mRNA_H-paniculata_contig20747.5388.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig20747.5388.1 vs. uniprot
Match: A0A6H5L0H6_9PHAE (CoA_binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L0H6_9PHAE) HSP 1 Score: 123 bits (308), Expect = 3.760e-34 Identity = 61/77 (79.22%), Postives = 67/77 (87.01%), Query Frame = 1
Query: 10 MNALVSTFLAADRFAVVGASANPTKFGNKVLRTYLWKEKAVTPINPREEEIEGQKCVKSLSELVQPQDVAVSVVTPP 240
MN LV FLAADRFAVVGAS N +KFGNKVLR YLW+EK V P+NPREEEIEG+KCVKSLS+L PQDV+VSVVTPP
Sbjct: 1 MNTLVRNFLAADRFAVVGASTNRSKFGNKVLRCYLWREKTVFPVNPREEEIEGKKCVKSLSDLADPQDVSVSVVTPP 77
BLAST of mRNA_H-paniculata_contig20747.5388.1 vs. uniprot
Match: A0A0H2S0Q8_9AGAM (NAD(P)-binding protein n=1 Tax=Schizopora paradoxa TaxID=27342 RepID=A0A0H2S0Q8_9AGAM) HSP 1 Score: 84.3 bits (207), Expect = 6.870e-19 Identity = 42/80 (52.50%), Postives = 58/80 (72.50%), Query Frame = 1
Query: 1 LRSMNALVSTFLAADRFAVVGASANPTKFGNKVLRTYLWKEKAVTPINPREEEIEGQKCVKSLSELVQPQDVAVSVVTPP 240
+R++ + TFL+A RFAVVGAS + KFG KVLR Y +E VTP++P+E+E+EG K V LSEL P + +VS++TPP
Sbjct: 1 MRTLAEIQRTFLSAPRFAVVGASKDQAKFGTKVLRWYQARELDVTPVHPKEQELEGVKTVSQLSELPSPSETSVSIITPP 80
BLAST of mRNA_H-paniculata_contig20747.5388.1 vs. uniprot
Match: A0A067PLC4_9AGAM (CoA_binding domain-containing protein n=1 Tax=Jaapia argillacea MUCL 33604 TaxID=933084 RepID=A0A067PLC4_9AGAM) HSP 1 Score: 82.8 bits (203), Expect = 1.860e-18 Identity = 39/80 (48.75%), Postives = 59/80 (73.75%), Query Frame = 1
Query: 1 LRSMNALVSTFLAADRFAVVGASANPTKFGNKVLRTYLWKEKAVTPINPREEEIEGQKCVKSLSELVQPQDVAVSVVTPP 240
+ S + TFL+A RFAVVGAS + +K+G KVLR YL + K VTP++P+E+E+EG V++L++L P + A+S++TPP
Sbjct: 1 MASAREIQKTFLSAPRFAVVGASKDASKYGTKVLRWYLARNKPVTPVHPKEDELEGIATVRTLADLPSPSETAISIITPP 80
BLAST of mRNA_H-paniculata_contig20747.5388.1 vs. uniprot
Match: A0A836CBV2_9STRA (CoA-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBV2_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 3.450e-18 Identity = 45/74 (60.81%), Postives = 56/74 (75.68%), Query Frame = 1
Query: 22 VSTFLAADRFAVVGASANPTKFGNKVLRTYLWKEKAVTPINPREEEIEGQKCVKSLSELVQPQ-DVAVSVVTPP 240
V FLA R+AVVGAS + TK+GNK LR YL ++AVTP+NP+ IEG CV SLS+L +P+ +VAVSVVTPP
Sbjct: 14 VVAFLAHPRYAVVGASQDRTKYGNKCLRCYLQHDRAVTPVNPKAMAIEGVACVASLSQLPEPRSEVAVSVVTPP 87
BLAST of mRNA_H-paniculata_contig20747.5388.1 vs. uniprot
Match: W7TQK0_9STRA (Binding domain protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQK0_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 9.580e-18 Identity = 43/75 (57.33%), Postives = 52/75 (69.33%), Query Frame = 1
Query: 16 ALVSTFLAADRFAVVGASANPTKFGNKVLRTYLWKEKAVTPINPREEEIEGQKCVKSLSELVQPQDVAVSVVTPP 240
A + FL+A FAVVGAS N KFGNKVLR Y+ K++TPINP+E IEG + +LS L P + AVSVVTPP
Sbjct: 4 AKIPAFLSASSFAVVGASTNREKFGNKVLRCYIQHGKSITPINPKERMIEGIAALANLSSLPNPTNTAVSVVTPP 78
BLAST of mRNA_H-paniculata_contig20747.5388.1 vs. uniprot
Match: A0A4Q9QA15_9APHY (NAD(P)-binding protein n=3 Tax=Dichomitus squalens TaxID=114155 RepID=A0A4Q9QA15_9APHY) HSP 1 Score: 80.5 bits (197), Expect = 1.500e-17 Identity = 36/80 (45.00%), Postives = 60/80 (75.00%), Query Frame = 1
Query: 1 LRSMNALVSTFLAADRFAVVGASANPTKFGNKVLRTYLWKEKAVTPINPREEEIEGQKCVKSLSELVQPQDVAVSVVTPP 240
+ S+ + TFL++ ++AVVGAS + TKFG KVL+ Y +E+ VTP++P+E+E+EG K V+S+ +L P + ++S++TPP
Sbjct: 1 MSSLAEVQKTFLSSPKYAVVGASKDQTKFGTKVLKWYQTREQDVTPVHPKEDELEGVKTVRSIGDLPSPSETSISIITPP 80
BLAST of mRNA_H-paniculata_contig20747.5388.1 vs. uniprot
Match: A0A433PKT1_9FUNG (NAD-binding protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PKT1_9FUNG) HSP 1 Score: 80.5 bits (197), Expect = 1.570e-17 Identity = 40/74 (54.05%), Postives = 54/74 (72.97%), Query Frame = 1
Query: 19 LVSTFLAADRFAVVGASANPTKFGNKVLRTYLWKEKAVTPINPREEEIEGQKCVKSLSELVQPQDVAVSVVTPP 240
L + F+++ FAVVGAS++P KFGNKVL+ Y+ K+VTPINP++ EI G KS+SEL P + A+SV TPP
Sbjct: 7 LQAEFMSSKYFAVVGASSDPNKFGNKVLKWYIEHNKSVTPINPKDAEISGIPAKKSISELEHPTETAISVTTPP 80
BLAST of mRNA_H-paniculata_contig20747.5388.1 vs. uniprot
Match: A0A0D2WSM2_CAPO3 (CoA_binding domain-containing protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WSM2_CAPO3) HSP 1 Score: 80.1 bits (196), Expect = 2.070e-17 Identity = 40/73 (54.79%), Postives = 51/73 (69.86%), Query Frame = 1
Query: 22 VSTFLAADRFAVVGASANPTKFGNKVLRTYLWKEKAVTPINPREEEIEGQKCVKSLSELVQPQDVAVSVVTPP 240
++ FLA +FAVVGASA+P+K GN VL Y K V P+NP+ EIEG CV SLS+L +P +VSV+TPP
Sbjct: 15 IAQFLATQKFAVVGASADPSKIGNSVLLKYKQANKHVVPVNPKAPEIEGLVCVTSLSQLTEPSRYSVSVITPP 87
BLAST of mRNA_H-paniculata_contig20747.5388.1 vs. uniprot
Match: A0A3M1MLK2_9DELT (CoA-binding protein (Fragment) n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3M1MLK2_9DELT) HSP 1 Score: 78.2 bits (191), Expect = 2.430e-17 Identity = 41/74 (55.41%), Postives = 54/74 (72.97%), Query Frame = 1
Query: 22 VSTFLAADRFAVVGASANPTKFGNKVLRTYLWKEKAVTPINPREEEIEGQKCVKSLSELVQPQDV-AVSVVTPP 240
++ FLAA F VVGAS NP K+GNKVLR YL ++ V P+NP E IEG CVKS+++L P +V ++SV+TPP
Sbjct: 7 IAKFLAAQAFGVVGASTNPAKYGNKVLRCYLQNQRRVVPVNPVAETIEGLPCVKSVADL--PGEVKSISVITPP 78
BLAST of mRNA_H-paniculata_contig20747.5388.1 vs. uniprot
Match: A0A2Z6RCI7_9GLOM (CoA_binding domain-containing protein n=6 Tax=Rhizophagus TaxID=1129544 RepID=A0A2Z6RCI7_9GLOM) HSP 1 Score: 79.7 bits (195), Expect = 2.930e-17 Identity = 41/77 (53.25%), Postives = 54/77 (70.13%), Query Frame = 1
Query: 19 LVSTFLAADRFAVVGASANPTKFGNKVLRTYLWKEKAVTPINPREEEIEGQKCVKSLSELVQP---QDVAVSVVTPP 240
L+ F ++ +AVVGAS NPTK+GNKVL+ Y+ + VTPINP E IEG +CV +LS L+ DV+VSV+TPP
Sbjct: 10 LIKEFFSSSHYAVVGASNNPTKYGNKVLKWYISNNRPVTPINPNERLIEGLECVPNLSSLISNLNHADVSVSVITPP 86 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20747.5388.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig20747.5388.1 >prot_H-paniculata_contig20747.5388.1 ID=prot_H-paniculata_contig20747.5388.1|Name=mRNA_H-paniculata_contig20747.5388.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=77bp MNALVSTFLAADRFAVVGASANPTKFGNKVLRTYLWKEKAVTPINPREEEback to top mRNA from alignment at H-paniculata_contig20747:3095..3712+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig20747.5388.1 ID=mRNA_H-paniculata_contig20747.5388.1|Name=mRNA_H-paniculata_contig20747.5388.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=618bp|location=Sequence derived from alignment at H-paniculata_contig20747:3095..3712+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig20747:3095..3712+ >mRNA_H-paniculata_contig20747.5388.1 ID=mRNA_H-paniculata_contig20747.5388.1|Name=mRNA_H-paniculata_contig20747.5388.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=462bp|location=Sequence derived from alignment at H-paniculata_contig20747:3095..3712+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |