prot_H-paniculata_contig20602.5347.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig20602.5347.1
Unique Nameprot_H-paniculata_contig20602.5347.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length114
Homology
BLAST of mRNA_H-paniculata_contig20602.5347.1 vs. uniprot
Match: UPI0007EFEF85 (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007EFEF85)

HSP 1 Score: 67.0 bits (162), Expect = 1.070e-10
Identity = 39/85 (45.88%), Postives = 51/85 (60.00%), Query Frame = 0
Query:   36 PTQQHLVAVKLIFRYLQGHPDVPITYSRCEP-KLLGYSDASYC-----TRSTTGTMFFFANVLVHFSSRPQKITAISTTEAELIA 114
            P + HL+A+K IFRYL+G P++ I Y R     L+G+SDA Y       +STTGT  F  N LV + S+ Q   + ST EAE IA
Sbjct:  210 PRESHLIAIKRIFRYLKGTPNLGIWYPRDSGFDLIGFSDADYAGCRIDRKSTTGTCQFLGNKLVSWFSKKQNSVSTSTAEAEYIA 294          
BLAST of mRNA_H-paniculata_contig20602.5347.1 vs. uniprot
Match: A0A6L2KVV5_TANCI (Putative RNA-directed DNA polymerase n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2KVV5_TANCI)

HSP 1 Score: 65.9 bits (159), Expect = 3.540e-10
Identity = 35/87 (40.23%), Postives = 54/87 (62.07%), Query Frame = 0
Query:   34 DAPTQQHLVAVKLIFRYLQGHPDVPITYSRC-EPKLLGYSDASYC-----TRSTTGTMFFFANVLVHFSSRPQKITAISTTEAELIA 114
            +APT+QH+ A+K +FRY+QG  ++ I Y +     L+ YSD+ Y       RST+G + F +   + +SS+ Q I  +STTEAE +A
Sbjct:  104 EAPTEQHMAAMKKLFRYIQGTKELGIFYKKGGSDYLVAYSDSDYAGVLDNRRSTSGYVCFMSGAAIAWSSKRQPIVTLSTTEAEFVA 190          
BLAST of mRNA_H-paniculata_contig20602.5347.1 vs. uniprot
Match: A0A5N6MJR9_9ASTR (Integrase catalytic domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6MJR9_9ASTR)

HSP 1 Score: 65.5 bits (158), Expect = 4.890e-10
Identity = 40/86 (46.51%), Postives = 50/86 (58.14%), Query Frame = 0
Query:   35 APTQQHLVAVKLIFRYLQGHPDVPITYSRCEP-KLLGYSDASYC-----TRSTTGTMFFFANVLVHFSSRPQKITAISTTEAELIA 114
            AP + HL+AVK IFRYLQG   + I YS     KL+G+SD+ Y       +ST+G   F  N LV + S+ Q   A ST EAE IA
Sbjct:  908 APKESHLIAVKRIFRYLQGTQSLGIWYSTGHSCKLVGFSDSDYAGCKLTRKSTSGGCQFLGNCLVSWQSKKQTSVATSTAEAEYIA 993          
BLAST of mRNA_H-paniculata_contig20602.5347.1 vs. uniprot
Match: A0A392NRS0_9FABA (Putative reverse transcriptase (RNA-dependent DNA polymerase) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392NRS0_9FABA)

HSP 1 Score: 62.4 bits (150), Expect = 5.680e-10
Identity = 35/85 (41.18%), Postives = 52/85 (61.18%), Query Frame = 0
Query:   36 PTQQHLVAVKLIFRYLQGHPDVPITYSRCEP-KLLGYSDASYC-----TRSTTGTMFFFANVLVHFSSRPQKITAISTTEAELIA 114
            P + HL AVK IFRYL+G P++ + Y + +  KL+GY +A Y       +ST+G+     + L+ +SS+ Q   A+ST EAE IA
Sbjct:    6 PREYHLTAVKRIFRYLKGTPNLGLLYKKSDNYKLIGYCNADYAGDKRKRKSTSGSCQLLGDNLISWSSKRQSTIALSTAEAEYIA 90          
BLAST of mRNA_H-paniculata_contig20602.5347.1 vs. uniprot
Match: A0A6L2N0D9_TANCI (Integrase catalytic domain-containing protein n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2N0D9_TANCI)

HSP 1 Score: 65.1 bits (157), Expect = 6.770e-10
Identity = 39/86 (45.35%), Postives = 56/86 (65.12%), Query Frame = 0
Query:   35 APTQQHLVAVKLIFRYLQGHPDVPITYSR-CEPKLLGYSDASYC-----TRSTTGTMFFFANVLVHFSSRPQKITAISTTEAELIA 114
            +PT++HL A+K +FRYL+G  +  + YS+     L+ Y+DA +       RST+G+  F  + LV +SS+ QK TAISTTEAE IA
Sbjct: 2086 SPTKKHLEALKWVFRYLKGTINWGLWYSKDTAMALMAYADADHAGCQDTRRSTSGSAQFLGDKLVSWSSKKQKSTAISTTEAEYIA 2171          
BLAST of mRNA_H-paniculata_contig20602.5347.1 vs. uniprot
Match: A0A6L2JBA5_TANCI (Uncharacterized protein n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2JBA5_TANCI)

HSP 1 Score: 63.2 bits (152), Expect = 8.530e-10
Identity = 36/85 (42.35%), Postives = 51/85 (60.00%), Query Frame = 0
Query:   36 PTQQHLVAVKLIFRYLQGHPDVPITYSRCEP-KLLGYSDASYC-----TRSTTGTMFFFANVLVHFSSRPQKITAISTTEAELIA 114
            P   HL AVK+IFRYL+G P++ + YS+  P  L+ YSD+ Y       +STTG   F  + L+ +  + Q + A S+TEAE IA
Sbjct:   51 PKVSHLHAVKMIFRYLKGKPNLGLWYSKDSPFDLVAYSDSDYAGASLDRKSTTGGCQFLGSRLISWQCKKQTVVATSSTEAEYIA 135          
BLAST of mRNA_H-paniculata_contig20602.5347.1 vs. uniprot
Match: A0A5N6P187_9ASTR (Integrase catalytic domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6P187_9ASTR)

HSP 1 Score: 64.7 bits (156), Expect = 8.940e-10
Identity = 40/86 (46.51%), Postives = 50/86 (58.14%), Query Frame = 0
Query:   35 APTQQHLVAVKLIFRYLQGHPDVPITYS-RCEPKLLGYSDASYC-----TRSTTGTMFFFANVLVHFSSRPQKITAISTTEAELIA 114
            AP + HL+AVK IFRYLQG   + I YS R   KL+ +SD+ Y       +ST+G   F  N LV + S+ Q   A ST EAE IA
Sbjct:  841 APKESHLIAVKRIFRYLQGTQSLGIWYSTRHSYKLVAFSDSDYAGCKLTRKSTSGGCQFLGNCLVSWQSKKQTSVATSTAEAEYIA 926          
BLAST of mRNA_H-paniculata_contig20602.5347.1 vs. uniprot
Match: UPI001AD8C6C3 (secreted RxLR effector protein 161-like n=1 Tax=Rosa chinensis TaxID=74649 RepID=UPI001AD8C6C3)

HSP 1 Score: 62.4 bits (150), Expect = 9.050e-10
Identity = 32/87 (36.78%), Postives = 54/87 (62.07%), Query Frame = 0
Query:   34 DAPTQQHLVAVKLIFRYLQGHPDVPITYSRCE-PKLLGYSDASYCT-----RSTTGTMFFFANVLVHFSSRPQKITAISTTEAELIA 114
            + PT+ HL+AVK I RYL+G  D  I Y + + P L G++ + Y +     +ST+G +F   +  + +S++ Q++  +STTEAE +A
Sbjct:   60 EKPTEDHLLAVKRILRYLKGTVDFGIFYKKLQSPSLCGFTYSDYASYMDDRKSTSGFVFMMGSGAISWSTKKQQVVTLSTTEAEFVA 146          
BLAST of mRNA_H-paniculata_contig20602.5347.1 vs. uniprot
Match: A0A6L2NML7_TANCI (Copia protein n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2NML7_TANCI)

HSP 1 Score: 64.3 bits (155), Expect = 1.180e-9
Identity = 38/85 (44.71%), Postives = 55/85 (64.71%), Query Frame = 0
Query:   36 PTQQHLVAVKLIFRYLQGHPDVPITYSRCEPKLL-GYSDASYC-----TRSTTGTMFFFANVLVHFSSRPQKITAISTTEAELIA 114
            PT++HL A+K IF+YL+G  ++ + YS+    LL  Y+DA +       RST G+  F  + LV +SS+ QK TA+S+TEAE IA
Sbjct:  489 PTEKHLQAMKRIFQYLKGTINIGLWYSKDTDMLLTAYADADHAGCQDTRRSTLGSAHFVGDKLVSWSSKKQKSTAVSSTEAEYIA 573          
BLAST of mRNA_H-paniculata_contig20602.5347.1 vs. uniprot
Match: A0A699MXQ0_TANCI (Uncharacterized mitochondrial protein AtMg00810-like (Fragment) n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699MXQ0_TANCI)

HSP 1 Score: 61.6 bits (148), Expect = 1.370e-9
Identity = 39/85 (45.88%), Postives = 51/85 (60.00%), Query Frame = 0
Query:   36 PTQQHLVAVKLIFRYLQGHPDVPITYSR-CEPKLLGYSDASYC-----TRSTTGTMFFFANVLVHFSSRPQKITAISTTEAELIA 114
            PT+ HL A+K +FRYL+G  +  + Y +     L  Y+DA         RST+G   FF + LV +SS+ QK TAISTTEAE IA
Sbjct:   64 PTKNHLEALKWVFRYLRGTINWGLWYPKDTSMALTAYADADRAGCQDTRRSTSGNAQFFKDKLVSWSSKKQKSTAISTTEAEYIA 148          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20602.5347.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0007EFEF851.070e-1045.88uncharacterized mitochondrial protein AtMg00810-li... [more]
A0A6L2KVV5_TANCI3.540e-1040.23Putative RNA-directed DNA polymerase n=1 Tax=Tanac... [more]
A0A5N6MJR9_9ASTR4.890e-1046.51Integrase catalytic domain-containing protein n=1 ... [more]
A0A392NRS0_9FABA5.680e-1041.18Putative reverse transcriptase (RNA-dependent DNA ... [more]
A0A6L2N0D9_TANCI6.770e-1045.35Integrase catalytic domain-containing protein n=1 ... [more]
A0A6L2JBA5_TANCI8.530e-1042.35Uncharacterized protein n=1 Tax=Tanacetum cinerari... [more]
A0A5N6P187_9ASTR8.940e-1046.51Integrase catalytic domain-containing protein n=1 ... [more]
UPI001AD8C6C39.050e-1036.78secreted RxLR effector protein 161-like n=1 Tax=Ro... [more]
A0A6L2NML7_TANCI1.180e-944.71Copia protein n=1 Tax=Tanacetum cinerariifolium Ta... [more]
A0A699MXQ0_TANCI1.370e-945.88Uncharacterized mitochondrial protein AtMg00810-li... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 34..114
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 34..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20602contigH-paniculata_contig20602:561..995 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20602.5347.1mRNA_H-paniculata_contig20602.5347.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig20602 561..1772 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig20602.5347.1 ID=prot_H-paniculata_contig20602.5347.1|Name=mRNA_H-paniculata_contig20602.5347.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=114bp
MSSANPTKTPGVKTDSTTTTSEDSQLLDAAATKDAPTQQHLVAVKLIFRY
LQGHPDVPITYSRCEPKLLGYSDASYCTRSTTGTMFFFANVLVHFSSRPQ
KITAISTTEAELIA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like