mRNA_H-paniculata_contig20602.5347.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig20602.5347.1
Unique NamemRNA_H-paniculata_contig20602.5347.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig20602.5347.1 vs. uniprot
Match: A0A2Z6P4F1_TRISU (CCHC-type domain-containing protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6P4F1_TRISU)

HSP 1 Score: 85.9 bits (211), Expect = 1.650e-15
Identity = 63/191 (32.98%), Postives = 94/191 (49.21%), Query Frame = 3
Query:  171 KARLVVQGWSQKHWVDYGSTFAPVCRLENQRLLLARATAKDWTVLRNKQTGTPQLSQHKYVPSVLDRFNMSSANPTKTPGVKTDSTTTTSEDSQLLDAAATK--DAPTQQHLVAVKLIFRYLQGHPDVPITYSRCEP-KLLGYSDASYC-----TRSTTGTMFFFANVLVHFSSRPQKITAISTTEAELIA 719
            K RLV QG++Q+  +DY  TFAP+  +    ++          +   +Q     +SQ KYV  +L ++ M+ A    TP      +T+  +D +  D +  +   +P + HL+AVK IFRYL G PDV + Y +     L  Y DA Y       + T+G   F    LV +  R Q   A+STTEAE +A
Sbjct:  582 KGRLVAQGYNQQEGIDYDETFAPIASVFEMSMMGELGFFLGLQI--KQQEDGIFISQEKYVNDLLKKYKMNEAKIMSTP---MHPSTSLDKDEKGKDVSEKEFQTSPKESHLIAVKRIFRYLVGTPDVGLWYKKGSHFDLQAYCDADYAGDKVERKRTSGACQFLGEALVSWCCRKQNTIALSTTEAEYVA 767          
BLAST of mRNA_H-paniculata_contig20602.5347.1 vs. uniprot
Match: A0A6H5KBU1_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU1_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 2.120e-15
Identity = 73/220 (33.18%), Postives = 99/220 (45.00%), Query Frame = 3
Query:  150 SKSEGKFKARL--VVQGWSQKHWVDYGSTFAPVCRLENQRLLLARATAKDWTVLRN-----------KQTGTPQLSQHKYVPSVLDRFNMSSANPTKTPGVKTDSTTTTSEDSQLLDA------------AATKDAPTQQHLVAVKLIFRYLQGHPDVPITYSRCEPKLLGYSDASYCT-----RSTTGTMFFFANVLVHFSSRPQKITAISTTEAELIA 719
            S SEG+  A L  V   W+Q    D+G TFAPVCRL++ R+LLA A  KD  V++            ++ G    SQ  Y  S+LDRF M S  P  T G   + +        L               A     P++ H+ A K + RYL G  D  ITY R    L   SDA++       +S +  +   +   V F    Q +TA+ST EAEL+A
Sbjct:  368 SSSEGEQSAPLPSVTGRWNQVPGRDWGGTFAPVCRLQSIRMLLAIAAEKDLDVIQLDVKTAFLYADIEEDGELTNSQENYPNSILDRFGMGSWKPLSTAGFGPELSAIIGSVIYLAQITRYDIMYCASQLARAMSNPSKIHMGAAKHLLRYLSGSRDFSITYKRGGFDLTALSDANWGNNPDNRKSMSSYIMMMSKAPVSFKFGLQSLTAMSTLEAELVA 587          
BLAST of mRNA_H-paniculata_contig20602.5347.1 vs. uniprot
Match: A0A6L2LN47_TANCI (Integrase, catalytic region, zinc finger, CCHC-type, peptidase aspartic, catalytic n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2LN47_TANCI)

HSP 1 Score: 84.3 bits (207), Expect = 5.590e-15
Identity = 66/194 (34.02%), Postives = 106/194 (54.64%), Query Frame = 3
Query:  165 KFKARLVVQGWSQKHWVDYGSTFAPVCRLENQRLLLARATAKDWTVLRNKQTGT---PQLSQHKYVPSVLDRFNMSSANPTKTPGVKTDSTTTTSEDSQLLDAAATKDAPTQQHLVAVKLIFRYLQGHPDVPITYSRCEPKL-LGYSDASYC-----TRSTTGTMFFFANVLVHFSSRPQKITAISTTEAELIA 719
            + +ARLV +G+ Q+  +D+  +FAPV R+E  R+ +  A +K+ T+ +     T    +L Q  YV S L+ F +++ +PT    +K           +L   A  + +PT++HL A+K + RYL+G  +  + YS+        Y+DA +       RST+G+  F  + LV +SS+ QK T ISTTEAE IA
Sbjct: 1171 RLQARLVAKGYRQEEGIDFEESFAPVARIEAIRIFITNAASKNMTIYQMDVKTTFLNDELKQEVYV-SQLEGF-VNTDHPTHVYCIKK-----ALYGLKLAPRAWYQTSPTKKHLEALKRVCRYLRGTINWGLWYSKDTAMTPTAYADADHAGCQDTQRSTSGSAQFLGDKLVSWSSKKQKSTTISTTEAEYIA 1357          
BLAST of mRNA_H-paniculata_contig20602.5347.1 vs. uniprot
Match: A0A2Z6P6S4_TRISU (CCHC-type domain-containing protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6P6S4_TRISU)

HSP 1 Score: 81.3 bits (199), Expect = 6.290e-14
Identity = 67/218 (30.73%), Postives = 99/218 (45.41%), Query Frame = 3
Query:  171 KARLVVQGWSQKHWVDYGSTFAPVCRLENQRLLLARATAKDWTVLRNKQTGTPQLSQHKYVPSVLDRFNMSSANPTKTPGVKTDSTTTTSEDSQLLDA-----------------------------AATKDAPTQQHLVAVKLIFRYLQGHPDVPITYSRCEP-KLLGYSDASYC-----TRSTTGTMFFFANVLVHFSSRPQKITAISTTEAELIA 719
            KARLV QG++Q+  +DY  TF+PV              A+ +  ++ ++ G   +SQ KYV  +L ++NM+ A    TP      +T+  +D +  D                              A  + +P + HL+AVK IFRYL G PDV + Y +     L  Y DA Y       ++T+G   F    LV +  R Q   A+STTEAE +A
Sbjct:  597 KARLVAQGYNQQEEIDYDETFSPV--------------ARKFMCIKQQEDGI-FISQEKYVNDLLKKYNMNEAKIMSTP---MHPSTSLDKDEKGKDVSKKEYRGMIGSLLYLIASRPDIVFAVGLCARFQTSPKESHLIAVKRIFRYLVGTPDVGLWYQKGSHFDLQAYCDADYTGDKIERKNTSGACQFLGEALVSWCCRKQNTIALSTTEAEYVA 796          
BLAST of mRNA_H-paniculata_contig20602.5347.1 vs. uniprot
Match: A0A6L2K2A2_TANCI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2K2A2_TANCI)

HSP 1 Score: 80.9 bits (198), Expect = 8.180e-14
Identity = 68/194 (35.05%), Postives = 109/194 (56.19%), Query Frame = 3
Query:  165 KFKARLVVQGWSQKHWVDYGSTFAPVCRLENQRLLLARATAKDWTVLR-NKQTG--TPQLSQHKYVPSVLDRFNMSSANPTKTPGVKTDSTTTTSEDSQLLDAAATKDAPTQQHLVAVKLIFRYLQGHPDVPITYSR-CEPKLLGYSDASYC-----TRSTTGTMFFFANVLVHFSSRPQKITAISTTEAELIA 719
            K KARLV +G+ Q+  +D+  +FAPV R+E  R+ +A AT+K+ T+ + + +T     +L +  YV S  + F +   +PT    +K       +  S +        +PT+++L A+K +FRYL+G  +  + YS+    +L  Y+DA +       RST+ +  F  + LV +SS+ QK TAISTTEAE IA
Sbjct:  815 KNKARLVAKGYRQEEGIDFEKSFAPVTRIEAIRIFIANATSKNMTIYQMDVKTAFLNDELKEEVYV-SQPEGF-VDPDHPTHVYRLKKALYXVKTGPSGMA-------SPTKKYLEALKQVFRYLKGTINGGLWYSKDIAIELTTYADADHAGCQDTRRSTSRSAQFLGDKLVSWSSKKQKSTAISTTEAEYIA 999          
BLAST of mRNA_H-paniculata_contig20602.5347.1 vs. uniprot
Match: A0A2Z6NHP6_TRISU (CCHC-type domain-containing protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6NHP6_TRISU)

HSP 1 Score: 80.5 bits (197), Expect = 1.140e-13
Identity = 68/218 (31.19%), Postives = 100/218 (45.87%), Query Frame = 3
Query:  171 KARLVVQGWSQKHWVDYGSTFAPVCRLENQRLLLARATAKDWTVLRNKQTGTPQLSQHKYVPSVLDRFNMSSANPTKTPGVKTDSTTTTSEDSQLLDA-----------------------------AATKDAPTQQHLVAVKLIFRYLQGHPDVPITYSRCEP-KLLGYSDASYC-----TRSTTGTMFFFANVLVHFSSRPQKITAISTTEAELIA 719
            KARLV QG++Q+  +DY  TFAPV   E +  ++          ++ ++ G   +SQ KYV  +L ++ M+ A    TP      +T+  +D +  D                              A  + +P + HL+AVK IFRYL G+PDV + Y +     L  Y DA Y       +ST+G   F    LV +  R Q   A+STTEAE +A
Sbjct:  379 KARLVAQGYNQQEGIDYDETFAPVDS-EFEMSMMGELGFFLGLQIKQQEDGI-FISQEKYVNDLLKKYKMNEAKIMSTP---MHPSTSLDKDEKGKDVSEKEYRGMIGSLLYLTASRPDIVFAVGLCARFQTSPKESHLIAVKRIFRYLVGNPDVGLWYKKGSHFDLQAYCDADYAGDKIERKSTSGACQFLGEALVSWCCRKQNTIALSTTEAEYVA 591          
BLAST of mRNA_H-paniculata_contig20602.5347.1 vs. uniprot
Match: A0A2Z6NRJ1_TRISU (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6NRJ1_TRISU)

HSP 1 Score: 79.7 bits (195), Expect = 2.050e-13
Identity = 70/219 (31.96%), Postives = 98/219 (44.75%), Query Frame = 3
Query:  171 KARLVVQGWSQKHWVDYGSTFAPVCRLENQRLLLARATAKDWTVLRNKQTGTPQ-LSQHKYVPSVLDRFNMSSANPTKTPGVKTDSTTTTSEDSQLLDA-----------------------------AATKDAPTQQHLVAVKLIFRYLQGHPDVPITYSRCEP-KLLGYSDASYC-----TRSTTGTMFFFANVLVHFSSRPQKITAISTTEAELIA 719
            KARLV QG++Q+  +DY  TFAPV       ++        +  L+ KQ      +SQ KYV  +L ++ MS A    TP      +T+  +D +  D                              A  + +P + HL+AVK IFRYL G PDV + Y +     L  Y DA Y       +ST+G   F    LV++  R Q   A+STTEAE +A
Sbjct:  146 KARLVAQGYNQQEGIDYDETFAPVASEFEMSMM---GELGFFLGLQIKQLEDEIFISQEKYVNDLLKKYKMSEAKIMSTP---MHPSTSLDKDEKGKDVSEKEYRGMIGSLLYLTASRPDIVFTVGLCARFQTSPKESHLIAVKRIFRYLVGTPDVGLWYKKGSHFDLQAYCDADYAGDKIERKSTSGACQFLGEALVNWCCRKQNTIALSTTEAEYVA 358          
BLAST of mRNA_H-paniculata_contig20602.5347.1 vs. uniprot
Match: A0A2Z6LY43_TRISU (Uncharacterized protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6LY43_TRISU)

HSP 1 Score: 79.7 bits (195), Expect = 2.080e-13
Identity = 65/215 (30.23%), Postives = 97/215 (45.12%), Query Frame = 3
Query:  171 KARLVVQGWSQKHWVDYGSTFAPVCRLENQRLLLARATAKDWTVLRNKQTGTPQLSQHKYVPSVLDRFNMSSANPTKTPGVKTDSTTTTSEDSQLLD--------------------------AAATKDAPTQQHLVAVKLIFRYLQGHPDVPITYSRCEP-KLLGYSDASYC-----TRSTTGTMFFFANVLVHFSSRPQKITAISTTEAELIA 719
            KARLV QG++Q+  +DY  TFAPV   E +  ++   +      ++ ++ G   +SQ KYV  +L ++ M+ +    TP   + S     +   + +                           A  + +P + HL AVK IFRYL G PDV + Y +     L  Y DA Y       +ST+G   F    LV +  R Q   A+STTEAE +A
Sbjct:  295 KARLVAQGYNQQEGIDYDETFAPVAS-EFEMSMMGELSFFLGLQIKQQEDGI-FISQEKYVNDLLKKYKMNESKIMSTPMHPSTSLDKDEKGKDVFEKEYRGMIGSLLYLTASRPHIVFVVSLCARFQTSPKESHLTAVKRIFRYLVGTPDVGLWYKKGSHFDLQAYCDADYAGDKIERKSTSGACQFLGEALVSWCFRKQNTIALSTTEAEYVA 507          
BLAST of mRNA_H-paniculata_contig20602.5347.1 vs. uniprot
Match: A0A2Z6NQI0_TRISU (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6NQI0_TRISU)

HSP 1 Score: 77.4 bits (189), Expect = 1.210e-12
Identity = 65/218 (29.82%), Postives = 99/218 (45.41%), Query Frame = 3
Query:  171 KARLVVQGWSQKHWVDYGSTFAPVCRLENQRLLLARATAKDWTVLRNKQTGTPQLSQHKYVPSVLDRFNMSSANPTKTPGVKTDSTTTTSEDSQLLDAAATKD-----------------------------APTQQHLVAVKLIFRYLQGHPDVPITYSRCEP-KLLGYSDASYC-----TRSTTGTMFFFANVLVHFSSRPQKITAISTTEAELIA 719
            KARLV QG++Q+  +DY  TF PV   E +  ++          ++ ++ G   +SQ KYV  +L ++ M+ +    TP     ++T+  +D +  D +  ++                             +P + HL AVK IFRYL G PDV + Y +     L  Y DA Y       +ST+G   F    LV +  R Q   A+STTEAE +A
Sbjct:  384 KARLVAQGYNQQEGIDYDETFVPVAS-EFEMSMMGELGFFLGLQIKQQEDGI-FISQEKYVNDLLKKYKMNESKIMSTP---MHASTSLDKDEKGKDVSEKENRGMIGSLLYLTASRPDIVFAVGLCARFQTSPKESHLTAVKRIFRYLVGTPDVGLWYKKGSHFDLQAYCDADYAGDKVERKSTSGACQFLGEALVSWCCRKQNTIALSTTEAEYVA 596          
BLAST of mRNA_H-paniculata_contig20602.5347.1 vs. uniprot
Match: A0A2Z6NAY6_TRISU (Uncharacterized protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6NAY6_TRISU)

HSP 1 Score: 77.4 bits (189), Expect = 1.310e-12
Identity = 67/218 (30.73%), Postives = 98/218 (44.95%), Query Frame = 3
Query:  171 KARLVVQGWSQKHWVDYGSTFAPVCRLENQRLLLARATAKDWTVLRNKQTGTPQLSQHKYVPSVLDRFNMSSANPTKTPGVKTDSTTTTSEDSQLLDA-----------------------------AATKDAPTQQHLVAVKLIFRYLQGHPDVPITYSRCEP-KLLGYSDASYC-----TRSTTGTMFFFANVLVHFSSRPQKITAISTTEAELIA 719
            KARLV QG++Q+  +DY  TF PV   E +  ++          ++ ++ G   +SQ KYV  +L ++ M+ A    TP      +T+  +D +  D                              A  + +P + HL+AVK IFRYL G PDV + Y +     L  Y DA Y       +ST+G   F    LV +  R Q   A+STTEAE +A
Sbjct:  553 KARLVAQGYNQQEGIDYDKTFDPVAS-EFEMSMMGEHGFFLGLKIKQQEDGI-FISQEKYVNDLLKKYKMNEAKIMSTP---MHPSTSLDKDEKGKDVSEKEYRGMIGSLLYLTASRPDIVFAVGLCARFQTSPKESHLIAVKRIFRYLVGTPDVGLWYKKGSHFDLQAYCDADYLGDKIERKSTSGACQFLGEALVSWCCRKQNTIALSTTEAEYVA 765          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20602.5347.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2Z6P4F1_TRISU1.650e-1532.98CCHC-type domain-containing protein n=1 Tax=Trifol... [more]
A0A6H5KBU1_9PHAE2.120e-1533.18CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6L2LN47_TANCI5.590e-1534.02Integrase, catalytic region, zinc finger, CCHC-typ... [more]
A0A2Z6P6S4_TRISU6.290e-1430.73CCHC-type domain-containing protein n=1 Tax=Trifol... [more]
A0A6L2K2A2_TANCI8.180e-1435.05Retrovirus-related Pol polyprotein from transposon... [more]
A0A2Z6NHP6_TRISU1.140e-1331.19CCHC-type domain-containing protein n=1 Tax=Trifol... [more]
A0A2Z6NRJ1_TRISU2.050e-1331.96Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2Z6LY43_TRISU2.080e-1330.23Uncharacterized protein n=1 Tax=Trifolium subterra... [more]
A0A2Z6NQI0_TRISU1.210e-1229.82Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2Z6NAY6_TRISU1.310e-1230.73Uncharacterized protein n=1 Tax=Trifolium subterra... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20602contigH-paniculata_contig20602:561..1772 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score65.1
Seed ortholog evalue2.5e-08
Seed eggNOG ortholog4558.Sb08g008672.1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs37THH@33090,3GG2K@35493,3IKX9@38820,3M2IR@4447,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPoales
Best eggNOG OGNA|NA|NA
Exons3
Model size719
Cds size342
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20602.5347.1prot_H-paniculata_contig20602.5347.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig20602 561..995 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929537.5218093-CDS-H-paniculata_contig20602:560..8011622929537.5218093-CDS-H-paniculata_contig20602:560..801Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20602 561..801 -
1691480903.7825036-CDS-H-paniculata_contig20602:560..8011691480903.7825036-CDS-H-paniculata_contig20602:560..801Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20602 561..801 -
1622929537.532865-CDS-H-paniculata_contig20602:894..9951622929537.532865-CDS-H-paniculata_contig20602:894..995Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20602 895..995 -
1691480903.8007252-CDS-H-paniculata_contig20602:894..9951691480903.8007252-CDS-H-paniculata_contig20602:894..995Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20602 895..995 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929537.5447786-UTR-H-paniculata_contig20602:995..10731622929537.5447786-UTR-H-paniculata_contig20602:995..1073Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig20602 996..1073 -
1691480903.8096008-UTR-H-paniculata_contig20602:995..10731691480903.8096008-UTR-H-paniculata_contig20602:995..1073Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig20602 996..1073 -
1622929537.555921-UTR-H-paniculata_contig20602:1473..17721622929537.555921-UTR-H-paniculata_contig20602:1473..1772Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig20602 1474..1772 -
1691480903.8182092-UTR-H-paniculata_contig20602:1473..17721691480903.8182092-UTR-H-paniculata_contig20602:1473..1772Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig20602 1474..1772 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig20602.5347.1

>prot_H-paniculata_contig20602.5347.1 ID=prot_H-paniculata_contig20602.5347.1|Name=mRNA_H-paniculata_contig20602.5347.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=114bp
MSSANPTKTPGVKTDSTTTTSEDSQLLDAAATKDAPTQQHLVAVKLIFRY
LQGHPDVPITYSRCEPKLLGYSDASYCTRSTTGTMFFFANVLVHFSSRPQ
KITAISTTEAELIA
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mRNA from alignment at H-paniculata_contig20602:561..1772-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig20602.5347.1 ID=mRNA_H-paniculata_contig20602.5347.1|Name=mRNA_H-paniculata_contig20602.5347.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1212bp|location=Sequence derived from alignment at H-paniculata_contig20602:561..1772- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAAGCTATTAACTCACCGTATGCGGACAAGTGGATGGAAGCCATCCGGAA GGAACTCAACAGCTTCGACGAACATCAAGTCGCCGATTTAATCCCAGCTA GCTCCATCCCATCCGACCACACAGTTATTGGCACGCGCTGGGTATTTAAA GTAAATCAGAGGGAAAATTCAAGGCTCGGCTCGTGGTACAAGGCTGGTCG CAAAAACATTGGGTTGACTACGGGAGTACCTTTGCACCTGTATGCAGACT GGAGAACCAGCGACTATTGCTAGCACGAGCGACGGCAAAGGATTGGACCG TATTTGCACTAGATGTTCAAGTTGCTTTTCTAAACGGCAAGCTGAAGGAG AGCGTCTTCTTCAAACAAACACCTGATTTTGAGAAGACTCACCCTAGTAC TGGACAACCCTACGTGATGAGTTTGAAGAAATCGATATATGGGTTGCGCC AAAGCCCAAATGTGTGGAATCATACAATCGACAACGAGCTGAGGAGCATG GGTTTTACACCAACTGTCACAGACCGCTGTGTCTACAGTGAAGGAAGCAA CGACACCTACATTATGCTTAAGTCTTTTCGTCGACGATATACTAGTGACG GGACCAACGGACAGGCTGCTAATGGACGTGCGCAACAAGTTGATGAATTA ATTTACTATCACGGACCTTGGAGAAGCATCGCTTATACTTGGGATGGAGG TACTACGCAACAAACAGACCGGCACTCCACAGCTATCACAGCACAAGTAT GTACCATCTGTTTTGGACCGGTTCAACATGTCATCAGCGAATCCCACGAA AACACCTGGAGTTAAAACGGACTCCACTACTACTACTAGCGAAGACAGTC AACTACTGGATGCAGCAGCTACAAAGGAGTATCAAGCCATAGTAGGGAGC CTCATCTTCTTGACCCAGTGTACAAGATTCGACATCTGCTTCAGCGTCAT CCAAGCGGCACGCTACATGAGCGCACCAACTCAGCAGCATCTAGTCGCAG TAAAGCTGATTTTTCGGTATTTACAGGGTCACCCAGATGTTCCCATCACG TACAGCAGATGTGAGCCGAAACTACTCGGCTATTCTGATGCATCATACTG CACACGGTCTACAACAGGCACTATGTTCTTCTTTGCCAACGTATTGGTAC ACTTCTCATCTCGACCACAGAAGATAACGGCTATAAGCACAACTGAGGCA GAACTCATCGCA
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Coding sequence (CDS) from alignment at H-paniculata_contig20602:561..1772-

>mRNA_H-paniculata_contig20602.5347.1 ID=mRNA_H-paniculata_contig20602.5347.1|Name=mRNA_H-paniculata_contig20602.5347.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=684bp|location=Sequence derived from alignment at H-paniculata_contig20602:561..1772- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCATCAGCGAATCCCACGAAAACACCTGGAGTTAAAACGGACTCCAC
TACTACTACTAGCGAAGACAGTCAACTACTGGATGCAGCAGCTACAAAGG
AATGTCATCAGCGAATCCCACGAAAACACCTGGAGTTAAAACGGACTCCA
CTACTACTACTAGCGAAGACAGTCAACTACTGGATGCAGCAGCTACAAAG
GACGCACCAACTCAGCAGCATCTAGTCGCAGTAAAGCTGATTTTTCGGTA
TTTACAGGGTCACCCAGATGTTCCCATCACGTACAGCAGATGTGAGCCGA
AACTACTCGGCTATTCTGATGCATCATACTGCACACGGTCTACAACAGGC
ACTATGTTCTTCTTTGCCAACGTATTGGTACACTTCTCATCTCGACCACA
GAAGATAACGGCTATAAGCACAACTGAGGCAGAACTCATCGCACGCACCA
ACTCAGCAGCATCTAGTCGCAGTAAAGCTGATTTTTCGGTATTTACAGGG
TCACCCAGATGTTCCCATCACGTACAGCAGATGTGAGCCGAAACTACTCG
GCTATTCTGATGCATCATACTGCACACGGTCTACAACAGGCACTATGTTC
TTCTTTGCCAACGTATTGGTACACTTCTCATCTCGACCACAGAAGATAAC
GGCTATAAGCACAACTGAGGCAGAACTCATCGCA
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