAAAGAAAA TCGGCGAGGACGGTAGCGTGGAGAAATACAAATGCCGCCTGGTTACCCAC GGGAACCGTCAGATCAAGGGCGTTCATCCAGGAAGCTTCGTCCCCTGCAC CCGCAGCGACCAACAAAACATGATATTGTCGCTTGCGGCAATCCAGGACT GGGAGCTTCGGCACGTCGACTTTGAACAAGCGTATCTGCAGGCACCCATC GACCAGGAGATTTTCGTCAAAGTTCCCGTAGAATACCGGGAGTTCCCAGG AGCGGTGGGGCGCCTTGATAAGGCAATCAACGGGCTGATGCAAGCTGGAA GATGCTGGACTATGAAGATTACCGCGGACCTCACGGTGAACAGTTTCGAG CAATCGCACGCCGACCCGTGTGTATTTCGCAAGATCGTGGACGAGGAGGT GGTCGCAGTGATCATCGTATGCGTGGACGACCTTCTGATCAGCACCAAGG GGCCCAAAATCCTGGACGAGTTGCTGGCGGATCTGCGACTGGATCACAAG TTCAAACACCTGGAAGATGCAAAGCGCTATTTAGGATGCCACATCATCCG CGATAGGAAAAAGATGAAGATCAAGATCGACCAGCACCTCTACGCGAGGT CCATAGCCGAGCGTTTCGGGATAGCCAAGACCAGGATGCTCCCGGCCACG GCGGGAAGCAACACCATGATCAAAAACGACGAACCGAAGACCTCAGAAGA AGCCGAGGAGATGAGAGCGTTCCCATACAGGGAGGCAGTGGAGATGCTCG TGTGGGCGGCGACAATGATGCCATCCGACATCACACACTCCGTACGCACT ACGGCAAGTTTCTGTGAAAACCCAGGCGTGGCGCACAAGAGAGCTGTTGT AAAGATTCTGTAGTAAGTACTAAGGACGGCGGACCTGAGAATCACCTACG GCGGACAGGACTACGGGGTCGAAATGATGGCTTACGCTGACTCGAACTAC GCAACGCGCCAGAACAGCCGACACTCGGTCTCCGGCACAGCGGTACTGCT GGAGGGGGGGGGCAATCAATTGGCACGCGAGGACTTTGGAGGTGACAGCG GTGGGGACAAGAGAAGCTGAGTACGTCGCGTTGGCCGAGATGGTGAACGA AGTCATCCTTCTTTGTCAAGTGCAA
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Coding sequence (CDS) from alignment at H-paniculata_contig2077:20725..21949-

>mRNA_H-paniculata_contig2077.5399.1 ID=mRNA_H-paniculata_contig2077.5399.1|Name=mRNA_H-paniculata_contig2077.5399.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1824bp|location=Sequence derived from alignment at H-paniculata_contig2077:20725..21949- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCAAGGCCTCATCGACAACGGGGTTTGGACGCAGGTGGAGTGCCCGAA
TAACAAGTTGGTCGTGAGCACGATGATGCTGTACAAAAAGAAAATCGGCG
AGGACGGTAGCGTGGAGAAATACAAATGCCGCCTGGTTACCCACGGGAAC
CGTCAGATCAAGGGCGTTCATCCAGGAAGCTTCGTCCCCTGCACCCGCAG
CGACCAACAAAACATGATATTGTCGCTTGCGGCAATCCAGGACTGGGAGC
TTCGGCACATGCAAGGCCTCATCGACAACGGGGTTTGGACGCAGGTGGAG
TGCCCGAATAACAAGTTGGTCGTGAGCACGATGATGCTGTACAAAAAGAA
AATCGGCGAGGACGGTAGCGTGGAGAAATACAAATGCCGCCTGGTTACCC
ACGGGAACCGTCAGATCAAGGGCGTTCATCCAGGAAGCTTCGTCCCCTGC
ACCCGCAGCGACCAACAAAACATGATATTGTCGCTTGCGGCAATCCAGGA
CTGGGAGCTTCGGCACATTTTCGTCAAAGTTCCCGTAGAATACCGGGAGT
TCCCAGGAGCGGTGGGGCGCCTTGATAAGGCAATCAACGGGCTGATGCAA
GCTGGAAGATGCTGGACTATGAAGATTACCGCGGACCTCACGGTGAACAG
TTTCGAGCAATCGCACGCCGACCCGTGTGTATTTCGCAAGATCGTGGACG
AGGAGGTGGTCGCAGTGATCATCGTATGCGTGGACGACCTTCTGATCAGC
ACCAAGGGGCCCAAAATCCTGGACGAGTTGCTGGCGGATCTGCGACTGGA
TCACAAGTTCAAACACCTGGAAGATGCAAAGCGCTATTTAGGATGCCACA
TCATCCGCGATAGGAAAAAGATGAAGATCAAGATCGACCAGCACCTCTAC
GCGAGGTCCATAGCCGAGCGTTTCGGGATAGCCAAGACCAGGATGCTCCC
GGCCACGGCGGGAAGCAACACCATGATCAAAAACGACGAACCGAAGACCT
CAGAAGAAGCCGAGGAGATGAGAGCGTTCCCATACAGGGAGGCAGTGGAG
ATGCTCGTGTGGGCGGCGACAATGATGCCATCCGACATCACACACTCCGT
ACGCACTACGGCAAGTTTCTGTGAAAACCCAGGCGTGGCGCACAAGAGAG
CTGTTGTAAAGATTCTGTAATTTTCGTCAAAGTTCCCGTAGAATACCGGG
AGTTCCCAGGAGCGGTGGGGCGCCTTGATAAGGCAATCAACGGGCTGATG
CAAGCTGGAAGATGCTGGACTATGAAGATTACCGCGGACCTCACGGTGAA
CAGTTTCGAGCAATCGCACGCCGACCCGTGTGTATTTCGCAAGATCGTGG
ACGAGGAGGTGGTCGCAGTGATCATCGTATGCGTGGACGACCTTCTGATC
AGCACCAAGGGGCCCAAAATCCTGGACGAGTTGCTGGCGGATCTGCGACT
GGATCACAAGTTCAAACACCTGGAAGATGCAAAGCGCTATTTAGGATGCC
ACATCATCCGCGATAGGAAAAAGATGAAGATCAAGATCGACCAGCACCTC
TACGCGAGGTCCATAGCCGAGCGTTTCGGGATAGCCAAGACCAGGATGCT
CCCGGCCACGGCGGGAAGCAACACCATGATCAAAAACGACGAACCGAAGA
CCTCAGAAGAAGCCGAGGAGATGAGAGCGTTCCCATACAGGGAGGCAGTG
GAGATGCTCGTGTGGGCGGCGACAATGATGCCATCCGACATCACACACTC
CGTACGCACTACGGCAAGTTTCTGTGAAAACCCAGGCGTGGCGCACAAGA
GAGCTGTTGTAAAGATTCTGTAGG
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