mRNA_H-paniculata_contig20714.5379.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig20714.5379.1
Unique NamemRNA_H-paniculata_contig20714.5379.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig20714.5379.1 vs. uniprot
Match: A0A6H5KJN3_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJN3_9PHAE)

HSP 1 Score: 446 bits (1147), Expect = 1.900e-133
Identity = 260/558 (46.59%), Postives = 333/558 (59.68%), Query Frame = 3
Query: 1701 STVSVMVDSGASGHYFDDTLIPGLRYKLFNYQELTVPRKITTAGGHQLAGVGQGLLRGHINDSEGVKRLVQISCLVVPGLGRNLFSVKQATRNGVVSIFDMNNPRLETNNFTVPLQELESD---LYFFSLEI----------TSGSGAPGLAMQAADTATLWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDCDICAVGKSHQLAHPKTADNQVQRAFQLVMTDLMGPIMPEALGGFKYACKISDEYTRWTEIYLLKTKDGALHAFQSFIQSMVIPGGVRVERLRADKGGEFIGNDFRSYCRQTGVLLEFASTNTPQQIGMSERVGRTLAAMVRCMLADSGLPTFLWGELMFTAAYLANRAPHSALGMQSPHKMLKGTEPDLRHLRVIGARAFVHIERHTPKLALKAVEGRLVGYSNHSKSYRVYNPATRRIIESRNVVFIET---PPHLTPTGEPQLLIHPSSPSDSEGHNYATDDDFLRDLRDHTSVLAQPARVSVDHATASGVSSNPQVAELLERISTITRRDMLHDDATPREGT-------SPASPEGGEPPE 3305
            S++ ++VDSGA+ +Y D  L PG+R  + + ++L +P  I TAG H L GV  G+L G + D  G  R V    ++VPGLG NLFSV  A  NGV S+F  +NPRLE+ +  VP++    D       S+ I          T G    GLA++  +TA LWHRRMGH+N  SL++L+    +G+D+ G V DC  C +GKS Q  HPK A   V   FQLV  D +GP  P ALGGFKYA K  D++T+W E+ L+K K  ++ A + F +  VIP   R+  LRADKG EF    +R YC   G+ L+FAS NTP QIG +ER GRT+  +VRCMLADS LP+ LWGELM TA YL+NR PH+AL   +P+K L GT+  L HLRV+GARAFVH E HT KL  +A EGRLVGYS  SKSYR+YN  TRR+ ESRNV+FIET   PP L   G            D     YA  DD +RD+R++T+        SVD  + +    +P V ELLE IST+  RD+  + A P           S ASP G  PPE
Sbjct:  416 SSILMLVDSGATDNYLDPALTPGVRAHMRDIEDLRIPLPIITAGQHVLHGVTTGVLFGTVTDDSGQDRQVSFRVVLVPGLGTNLFSVTAALSNGVASLFYPDNPRLESADAVVPMKIQGVDNTGKITCSITIKLGAENGGRQTPGETPDGLALRV-ETADLWHRRMGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGKSSQQPHPKHAVYGVSTPFQLVFVDTLGPFTPTALGGFKYATKFVDQHTKWKEVVLMKDKTCSIDALELFNKGTVIPRSARIHVLRADKGTEFTNAAYRQYCLDVGIQLQFASPNTPHQIGANERAGRTIMNIVRCMLADSTLPSLLWGELMQTAVYLSNRTPHAALHNGTPYKALFGTDAHLGHLRVVGARAFVHEETHTKKLDSRAWEGRLVGYSLDSKSYRIYNAQTRRVRESRNVIFIETTPAPPSLDERG-----------FDDGEFTYADHDDMIRDVRNYTT------NHSVDALSPTHAVGDPSVLELLEDISTVHNRDLGTNSADPAPAAEDAPADDSLASPGGVSPPE 955          
BLAST of mRNA_H-paniculata_contig20714.5379.1 vs. uniprot
Match: A0A6H5JYB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYB5_9PHAE)

HSP 1 Score: 431 bits (1109), Expect = 7.710e-128
Identity = 255/559 (45.62%), Postives = 327/559 (58.50%), Query Frame = 3
Query: 1701 STVSVMVDSGASGHYFDDTLIPGLRYKLFNYQELTVPRKITTAGGHQLAGVGQGLLRGHINDSEGVKRLVQISCLVVPGLGRNLFSVKQATRNGVVSIFDMNNPRLETNNFTVPLQELESD---LYFFSLEI----------TSGSGAPGLAMQAADTATLWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDCDICAVGKSHQLAHPKTADNQVQRAFQLVMTDLMGPIMPEALGGFKYACKISDEYTRWTEIYLLKTKDG-ALHAFQSFIQSMVIPGGVRVERLRADKGGEFIGNDFRSYCRQTGVLLEFASTNTPQQIGMSERVGRTLAAMVRCMLADSGLPTFLWGELMFTAAYLANRAPHSALGMQSPHKMLKGTEPDLRHLRVIGARAFVHIERHTPKLALKAVEGRLVGYSNHSKSYRVYNPATRRIIESRNVVFIET---PPHLTPTGEPQLLIHPSSPSDSEGHNYATDDDFLRDLRDHTSVLAQPARVSVDHATASGVSSNPQVAELLERISTITRRDMLHDDATPREGT-------SPASPEGGEPPE 3305
            S++ ++ DSGA+ +Y D  L PG+R  + + ++L +P  I TAG H L GV  G+L G + D  G  R V    ++VPGLG NLFSV  A  NGV S+F  +NPRLE+ +  VP++    D       S+ I          T G    GLA++  +TA LWHRRMGH+N  SL++L+    +G+D+ G V DC  C +GKS Q  HPK A   V   FQLV  D  GP     LGGFKYA K  D++T+W E+ L+K K   ++   + F +  VIP   R+  LRA KG EF    +R YC   G+ L+FAS NTP QIG +ER GRT+  +VRCMLADS LP+ LWGELM TA YL+NR PH+AL   +P+K L GT+  L HLRV+GARAFVH E HT KL  +A EGRLVGYS  SKSYR+YN  TRR+ ESRNV+FIET   PP L   G            D     YA  DD +RD+R++T+        SVD  + +    +P V ELLE IST+  RD+  + A P           S ASP G  PPE
Sbjct:  321 SSILMLEDSGATDNYLDPALTPGVRAHMRDIEDLRIPLPIITAGQHVLHGVTTGVLFGTVTDDSGQDRQVSFRVVLVPGLGTNLFSVTAALSNGVASLFYPDNPRLESADAVVPMKIQGVDNTGKITCSITIKLGAENGGRQTPGETPDGLALRV-ETADLWHRRMGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGKSSQQPHPKHAVYGVSTPFQLVFVDTFGPFTSTTLGGFKYATKFVDQHTKWKEVVLMKDKTSCSIDGLELFNKGTVIPRSARIHVLRAGKGAEFTNAAYRQYCLDVGIQLQFASPNTPHQIGANERAGRTIMNIVRCMLADSTLPSLLWGELMQTAVYLSNRTPHAALHNGTPYKALFGTDAHLGHLRVVGARAFVHEETHTKKLDSRAWEGRLVGYSLDSKSYRIYNAQTRRVRESRNVIFIETNPAPPSLDERG-----------FDDGEFTYADHDDMIRDVRNYTT------NHSVDALSPTHAVGDPSVLELLEDISTVHNRDLGTNSADPAPAAEDAPADDSLASPGGVSPPE 861          
BLAST of mRNA_H-paniculata_contig20714.5379.1 vs. uniprot
Match: A0A6H5J842_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J842_9PHAE)

HSP 1 Score: 433 bits (1113), Expect = 9.410e-125
Identity = 246/518 (47.49%), Postives = 315/518 (60.81%), Query Frame = 3
Query: 1701 STVSVMVDSGASGHYFDDTLIPGLRYKLFNYQELTVPRKITTAGGHQLAGVGQGLLRGHINDSEGVKRLVQISCLVVPGLGRNLFSVKQATRNGVVSIFDMNNPRLETNNFTVPLQELESD---LYFFSLEI----------TSGSGAPGLAMQAADTATLWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDCDICAVGKSHQLAHPKTADNQVQRAFQLVMTDLMGPIMPEALGGFKYACKISDEYTRWTEIYLLKTKDGALHAFQSFIQSMVIPGGVRVERLRADKGGEFIGNDFRSYCRQTGVLLEFASTNTPQQIGMSERVGRTLAAMVRCMLADSGLPTFLWGELMFTAAYLANRAPHSALGMQSPHKMLKGTEPDLRHLRVIGARAFVHIERHTPKLALKAVEGRLVGYSNHSKSYRVYNPATRRIIESRNVVFIETPPHLTPTGEPQLLIHPSSPSDSEGHNYATDDDFLRDLRDHTSVLAQPARVSVDHATASGVSSNPQVAELLERIS 3215
            S++ ++VDSGA+ +Y D  L PG+R  + + ++L +P  I TAG H L GV  G+L G + D  G  R V    ++VPGLG NLFSV  A  NGV S+F  +NPRLE+ +  VP++    D       S+ I          T G    GLA++  +TA LWHRRMGH+N  SL++L+    +G+D+ G V DC  C +GKS Q  HPK A   V   FQLV  D +GP  P ALGGFKYA K  D++T+W E+ L+K K  ++ A + F +  VIP   R+  LRADKG EF    +R YC   G+ L+FAS NTP QIG +ER GRT+  +VRCMLADS LP+ LWGELM TA YL+NR PH+AL   +P+K L GT+  L HLRV+GARAFVH E HT KL  +A EGRLVGYS  SKSYR+YN  TRR+ ESRNV+FIE      PT  P  L       D     YA  DD +RD+R++T+        SVD    +    +P V ELLE IS
Sbjct:  416 SSILMLVDSGATDNYLDPALTPGVRAHMRDIEDLRIPLPIITAGQHVLHGVTTGVLFGTVTDDSGQDRRVSFRVMLVPGLGNNLFSVTAALSNGVASLFYPDNPRLESADAVVPMKIQGVDNTGKITCSITIKLGAENGGRQTPGETPDGLALRV-ETADLWHRRMGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGKSSQQPHPKHAVYGVSTPFQLVFVDTLGPFTPTALGGFKYATKFVDQHTKWKEVVLMKDKTCSIDALELFNKGTVIPRSARIHVLRADKGTEFTNAAYRQYCLDVGIQLQFASPNTPHQIGANERAGRTIMNIVRCMLADSTLPSLLWGELMQTAVYLSNRTPHAALHNGTPNKALFGTDAHLGHLRVVGARAFVHEETHTKKLDSRAWEGRLVGYSLDSKSYRIYNAQTRRVRESRNVMFIE------PTPAPPSLDERGF--DDGEFTYADHDDMIRDMRNYTT------NHSVDALPPTHAVGDPSVLELLEDIS 918          
BLAST of mRNA_H-paniculata_contig20714.5379.1 vs. uniprot
Match: A0A6H5JKW9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKW9_9PHAE)

HSP 1 Score: 358 bits (920), Expect = 5.330e-102
Identity = 258/684 (37.72%), Postives = 343/684 (50.15%), Query Frame = 3
Query: 1077 GGDGKPQWCSLHMTNNHSDEECRVLQRHNNNNQ------GANFAQWSSYSTVTGTGEQPPAISFNALKTPSTNNPSDNSSKAEDLWPFAPTSEPVA--AFDS---SGLFGAFGGVNG--------GETGGLSLTVNDGPEE---------GLELRRRANNMLQVIREAMSPLARVLAIMAV----------------VHYVWLMFGSSLYQRATSNNNLNSKPETFRGITDVDDGSALAAGPAFEKWNDDNNSTVSVMVDSGASGHYFDDTLIPGLRYKLFNYQELTVPRKITTAGGHQLAGVGQGLLRGHINDSEGVKRLVQISCLVVPGLGRNLFSVKQATRNGVVSIFDMNNPRLETNNFTVPLQELESDLYFFSLEITSGSGAPGLAMQAADTATLWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDCDICAVGKSHQLAHPKTADNQVQRAFQLVMTDLMGPIMPEALGGFKYACKISDEYTRWTEIYLLKTKDGALHAFQSFIQSMVIPGGVRVERLRADKGGEFIGNDFRSYCRQTGVLLEFASTNTPQQIGMSERVGRTLAAMVRCMLADSGLPTFLWGELMFTAAYLANRAPHSALGMQSPHKMLKGTEPDLRHLRVIGARAFVHIERHTPKLALKAVEGRLVGYSNHSKSYRVYNPATRRIIESRNVVFIETP 2996
            GG  +P+WCS H T  HSD EC+  +    N Q       AN A   S S              N L+         N   A      A +S  VA  A  S   SG FGAF   +          +   + + V+ G  +         GL    R    L+V    ++   RVL  +A                 V +  ++  +S    +TSN   +  P  F G        A  A  +   +  D  S++ ++VD GA  +Y D  L PGLR  + + + L VP  I  AG   L GV  G + G + D  G  R V    ++VPGLG  LFSV  A   GV ++   +N RLE+ +   P+Q L        ++ T+G     + +++AD   LWHRRMGH+N  SL++L+    NGVD+ G V DC +C +GKS Q  HPK A   V R FQ V  D +GP  P AL GFK A K  D+  +          +G+L  F    +  V+P G R+  LR D+G EF   +FR YC+  G+ LEFA+ NTPQQIG ++R  RT+  +V C+LADS LP FLWGEL+ TA YL++R PH+AL   +P+K L G +  L HLRVIG+RAFVH E HT KL  +A EGRL GYS  SKSYR+YN  TRR+  SRNVVFIETP
Sbjct:  284 GGSVQPKWCSYHNTKTHSDAECQKQKEIRENKQKELEGLAANLALLQSASHA------------NFLRL-------SNKGSAH----LAQSSPAVAQQARQSRLRSGFFGAFMATHAELSLAPFRSDGSSIRMVVDRGARDNYLDPGLTPGLRAHMRDVKYLRVPHTIVAAGQRVLKGVATGTIFGAVTDDNGNDRHVSFC-VVLAASASASSTSNAQAHRLPSGFFGAF-----MATHAELSLAPFRSD-GSSIRMVVDRGARDNYLDPGLTPGLRAHMRDVKYLRVPHTIVAAGQRVLKGVATGTIFGAVTDDNGNDRHVSFCVVLVPGLGTKLFSVTLAMLKGVATLCHPDNHRLESGDVVFPMQTL-------GVDATTGKRIYSIEVESAD---LWHRRMGHINGKSLDVLRKEPVNGVDYTGDVKDCSVCPLGKSAQQPHPKQATYGVLRPFQHVSVDTLGPFTPTALSGFKVATKFVDQKDK-------ACSEGSLALFN---KGTVVPTGERIHCLRGDQGTEFTSAEFRQYCQDIGIELEFAAPNTPQQIGPNDRARRTILNVVHCLLADSTLPNFLWGELIQTAVYLSSRVPHAALQNGTPYKALYGKDAYLGHLRVIGSRAFVHEETHTRKLEHRAREGRL-GYSMDSKSYRIYNSETRRVRVSRNVVFIETP 916          
BLAST of mRNA_H-paniculata_contig20714.5379.1 vs. uniprot
Match: A0A6H5KL37_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL37_9PHAE)

HSP 1 Score: 343 bits (880), Expect = 1.410e-98
Identity = 194/419 (46.30%), Postives = 252/419 (60.14%), Query Frame = 3
Query: 1980 GVVSIFDMNNPRLETNNFTVPLQELESDLYFFSLEITSGSGAPGLAMQAADTATLWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDCDICAVGKSHQLAHPKTADNQVQRAFQLVMTDLMGPIMPEALGGFKYACKISDEYTRWTEIYLLKTKDGALHAFQSFIQSMVIPGGVRVERLRADKGGEFIGNDFRSYCRQTGVLLEFASTNTPQQIGMSERVGRTLAAMVRCMLADSGLPTFLWGELMFTAAYLANRAPHSALGMQSPHKMLKGTEPDLRHLRVIGARAFVHIERHTPKLALKAVEGRLVGYSNHSKSYRVYNPATRRIIESRNVVFIETPPHLTPTGEPQLLIHPSSPSDSEGHNYATDDDFLRDLRDHTSVLAQPARVSVDHATASGVSSNPQVAELLERISTITRRDM 3236
            GV ++F  +NPRLE+ +   P+Q L        ++ T+G     + +++AD   LWHRRMGH+N  +L++L+    NGVD+ G V  C +C +GKS Q  HPK A   V R FQ    D +GP  P ALGG KYA K  D+ T+W EI L+K +  ++ +   F +  V+P G R+  LR D+G EF   +FR YC+  G+ LEFAS N PQQIG +ER GRT+  +VRC+LADS LP FLWGEL+ TA YL+NR PH+AL   +P+K L G +  L HLRVIG+RAFVH E HT KL  +A EGRLVGYS  SKSYR+YN  TRR+  SRNVVFIETPP      E           D     Y T DD +RD+R++T         S+D         +  V ELLE+I   T RD+
Sbjct:    4 GVATLFHPDNPRLESGDVFFPMQTL-------GVDATTGKRIYSIKVESAD---LWHRRMGHINGKNLDVLRKEQVNGVDYTGDVKYCSVCPLGKSAQQPHPKQATYGVLRPFQ---HDTLGPFAPTALGGSKYATKFVDQQTKWAEIVLMKDETCSVDSLALFNKGTVVPTGERIHCLRGDQGTEFTSAEFRQYCQDIGIKLEFASPNIPQQIGANERAGRTILNVVRCLLADSTLPNFLWGELIQTAVYLSNRVPHAALQNGTPYKALYGKDAYLGHLRVIGSRAFVHEETHTRKLEHRAWEGRLVGYSMDSKSYRIYNSETRRVRVSRNVVFIETPPVAPALDEFGF--------DDREFTYDTHDDMVRDVRNYT------FNHSIDSLPPDHDVGDIPVIELLEQIHETTNRDL 395          
BLAST of mRNA_H-paniculata_contig20714.5379.1 vs. uniprot
Match: A0A6H5JC75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC75_9PHAE)

HSP 1 Score: 346 bits (888), Expect = 2.420e-97
Identity = 195/432 (45.14%), Postives = 252/432 (58.33%), Query Frame = 3
Query: 1764 PGLRYKLFNYQELTVPRKITTAGGHQLAGVGQGLLRGHINDSEGVKRLVQISCLVVPGLGRNLFSVKQATRNGVVSIFDMNNPRLETNNFTVPLQELESD------LYFFSLEITSGSGAPGLAMQAAD-------TATLWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDCDICAVGKSHQLAHPKTADNQVQRAFQLVMTDLMGPIMPEALGGFKYACKISDEYTRWTEIYLLKTKDGALHAFQSFIQSMVIPGGVRVERLRADKGGEFIGNDFRSYCRQTGVLL-------EFASTNTPQQIGMSERVGRTLAAMVRCMLADSGLPTFLWGELMFTAAYLANRAPHSALGMQSPHKMLKGTEPDLRHLRVIGARAFVHIERHTPKLALKAVEGRLVGYSNHSKSYRVYNPATRRIIESRNVVFIETPP 2999
            PGLR  + + + L VP  I  AG H L GV  G   G + D  G  R V    ++VPGL  NLFSV  A   G  ++   ++PRLE+ +  +P+Q L  D      +Y   +++   +G P +   A D       +A LWHRRMGH+N   L++L+    NGVD+ G V DC +     +            V R FQ V  D +GP  P ALGGFKYA K  ++ T+W EI L+K K  ++ +   F +  V+P G R+  LR D+G EF   +FR YC+   + L       EFAS NTPQQIG + R GRT+  +VRC+LADS LP FLWGEL+ TA YL+NR PH+AL   +P+K L G +  L HLRVIG+RAFVH   HT KL  +A EGRLVGYS  SKSYR+YN  TRR+  SRNVVFIETPP
Sbjct:  452 PGLRAHMRDVEHLRVPHTIVAAGQHVLKGVATGTFFGAVTDDNGTDRHVSFCVILVPGLSTNLFSVTLAMLKGEATLVHPDDPRLESGDVVIPMQTLGVDTTTGKRIYSIEVKLGGEAGGPMVLEDAPDALALKVESADLWHRRMGHINGKRLDVLRKEPVNGVDYTGDVKDCHLRR--PAPLXXXXXXXXXXVLRPFQHVSVDTVGPFKPTALGGFKYATKFVEQQTKWEEIVLMKDKPCSVDSLALFNKGTVVPAGERIPCLRGDQGTEFTSAEFRQYCQNISIKLXNISIKLEFASPNTPQQIGANARAGRTILNVVRCLLADSTLPNFLWGELIQTAVYLSNRVPHAALQNGTPYKALYGKDAYLGHLRVIGSRAFVHEATHTRKLEHRAWEGRLVGYSTVSKSYRIYNSETRRVRVSRNVVFIETPP 881          
BLAST of mRNA_H-paniculata_contig20714.5379.1 vs. uniprot
Match: A0A6H5KY84_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY84_9PHAE)

HSP 1 Score: 342 bits (877), Expect = 4.640e-95
Identity = 184/444 (41.44%), Postives = 257/444 (57.88%), Query Frame = 3
Query: 1725 SGASGHYFDDTLIPGLRYKLFNYQELTVPRKITTAGGHQLAGVGQGLLRGHINDSEGVKRLVQISCLVVPGLGRNLFSVKQATRNGVVSIFDMNNPRLET-------NNFTVPLQELESDLYFFSLEITSGSGAPG---------------LAMQAADTATLWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDCDICAVGKSHQLAHPKTADNQVQRAFQLVMTDLMGPIMPEALGGFKYACKISDEYTRWTEIYLLKTKDGALHAFQSFIQSMVIPGGVRVERLRADKGGEFIGNDFRSYCRQTGVLLEFASTNTPQQIGMSERVGRTLAAMVRCMLADSGLPTFLWGELMFTAAYLANRAPHSALGMQSPHKMLKGTEPDLRHLRVIGARAFVHIERHTPKLALKAVEGRLVGYSNHSKSYRVYNPATRRIIESRNVVFIE 2990
            SGASGHY D  L+P L   L ++  +T P KI  AGG +L G  +G++     D EG  R V+  C VVPGLGR+LFS   A + G  +I   + PR+E        +   + L+E+ + LYF  + + +                     +A   A+   LWHRR+ H ++  +     + + GV     +  C+ C + KS Q  HPKTA +   +  Q V TDL+GPI P A GGF Y  K +DEY+R   +YL++TKD A+   + FI  +VIP G R+ERLR+D GGE+    +  +C+  G++ EF +  TPQQ G+SER GRTL  +VRC+L    LP +LWGEL  TA ++ NR PH  L  ++P+  + G +  LRHLRVIG+ AFVH+E +  KLA +A  G LVGYS +S +YR+YNP T+RI+ SRNV FIE
Sbjct:  311 SGASGHYLDSELLPDLENILDDFTYITTPTKIIGAGGIELEGTSKGIISVFAKDEEGNDRRVRFKCTVVPGLGRHLFSTGTAQKKGANTIMS-DQPRIELPATSRDGSTIALVLREVGT-LYFLDVRLDTNQCERRRRITEENMNTYENSYVAAPRAEPYNLWHRRLAHCHKGIIEAAARIKETGVKLTDNLDPCETCKLQKSTQRKHPKTAKHTAVQPCQRVYTDLLGPISPPAKGGFNYVSKFTDEYSRMNVVYLIRTKDEAIDTLERFIDDIVIPNGFRLERLRSDCGGEYTAEYYTKFCKTIGIVQEFTAPATPQQNGISERAGRTLMNIVRCLLHGGQLPEYLWGELCCTAVHITNRLPHVHLNNETPYYRMFGKQASLRHLRVIGSSAFVHVETYKSKLANRAWPGILVGYSPNSNAYRIYNPHTKRIVPSRNVTFIE 752          
BLAST of mRNA_H-paniculata_contig20714.5379.1 vs. uniprot
Match: A0A6H5KVF6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF6_9PHAE)

HSP 1 Score: 325 bits (833), Expect = 4.100e-94
Identity = 174/423 (41.13%), Postives = 244/423 (57.68%), Query Frame = 3
Query: 1707 VSVMVDSGASGHYFDDTLIPGLRYKLFNYQELTVPRKITTAGGHQLAGVGQGLLRGHINDSEGVKRLVQISCLVVPGLGRNLFSVKQATRNGVVSIFDMNNPRLETNNFTVPLQELESDLYFFSLEIT-----SGSGAPGLAMQAADTAT--------------LWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDCDICAVGKSHQLAHPKTADNQVQRAFQLVMTDLMGPIMPEAL---GGFKYACKISDEYTRWTEIYLLKTKDGALHAFQSFIQSMVIPGGVRVERLRADKGGEFIGNDFRSYCRQTGVLLEFASTNTPQQIGMSERVGRTLAAMVRCMLADSGLPTFLWGELMFTAAYLANRAPHSALGMQSPHKMLKGTEPDLRHLRVIGARAFVHIERHTPKLALKAVEGRLVGY 2909
            V ++VD+GAS   FD+ LIP     L +Y +   P+ +  AG  QL G   G+L   + D+ G +  V+I  L+VPGLGRN+FS     + G+  + + + P L      +PL +   D    +L+IT       SG   L      + T               WHRR+GHLN  SL++L+      VD+  ++  C +C + K  Q  HPK +  ++ R  QLV+ D MGP+ P A    G F YACK++D+YT+  E+YLL+ K     A  ++   +   GG R+E +R DKGGE  G++FR YC+ + + LE+A+TNTPQQIG+SER G+TLA + RC+L D   P  +WGELM TAAYL NR+PHSALG  +P+  L+   PDL  LRVIGARAFVH ER+  KL  +A EG+L G+
Sbjct:  206 VGLLVDTGASEPMFDNRLIPD--GNLHDYTQRNSPKIVDVAGERQLKGTATGILHCTVKDNRGQQLRVRIQGLIVPGLGRNIFSPTSLLKRGLRCVGEKSTPHLTIQGKVIPLTQDPRDQGMCTLDITFEQNVQPSGTKSLVPHQKQSQTHTANAVCFTLVSADTWHRRLGHLNARSLDILRKDTGTEVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKVTDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLRNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGF 626          
BLAST of mRNA_H-paniculata_contig20714.5379.1 vs. uniprot
Match: A0A6H5KAG6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAG6_9PHAE)

HSP 1 Score: 327 bits (839), Expect = 4.590e-91
Identity = 187/492 (38.01%), Postives = 268/492 (54.47%), Query Frame = 3
Query: 1704 TVSVMVDSGASGHYFDDTLIPGLRYKLFNYQELTVPRKITTAGGHQLAGVGQGLLRGHINDSEGVKRLVQISCLVVPGLGRNLFSVKQATRNGVVSIFDMNNPRLETNNFTVPLQELES--DLYFFSLEITSGSGAP----------GLAMQAADT----------------------------------------ATLWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDCDICAVGKSHQLAHPKTAD-NQVQRAFQLVMTDLMGPIMPEALGGFKYACKISDEYTRWTEIYLLKTKDGALHAFQSFIQSMVIPGGVRVERLRADKGGEFIGNDFRSYCRQTGVLLEFASTNTPQQIGMSERVGRTLAAMVRCMLADSGLPTFLWGELMFTAAYLANRAPHSALGMQSPHKMLKGTEPDLRHLRVIGARAFVHIERHTPKLALKAVEGRLVGYSNHSKSYRVYNPATRRIIESRNVVFIETPPHLTPTGE 3020
            T ++ VD+GAS H+ D+ LIP L  ++  Y ++  P  I  AG  QL G  +G L+  + D  G  R +++  + VP LGR+LFS   A + GV S F  +   L+T  F +PL+  ++   L+ F L I   S A            L  ++A+T                                        A  WH+R+GH N   L  L  +D +GV    +   C  C + KS Q  HPK A+ + +    QLV TDL+GPI P A+GG+ Y  K +D  TR   +Y +  K  AL +  +++Q + IP G+RV+ L +D GGE++ +DFR YCR TG++  F+S +TPQQ G+SER GRT+  M RC++ ++ LP  LWGE+  T+ +L NR PH AL   +P+  + G + +L  LR+IG+RAFVHIE HT KL  KA EG LVGY++ S ++R+YN  T RI  +RNV FIE PP + P  E
Sbjct:   42 TFTMTVDTGASNHFLDNELIPALEQRMVEYTKIDPPLLIHVAGQGQLHGTAKGALKVTVTDQNGNPRSIRLPFICVPKLGRHLFSGGTARKQGV-STFIGSTSFLDTGVFKIPLRPDDACDTLFHFDLAIAPDSVATHHAFSTISGLDLPTESANTVYTSASASSASSTTTGAVAGARPAXXXXXXXXXXXXXTASANTWHQRLGHPNVQVLEQLARIDGSGVHLRDSFSACGTCKINKSSQQNHPKIANMDGITERLQLVSTDLLGPISPSAIGGYNYMAKFTDHATRLKAVYFIAKKGDALSSLVNYVQDVAIPLGLRVQYLHSDNGGEYVNSDFRDYCRTTGIIQRFSSPHTPQQNGISERDGRTIMNMARCIINETNLPKHLWGEIAATSVFLINRLPHKALKGDTPYFRMFGKQANLSFLRIIGSRAFVHIEGHTTKLQAKAWEGVLVGYNDDSPTFRIYNRTTGRITSTRNVTFIEKPPAVLPIVE 532          
BLAST of mRNA_H-paniculata_contig20714.5379.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 330 bits (846), Expect = 8.010e-90
Identity = 216/540 (40.00%), Postives = 277/540 (51.30%), Query Frame = 3
Query: 1869 RGHINDSEGVKRLVQISCLVVPGLGRNLFSVKQATRNGVVSIFDMNNPRLETNNFTVPLQELESD---LYFFSLEI----------TSGSGAPGLAMQAADTATLWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDCDICAVGKSHQLAHPKTADNQVQRAFQLVMTDLMGPIMPEALGGFKYACKISDEYTRWTEIYLLKTKDGALHAFQSFIQSMVIPGGVRVERLRADKGGEFIGNDFRSYCRQTGVLLEFASTNTPQQIGMSERVGRTLAAMVRCMLADSGLPTFLWGELMFTAAYLANRAPHSALGMQSPHKMLKGTEPDLRHLRVIGARAFVHIERHTPKLALKAVEGRLVGYSNHSKSYRVYNPATRRII--------------------------------------ESRNVVFIET---PPHLTPTGEPQLLIHPSSPSDSEGHNYATDDDFLRDLRDHTSVLAQPARVSVDHATASGVSSNPQVAELLERISTITRRDMLHDDATPREGT-------SPASPEGGEPPE 3305
            RGH+ D          +C +VPGLG NLFSV  A  NGV S+F  +NPRLE+ +  VP++    D       S+ I          T G    GL ++  +TA LWHRRMGH+N  SL++L+    +G+D+ G V DC  C +GKS Q  HPK A   V   FQLV  D +GP  P ALGGFKYA K  D++T+W E+ L+K K  ++ A + F +  VIP   R+  LRADKG EF    +R YC   G+ L+FAS NTP QIG +ER GRT+  +VRCMLADS LP+ LWGELM TA YL+NR PH+AL           T+  L HLRV+GARAFVH E HT KL     + R V  SN +    ++N    + +                                      ESRN +FIET   PP L   G            D     YA  DD +RD+R++T+        SVD  + +    +P V ELLE IST+  RD+  + A P           S ASP G  PPE
Sbjct:  602 RGHVQDCS--------ACPLVPGLGTNLFSVTAALSNGVASLFYPDNPRLESADAVVPMKIQGVDNTGKITCSITIKLGAENGGRQTPGETPDGLPLRV-ETADLWHRRMGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGKSSQQPHPKHAVYGVSTPFQLVFVDTLGPFTPTALGGFKYATKFVDQHTKWKEVVLMKDKTCSIDALELFNKGTVIPRSARIHVLRADKGTEFTNAAYRQYCLDVGIQLQFASPNTPHQIGANERAGRTIMNIVRCMLADSTLPSLLWGELMQTAVYLSNRTPHAALHNXXXXXXXFSTDAHLGHLRVVGARAFVHEETHTKKL-----DSRXVYLSNRTPHAALHNGTPYKALFGTDAHLGHLRVVGARAFVHEETHTKKLDSRAWEGRRGESRNGIFIETNPAPPSLDERG-----------FDDGEFTYADHDDMIRDVRNYTT------NHSVDALSPTHAVGDPSVLELLEDISTVHNRDLGTNSADPAPAAEDAPADDSLASPGGVSPPE 1110          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20714.5379.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJN3_9PHAE1.900e-13346.59Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5JYB5_9PHAE7.710e-12845.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J842_9PHAE9.410e-12547.49Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5JKW9_9PHAE5.330e-10237.72Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KL37_9PHAE1.410e-9846.30Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JC75_9PHAE2.420e-9745.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KY84_9PHAE4.640e-9541.44Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KVF6_9PHAE4.100e-9441.13Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KAG6_9PHAE4.590e-9138.01Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KJH6_9PHAE8.010e-9040.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20714contigH-paniculata_contig20714:242..4526 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score232.3
Seed ortholog evalue8.5e-58
Seed eggNOG ortholog4081.Solyc11g062200.1.1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Mitochondrial protein
EggNOG OGs37THH@33090,3GG2K@35493,44UC5@71274,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelasterids
Best eggNOG OGNA|NA|NA
Exons2
Model size3628
Cds size2514
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20714.5379.1prot_H-paniculata_contig20714.5379.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig20714 242..2755 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929540.7588985-CDS-H-paniculata_contig20714:241..27551622929540.7588985-CDS-H-paniculata_contig20714:241..2755Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20714 242..2755 -
1691480905.242252-CDS-H-paniculata_contig20714:241..27551691480905.242252-CDS-H-paniculata_contig20714:241..2755Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20714 242..2755 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929540.7741876-UTR-H-paniculata_contig20714:2755..36401622929540.7741876-UTR-H-paniculata_contig20714:2755..3640Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig20714 2756..3640 -
1691480905.2516928-UTR-H-paniculata_contig20714:2755..36401691480905.2516928-UTR-H-paniculata_contig20714:2755..3640Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig20714 2756..3640 -
1622929540.789122-UTR-H-paniculata_contig20714:4299..45261622929540.789122-UTR-H-paniculata_contig20714:4299..4526Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig20714 4300..4526 -
1691480905.2691765-UTR-H-paniculata_contig20714:4299..45261691480905.2691765-UTR-H-paniculata_contig20714:4299..4526Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig20714 4300..4526 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig20714.5379.1

>prot_H-paniculata_contig20714.5379.1 ID=prot_H-paniculata_contig20714.5379.1|Name=mRNA_H-paniculata_contig20714.5379.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=838bp
MTNNHSDEECRVLQRHNNNNQGANFAQWSSYSTVTGTGEQPPAISFNALK
TPSTNNPSDNSSKAEDLWPFAPTSEPVAAFDSSGLFGAFGGVNGGETGGL
SLTVNDGPEEGLELRRRANNMLQVIREAMSPLARVLAIMAVVHYVWLMFG
SSLYQRATSNNNLNSKPETFRGITDVDDGSALAAGPAFEKWNDDNNSTVS
VMVDSGASGHYFDDTLIPGLRYKLFNYQELTVPRKITTAGGHQLAGVGQG
LLRGHINDSEGVKRLVQISCLVVPGLGRNLFSVKQATRNGVVSIFDMNNP
RLETNNFTVPLQELESDLYFFSLEITSGSGAPGLAMQAADTATLWHRRMG
HLNRNSLNLLKTVDDNGVDFGGAVPDCDICAVGKSHQLAHPKTADNQVQR
AFQLVMTDLMGPIMPEALGGFKYACKISDEYTRWTEIYLLKTKDGALHAF
QSFIQSMVIPGGVRVERLRADKGGEFIGNDFRSYCRQTGVLLEFASTNTP
QQIGMSERVGRTLAAMVRCMLADSGLPTFLWGELMFTAAYLANRAPHSAL
GMQSPHKMLKGTEPDLRHLRVIGARAFVHIERHTPKLALKAVEGRLVGYS
NHSKSYRVYNPATRRIIESRNVVFIETPPHLTPTGEPQLLIHPSSPSDSE
GHNYATDDDFLRDLRDHTSVLAQPARVSVDHATASGVSSNPQVAELLERI
STITRRDMLHDDATPREGTSPASPEGGEPPEKTVAPSQDGASQSTETSST
EPPLNHPHHTHHQVTPAVTRAGVAARSFRERNANNDSPASTHLAAIANDK
TLSELRQLGLYTNALLPDVAHQTFEAESVVEYAYTTTS
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mRNA from alignment at H-paniculata_contig20714:242..4526-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig20714.5379.1 ID=mRNA_H-paniculata_contig20714.5379.1|Name=mRNA_H-paniculata_contig20714.5379.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4285bp|location=Sequence derived from alignment at H-paniculata_contig20714:242..4526- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCTTCTGTCTACACTCCTAGCGCTGCGTATCCGCACGCTTGGCTTAACTG CCACTGGCGTCAGCCTTTGCGACCACGCCAAGAAAACGTCTACGGACATT TTCTAACAGGTTTTTTGAGCCTCGCCTTTTTTCGCTTGTCGCACACGGAG CGGGCGCTGGGAGAACCCTCGGGATTTGGAGCAGCAGCATAAGGCCACCA AGGGACTTCTGCTGGCTGGAGGACAACGTGAGTTGAGTCAGAGTATAGGG CGCACTACATCTGTGCGCGTCGGGCACTACAACAGTGCGTCGAAGTAAAG GCGGCACGACATCCGTGCGCGTCTGGTATCAGCACGGCACGACCCTGATA CAGTGGGACCGTGATCCTTGTTTTGAAGGAAAAAAAGTCGCACAACAACG GTGGCCGTCTACATTAGCACTGGAGCTGAAACGAAGTACGTAGCACTCTT GAGTTTAGGGGCACTACGGCAGTGCGTCGCAACCTGAACTGAGTAGGGCG CGGGACTTATTTTGGAAGGGCTGCTCTACATCTGAGCGTGTCAAACACTG TACAGCTGATCTGTGAAAACGGTCAGTGTTCGGATCCCTTTGTGGAAAAC GTTTGTACGCATCCACACGTGAAATGGACAGCCGTGCACGAGCTGTAACA AACATTGTAAGTTATAATATTATCACCTGATGTCCTCAATGACATGTTAA GCGGCGGTGAGCAGGGCTGTTTCTGTTGTGGGGGACTGTACGTTAGGTGT TCTTTTCTCCATCTACCCCTTCTTCTTCGTTTTGGGAATTTGAGGCTAAG CGGCGTCGGACCCGGCTGCTACTGCGTTAAGGGACATCAATCCTGACCGC AACATCTCCTACTCTTGTTGTTTTTTCTCACTTCAGTTGATCTGGATTAC CAATGGCAGACAACGACAAGGGTATTCAAGGGGTGCTGAAGCTCTGCCCG AAATTCGATGGCAGAGACAGAGCCAGTTTCAGGGAGTACAAAGACAAACT CCGGGTTGTATTTTCCCTCCACCACAAGGCGGCCGCAGATATTTTACAGG GCCAGCCGAGACCCGAAACCACCCTAATCGGCGATGACACGCCGCCCCGC AATGCGGCAGCCCTGATGGCGTGGGACAGTGCCAACCATGACCTATTCAG TGTACTGTTTTTCAGCACAGAAAAATCCGCGAATAATACCGTCAGACGCC ATATGGGGAAAACCTACGACGATGGGGTAGGGAACGGGCAAGGAGCGTGG GCAGCGCTGCAATACAAGTATGACGGCAACACCAAGGAAGCACGGAGGGA GTGCCACGACAAACTCCACACAACAATGATGCAGTCCGGAGATGATCCGG AAGATTTCCTCTTCGTCATGGATGGTTATCGCGACCGTTTGGAGGAAATG GAGCAACCCATACCTGACGAACGCTACGAGGACATTATTCTCCGAGCCCT CCCCGCTGAGTACGAAAGGGTTCGTATTGCCAGTTGCGAGAAACGTGACT TCAATTTGGCGGACATTCGACACATGGTTAGCACCATGTACACCGACTAC CTCTCCCGCCCGAATACCGCAAACCTGGTCGCAGGCCGCGGAGTCGCCAT GCAGGCAAGTGGGGGAAGTGATGGCGGCAGAAGGAACCACATAACATGTT TCTTTTGCGGGAAGCGAGGCCACCTGAAAAGAGACTGCACCGCTCGGAAT AAGGGCCAAGCGGTGACCGGGGAACACAAAAAAATGGGGGAGACGGGAAA CCACAATGGTGCTCTCTCCACATGACCAACAACCACAGTGACGAAGAATG CCGTGTCTTGCAAAGACACAACAACAACAACCAGGGAGCAAACTTTGCAC AGTGGTCAAGCTACTCCACAGTCACCGGCACAGGGGAACAGCCTCCGGCC ATCTCTTTCAACGCCTTGAAAACGCCGAGCACGAACAATCCCTCGGACAA TTCCTCAAAGGCGGAGGACCTCTGGCCGTTCGCCCCCACAAGCGAACCTG TTGCTGCTTTCGACAGCAGCGGGCTCTTCGGTGCCTTCGGAGGGGTCAAC GGCGGGGAGACTGGGGGGCTGTCTCTCACAGTGAACGACGGGCCAGAAGA GGGACTGGAGCTTCGGCGCCGAGCTAACAATATGCTGCAGGTGATCAGGG AGGCAATGTCTCCACTAGCCCGTGTATTAGCGATAATGGCCGTGGTACAT TACGTCTGGTTAATGTTCGGTAGCTCATTATACCAGCGGGCAACATCGAA CAATAACCTCAACAGCAAGCCTGAAACATTTCGCGGCATCACCGACGTGG ATGATGGGTCGGCCCTTGCGGCGGGACCGGCCTTTGAAAAGTGGAACGAC GACAACAACAGTACTGTCAGCGTAATGGTGGACAGTGGGGCGTCGGGGCA CTACTTCGACGATACCCTTATTCCCGGATTGCGGTACAAACTCTTCAACT ACCAGGAGCTAACTGTACCGCGTAAGATCACAACCGCAGGAGGGCATCAA TTGGCAGGGGTCGGCCAGGGACTGCTACGCGGGCACATCAACGACAGCGA AGGGGTAAAACGTTTGGTTCAGATCTCGTGCTTGGTCGTACCTGGCTTGG GGCGGAACTTGTTCTCCGTCAAGCAAGCGACACGAAACGGAGTTGTATCC ATTTTCGACATGAACAACCCGAGGCTAGAAACGAACAACTTCACCGTCCC GCTCCAGGAGCTGGAGAGCGATCTATATTTCTTCTCGCTGGAAATAACCA GCGGTAGCGGCGCGCCTGGACTGGCAATGCAAGCTGCAGATACCGCCACA CTTTGGCATCGGCGAATGGGACACTTGAATCGCAACAGTTTGAACCTCCT GAAGACGGTCGATGACAACGGGGTGGACTTCGGTGGAGCCGTACCGGATT GTGACATTTGTGCCGTTGGGAAAAGTCATCAACTGGCTCATCCGAAGACA GCCGACAACCAAGTGCAACGCGCCTTCCAGCTAGTCATGACAGATTTGAT GGGACCGATCATGCCGGAGGCGCTCGGGGGCTTCAAGTACGCTTGCAAAA TTTCCGACGAGTACACGAGATGGACGGAGATTTACCTCCTGAAGACCAAG GACGGAGCACTTCACGCATTCCAGTCATTCATACAGTCAATGGTCATTCC CGGCGGCGTTCGGGTCGAGCGACTAAGGGCGGACAAAGGGGGTGAGTTTA TTGGCAACGATTTTAGAAGCTACTGCCGGCAGACAGGCGTATTGCTAGAG TTCGCAAGCACCAACACACCACAACAAATCGGTATGTCAGAACGCGTCGG GAGGACGCTCGCAGCCATGGTCCGGTGCATGCTTGCCGACAGCGGTTTGC CAACCTTTCTCTGGGGGGAACTGATGTTCACAGCGGCGTATCTTGCAAAC AGAGCACCACACTCCGCGCTCGGCATGCAATCTCCTCATAAGATGCTGAA GGGAACGGAACCGGATCTTCGACACCTTCGAGTTATCGGAGCCAGAGCTT TCGTACATATCGAGCGGCACACCCCAAAACTCGCTCTTAAGGCAGTCGAA GGACGGTTAGTTGGGTACAGTAATCACAGCAAGAGCTACCGGGTCTACAA TCCGGCCACCCGACGTATCATTGAGAGCAGGAACGTCGTCTTCATCGAGA CGCCACCACATCTTACGCCAACGGGGGAGCCACAACTTCTGATACACCCG TCTTCACCTAGCGACAGTGAGGGCCACAATTACGCCACCGACGACGACTT CTTACGTGATCTTCGCGATCACACCTCCGTACTAGCTCAACCAGCTCGTG TGTCTGTCGATCATGCCACTGCCAGCGGGGTCTCTAGCAATCCACAGGTG GCCGAGCTTCTGGAAAGGATCAGTACCATCACCCGGCGGGATATGCTGCA CGACGATGCCACACCTCGTGAAGGGACGTCACCAGCATCACCGGAAGGCG GCGAACCGCCGGAGAAAACTGTGGCTCCTTCACAGGACGGAGCTAGCCAG TCCACGGAGACATCATCAACCGAACCACCGCTCAACCACCCTCACCACAC TCATCACCAAGTGACTCCTGCGGTGACACGCGCGGGTGTCGCAGCACGCT CCTTCAGGGAACGCAACGCCAACAACGACAGCCCAGCTTCCACGCATCTT GCAGCAATTGCCAACGACAAAACGCTCTCCGAGCTACGACAACTGGGACT ATACACCAATGCGCTCCTACCGGATGTCGCACATCAAACGTTTGAGGCAG AATCAGTCGTGGAGTATGCCTACACCACGACCAGC
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Coding sequence (CDS) from alignment at H-paniculata_contig20714:242..4526-

>mRNA_H-paniculata_contig20714.5379.1 ID=mRNA_H-paniculata_contig20714.5379.1|Name=mRNA_H-paniculata_contig20714.5379.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=5028bp|location=Sequence derived from alignment at H-paniculata_contig20714:242..4526- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACCAACAACCACAGTGACGAAGAATGCCGTGTCTTGCAAAGACACAA
CAACAACAACCAGGGAGCAAACTTTGCACAGTGGTCAAGCTACTCCACAG
TCACCGGCACAGGGGAACAGCCTCCGGCCATCTCTTTCAACGCCTTGAAA
ACGCCGAGCACGAACAATCCCTCGGACAATTCCTCAAAGGCGGAGGACCT
CTGGCCGTTCGCCCCCACAAGCGAACCTGTTGCTGCTTTCGACAGCAGCG
GGCTCTTCGGTGCCTTCGGAGGGGTCAACGGCGGGGAGACTGGGGGGCTG
TCTCTCACAGTGAACGACGGGCCAGAAGAGGGACTGGAGCTTCGGCGCCG
AGCTAACAATATGCTGCAGGTGATCAGGGAGGCAATGTCTCCACTAGCCC
GTGTATTAGCGATAATGGCCGTGGTACATTACGTCTGGTTAATGTTCGGT
AGCTCATTATACCAGCGGGCAACATCGAACAATAACCTCAACAGCAAGCC
TGAAACATTTCGCGGCATCACCGACGTGGATGATGGGTCGGCCCTTGCGG
CGGGACCGGCCTTTGAAAAGTGGAACGACGACAACAACAGTACTGTCAGC
GTAATGGTGGACAGTGGGGCGTCGGGGCACTACTTCGACGATACCCTTAT
TCCCGGATTGCGGTACAAACTCTTCAACTACCAGGAGCTAACTGTACCGC
GTAAGATCACAACCGCAGGAGGGCATCAATTGGCAGGGGTCGGCCAGGGA
CTGCTACGCGGGCACATCAACGACAGCGAAGGGGTAAAACGTTTGGTTCA
GATCTCGTGCTTGGTCGTACCTGGCTTGGGGCGGAACTTGTTCTCCGTCA
AGCAAGCGACACGAAACGGAGTTGTATCCATTTTCGACATGAACAACCCG
AGGCTAGAAACGAACAACTTCACCGTCCCGCTCCAGGAGCTGGAGAGCGA
TCTATATTTCTTCTCGCTGGAAATAACCAGCGGTAGCGGCGCGCCTGGAC
TGGCAATGCAAGCTGCAGATACCGCCACACTTTGGCATCGGCGAATGGGA
CACTTGAATCGCAACAGTTTGAACCTCCTGAAGACGGTCGATGACAACGG
GGTGGACTTCGGTGGAGCCGTACCGGATTGTGACATTTGTGCCGTTGGGA
AAAGTCATCAACTGGCTCATCCGAAGACAGCCGACAACCAAGTGCAACGC
GCCTTCCAGCTAGTCATGACAGATTTGATGGGACCGATCATGCCGGAGGC
GCTCGGGGGCTTCAAGTACGCTTGCAAAATTTCCGACGAGTACACGAGAT
GGACGGAGATTTACCTCCTGAAGACCAAGGACGGAGCACTTCACGCATTC
CAGTCATTCATACAGTCAATGGTCATTCCCGGCGGCGTTCGGGTCGAGCG
ACTAAGGGCGGACAAAGGGGGTGAGTTTATTGGCAACGATTTTAGAAGCT
ACTGCCGGCAGACAGGCGTATTGCTAGAGTTCGCAAGCACCAACACACCA
CAACAAATCGGTATGTCAGAACGCGTCGGGAGGACGCTCGCAGCCATGGT
CCGGTGCATGCTTGCCGACAGCGGTTTGCCAACCTTTCTCTGGGGGGAAC
TGATGTTCACAGCGGCGTATCTTGCAAACAGAGCACCACACTCCGCGCTC
GGCATGCAATCTCCTCATAAGATGCTGAAGGGAACGGAACCGGATCTTCG
ACACCTTCGAGTTATCGGAGCCAGAGCTTTCGTACATATCGAGCGGCACA
CCCCAAAACTCGCTCTTAAGGCAGTCGAAGGACGGTTAGTTGGGTACAGT
AATCACAGCAAGAGCTACCGGGTCTACAATCCGGCCACCCGACGTATCAT
TGAGAGCAGGAACGTCGTCTTCATCGAGACGCCACCACATCTTACGCCAA
CGGGGGAGCCACAACTTCTGATACACCCGTCTTCACCTAGCGACAGTGAG
GGCCACAATTACGCCACCGACGACGACTTCTTACGTGATCTTCGCGATCA
CACCTCCGTACTAGCTCAACCAGCTCGTGTGTCTGTCGATCATGCCACTG
CCAGCGGGGTCTCTAGCAATCCACAGGTGGCCGAGCTTCTGGAAAGGATC
AGTACCATCACCCGGCGGGATATGCTGCACGACGATGCCACACCTCGTGA
AGGGACGTCACCAGCATCACCGGAAGGCGGCGAACCGCCGGAGAAAACTG
TGGCTCCTTCACAGGACGGAGCTAGCCAGTCCACGGAGACATCATCAACC
GAACCACCGCTCAACCACCCTCACCACACTCATCACCAAGTGACTCCTGC
GGTGACACGCGCGGGTGTCGCAGCACGCTCCTTCAGGGAACGCAACGCCA
ACAACGACAGCCCAGCTTCCACGCATCTTGCAGCAATTGCCAACGACAAA
ACGCTCTCCGAGCTACGACAACTGGGACTATACACCAATGCGCTCCTACC
GGATGTCGCACATCAAACGTTTGAGGCAGAATCAGTCGTGGAGTATGCCT
ACACCACGACCAGCATGACCAACAACCACAGTGACGAAGAATGCCGTGTC
TTGCAAAGACACAACAACAACAACCAGGGAGCAAACTTTGCACAGTGGTC
AAGCTACTCCACAGTCACCGGCACAGGGGAACAGCCTCCGGCCATCTCTT
TCAACGCCTTGAAAACGCCGAGCACGAACAATCCCTCGGACAATTCCTCA
AAGGCGGAGGACCTCTGGCCGTTCGCCCCCACAAGCGAACCTGTTGCTGC
TTTCGACAGCAGCGGGCTCTTCGGTGCCTTCGGAGGGGTCAACGGCGGGG
AGACTGGGGGGCTGTCTCTCACAGTGAACGACGGGCCAGAAGAGGGACTG
GAGCTTCGGCGCCGAGCTAACAATATGCTGCAGGTGATCAGGGAGGCAAT
GTCTCCACTAGCCCGTGTATTAGCGATAATGGCCGTGGTACATTACGTCT
GGTTAATGTTCGGTAGCTCATTATACCAGCGGGCAACATCGAACAATAAC
CTCAACAGCAAGCCTGAAACATTTCGCGGCATCACCGACGTGGATGATGG
GTCGGCCCTTGCGGCGGGACCGGCCTTTGAAAAGTGGAACGACGACAACA
ACAGTACTGTCAGCGTAATGGTGGACAGTGGGGCGTCGGGGCACTACTTC
GACGATACCCTTATTCCCGGATTGCGGTACAAACTCTTCAACTACCAGGA
GCTAACTGTACCGCGTAAGATCACAACCGCAGGAGGGCATCAATTGGCAG
GGGTCGGCCAGGGACTGCTACGCGGGCACATCAACGACAGCGAAGGGGTA
AAACGTTTGGTTCAGATCTCGTGCTTGGTCGTACCTGGCTTGGGGCGGAA
CTTGTTCTCCGTCAAGCAAGCGACACGAAACGGAGTTGTATCCATTTTCG
ACATGAACAACCCGAGGCTAGAAACGAACAACTTCACCGTCCCGCTCCAG
GAGCTGGAGAGCGATCTATATTTCTTCTCGCTGGAAATAACCAGCGGTAG
CGGCGCGCCTGGACTGGCAATGCAAGCTGCAGATACCGCCACACTTTGGC
ATCGGCGAATGGGACACTTGAATCGCAACAGTTTGAACCTCCTGAAGACG
GTCGATGACAACGGGGTGGACTTCGGTGGAGCCGTACCGGATTGTGACAT
TTGTGCCGTTGGGAAAAGTCATCAACTGGCTCATCCGAAGACAGCCGACA
ACCAAGTGCAACGCGCCTTCCAGCTAGTCATGACAGATTTGATGGGACCG
ATCATGCCGGAGGCGCTCGGGGGCTTCAAGTACGCTTGCAAAATTTCCGA
CGAGTACACGAGATGGACGGAGATTTACCTCCTGAAGACCAAGGACGGAG
CACTTCACGCATTCCAGTCATTCATACAGTCAATGGTCATTCCCGGCGGC
GTTCGGGTCGAGCGACTAAGGGCGGACAAAGGGGGTGAGTTTATTGGCAA
CGATTTTAGAAGCTACTGCCGGCAGACAGGCGTATTGCTAGAGTTCGCAA
GCACCAACACACCACAACAAATCGGTATGTCAGAACGCGTCGGGAGGACG
CTCGCAGCCATGGTCCGGTGCATGCTTGCCGACAGCGGTTTGCCAACCTT
TCTCTGGGGGGAACTGATGTTCACAGCGGCGTATCTTGCAAACAGAGCAC
CACACTCCGCGCTCGGCATGCAATCTCCTCATAAGATGCTGAAGGGAACG
GAACCGGATCTTCGACACCTTCGAGTTATCGGAGCCAGAGCTTTCGTACA
TATCGAGCGGCACACCCCAAAACTCGCTCTTAAGGCAGTCGAAGGACGGT
TAGTTGGGTACAGTAATCACAGCAAGAGCTACCGGGTCTACAATCCGGCC
ACCCGACGTATCATTGAGAGCAGGAACGTCGTCTTCATCGAGACGCCACC
ACATCTTACGCCAACGGGGGAGCCACAACTTCTGATACACCCGTCTTCAC
CTAGCGACAGTGAGGGCCACAATTACGCCACCGACGACGACTTCTTACGT
GATCTTCGCGATCACACCTCCGTACTAGCTCAACCAGCTCGTGTGTCTGT
CGATCATGCCACTGCCAGCGGGGTCTCTAGCAATCCACAGGTGGCCGAGC
TTCTGGAAAGGATCAGTACCATCACCCGGCGGGATATGCTGCACGACGAT
GCCACACCTCGTGAAGGGACGTCACCAGCATCACCGGAAGGCGGCGAACC
GCCGGAGAAAACTGTGGCTCCTTCACAGGACGGAGCTAGCCAGTCCACGG
AGACATCATCAACCGAACCACCGCTCAACCACCCTCACCACACTCATCAC
CAAGTGACTCCTGCGGTGACACGCGCGGGTGTCGCAGCACGCTCCTTCAG
GGAACGCAACGCCAACAACGACAGCCCAGCTTCCACGCATCTTGCAGCAA
TTGCCAACGACAAAACGCTCTCCGAGCTACGACAACTGGGACTATACACC
AATGCGCTCCTACCGGATGTCGCACATCAAACGTTTGAGGCAGAATCAGT
CGTGGAGTATGCCTACACCACGACCAGC
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