prot_H-paniculata_contig20672.5368.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig20672.5368.1
Unique Nameprot_H-paniculata_contig20672.5368.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length53
Homology
BLAST of mRNA_H-paniculata_contig20672.5368.1 vs. uniprot
Match: Q9SMD6_9PHAE (Carbonic anhydrase alpha type (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q9SMD6_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 5.670e-12
Identity = 29/49 (59.18%), Postives = 39/49 (79.59%), Query Frame = 0
Query:    5 QISQLWSVLNVGKSTSTEDVFVSSPYDMIPSTPTYIHYIGSLTTPPCTE 53
            +I  LW VL++GK T T++VFV+  YD++PS P + HY+GSLTTPPCTE
Sbjct:   41 EIEHLWDVLDIGKPT-TDEVFVTRVYDIMPSNPVFSHYMGSLTTPPCTE 88          
BLAST of mRNA_H-paniculata_contig20672.5368.1 vs. uniprot
Match: F6MHT6_SACJA (Carbonic anhydrase n=1 Tax=Saccharina japonica TaxID=88149 RepID=F6MHT6_SACJA)

HSP 1 Score: 62.0 bits (149), Expect = 5.410e-10
Identity = 27/49 (55.10%), Postives = 39/49 (79.59%), Query Frame = 0
Query:    5 QISQLWSVLNVGKSTSTEDVFVSSPYDMIPSTPTYIHYIGSLTTPPCTE 53
            +I  LW VL++G++T T++VF +  YD++PS P + HY+GSLTTPPCTE
Sbjct:  187 EIEHLWDVLDIGETT-TKEVFTTRIYDIMPSNPVFSHYMGSLTTPPCTE 234          
BLAST of mRNA_H-paniculata_contig20672.5368.1 vs. uniprot
Match: A0A2E1Q2R6_9PROT (Carbonate dehydratase n=1 Tax=Bdellovibrionaceae bacterium TaxID=2026715 RepID=A0A2E1Q2R6_9PROT)

HSP 1 Score: 49.7 bits (117), Expect = 1.490e-5
Identity = 23/48 (47.92%), Postives = 31/48 (64.58%), Query Frame = 0
Query:    6 ISQLWSVLNVGKSTSTEDVFVSSPYDMIPSTPTYIHYIGSLTTPPCTE 53
            +  +W  + + K  S E  F  +P D+IP T TY +YIGSLTTPPC+E
Sbjct:  189 VESVWRNIPIQKGASKEVNFKINPEDLIPRTRTYYNYIGSLTTPPCSE 236          
BLAST of mRNA_H-paniculata_contig20672.5368.1 vs. uniprot
Match: D8LB10_ECTSI (Carbonic anhydrase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB10_ECTSI)

HSP 1 Score: 48.5 bits (114), Expect = 3.930e-5
Identity = 19/49 (38.78%), Postives = 37/49 (75.51%), Query Frame = 0
Query:    5 QISQLWSVLNVGKSTSTEDVFVSSPYDMIPSTPTYIHYIGSLTTPPCTE 53
            ++  +W+V+++ +  + E+ F+++ Y ++P+TP++  Y GSLTTPPCTE
Sbjct:  192 ELEPMWNVMDLNQDIA-EEQFMAAAYSLLPATPSFTTYSGSLTTPPCTE 239          
BLAST of mRNA_H-paniculata_contig20672.5368.1 vs. uniprot
Match: A0A1M5BV72_9RHOB (Carbonic anhydrase n=1 Tax=Loktanella atrilutea TaxID=366533 RepID=A0A1M5BV72_9RHOB)

HSP 1 Score: 47.4 bits (111), Expect = 9.230e-5
Identity = 23/53 (43.40%), Postives = 32/53 (60.38%), Query Frame = 0
Query:    1 PLREQISQLWSVLNVGKSTSTEDVFVSSPYDMIPSTPTYIHYIGSLTTPPCTE 53
            P    I+QLW+V      T+     V S  D++PS  +Y+ ++GSLTTPPCTE
Sbjct:  148 PANPAIAQLWNVAPYDHDTTGSGEAVISIRDLLPSNQSYMRFMGSLTTPPCTE 200          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20672.5368.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
Q9SMD6_9PHAE5.670e-1259.18Carbonic anhydrase alpha type (Fragment) n=1 Tax=L... [more]
F6MHT6_SACJA5.410e-1055.10Carbonic anhydrase n=1 Tax=Saccharina japonica Tax... [more]
A0A2E1Q2R6_9PROT1.490e-547.92Carbonate dehydratase n=1 Tax=Bdellovibrionaceae b... [more]
D8LB10_ECTSI3.930e-538.78Carbonic anhydrase n=2 Tax=Ectocarpus TaxID=2879 R... [more]
A0A1M5BV72_9RHOB9.230e-543.40Carbonic anhydrase n=1 Tax=Loktanella atrilutea Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001148Alpha carbonic anhydrase domainPFAMPF00194Carb_anhydrasecoord: 3..53
e-value: 1.7E-7
score: 31.0
IPR001148Alpha carbonic anhydrase domainPROSITEPS51144ALPHA_CA_2coord: 1..53
score: 14.624
IPR036398Alpha carbonic anhydrase domain superfamilyGENE3D3.10.200.10coord: 1..53
e-value: 1.0E-9
score: 40.4
IPR036398Alpha carbonic anhydrase domain superfamilySUPERFAMILY51069Carbonic anhydrasecoord: 6..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20672contigH-paniculata_contig20672:167..325 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20672.5368.1mRNA_H-paniculata_contig20672.5368.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig20672 167..325 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig20672.5368.1 ID=prot_H-paniculata_contig20672.5368.1|Name=mRNA_H-paniculata_contig20672.5368.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=53bp
PLREQISQLWSVLNVGKSTSTEDVFVSSPYDMIPSTPTYIHYIGSLTTPP
CTE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001148CA_dom
IPR036398CA_dom_sf