prot_H-paniculata_contig20588.5338.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig20588.5338.1 vs. uniprot
Match: A0A182GIT5_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GIT5_AEDAL) HSP 1 Score: 61.6 bits (148), Expect = 1.060e-9 Identity = 32/54 (59.26%), Postives = 39/54 (72.22%), Query Frame = 0
Query: 1 MEEEWRALVKNGTWENEDSGRLPAGRKATRTKWIFKRKLKEDGSTARYKARLLA 54
M++E +L +NGTW+ D LP GRKA KWIFKRKL EDG+ RYKARL+A
Sbjct: 13 MDDEMTSLRENGTWQLTD---LPPGRKAVGCKWIFKRKLDEDGNVVRYKARLVA 63
BLAST of mRNA_H-paniculata_contig20588.5338.1 vs. uniprot
Match: A0A5E4G9T3_PRUDU (PREDICTED: Retrovirus-related Pol poly from transposon (Fragment) n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A5E4G9T3_PRUDU) HSP 1 Score: 56.2 bits (134), Expect = 3.810e-9 Identity = 32/54 (59.26%), Postives = 36/54 (66.67%), Query Frame = 0
Query: 1 MEEEWRALVKNGTWENEDSGRLPAGRKATRTKWIFKRKLKEDGSTARYKARLLA 54
M EE RAL KNGTWE LP G+K +WI+ KLKEDGS RYKARL+A
Sbjct: 23 MNEEMRALQKNGTWELVP---LPHGKKTMGCRWIYIVKLKEDGSIERYKARLVA 73
BLAST of mRNA_H-paniculata_contig20588.5338.1 vs. uniprot
Match: A0A438IEM7_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438IEM7_VITVI) HSP 1 Score: 58.5 bits (140), Expect = 1.300e-8 Identity = 32/54 (59.26%), Postives = 37/54 (68.52%), Query Frame = 0
Query: 1 MEEEWRALVKNGTWENEDSGRLPAGRKATRTKWIFKRKLKEDGSTARYKARLLA 54
++EE RAL KNGTWE D LP G+K R KWIF K K DG+ RYKARL+A
Sbjct: 920 VDEEVRALEKNGTWEITD---LPRGKKPVRCKWIFTVKYKADGNVDRYKARLVA 970
BLAST of mRNA_H-paniculata_contig20588.5338.1 vs. uniprot
Match: A5AZT5_VITVI (Integrase catalytic domain-containing protein n=2 Tax=Vitis vinifera TaxID=29760 RepID=A5AZT5_VITVI) HSP 1 Score: 58.2 bits (139), Expect = 1.780e-8 Identity = 32/54 (59.26%), Postives = 37/54 (68.52%), Query Frame = 0
Query: 1 MEEEWRALVKNGTWENEDSGRLPAGRKATRTKWIFKRKLKEDGSTARYKARLLA 54
++EE RAL KNGTWE D LP G+K R KWIF K K DG+ RYKARL+A
Sbjct: 942 VDEEVRALEKNGTWEITD---LPRGKKPIRCKWIFTIKYKADGNVDRYKARLVA 992
BLAST of mRNA_H-paniculata_contig20588.5338.1 vs. uniprot
Match: A0A438GMJ8_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GMJ8_VITVI) HSP 1 Score: 56.2 bits (134), Expect = 8.520e-8 Identity = 31/54 (57.41%), Postives = 36/54 (66.67%), Query Frame = 0
Query: 1 MEEEWRALVKNGTWENEDSGRLPAGRKATRTKWIFKRKLKEDGSTARYKARLLA 54
++EE RAL KNGTWE D LP G+K KWIF K K DG+ RYKARL+A
Sbjct: 646 IDEEVRALEKNGTWEITD---LPRGKKPVGCKWIFTVKYKSDGNVDRYKARLVA 696
BLAST of mRNA_H-paniculata_contig20588.5338.1 vs. uniprot
Match: A0A438JCU9_VITVI (Putative mitochondrial protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JCU9_VITVI) HSP 1 Score: 55.8 bits (133), Expect = 8.970e-8 Identity = 31/54 (57.41%), Postives = 36/54 (66.67%), Query Frame = 0
Query: 1 MEEEWRALVKNGTWENEDSGRLPAGRKATRTKWIFKRKLKEDGSTARYKARLLA 54
++EE RAL KNGTWE D LP G+K KWIF K K DG+ RYKARL+A
Sbjct: 169 VDEEVRALEKNGTWEITD---LPRGKKPVGCKWIFTVKYKADGNVDRYKARLVA 219
BLAST of mRNA_H-paniculata_contig20588.5338.1 vs. uniprot
Match: A0A7C9CYH4_OPUST (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9CYH4_OPUST) HSP 1 Score: 53.9 bits (128), Expect = 1.090e-7 Identity = 31/53 (58.49%), Postives = 35/53 (66.04%), Query Frame = 0
Query: 1 MEEEWRALVKNGTWENEDSGRLPAGRKATRTKWIFKRKLKEDGSTARYKARLL 53
ME E AL N TW D LPAG+KA +KW+FK KLK DGS RYKARL+
Sbjct: 47 MEAEIDALRLNQTWTEVD---LPAGKKAISSKWVFKIKLKADGSLERYKARLV 96
BLAST of mRNA_H-paniculata_contig20588.5338.1 vs. uniprot
Match: A0A438C7W4_VITVI (Retrovirus-related Pol polyprotein from transposon RE2 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438C7W4_VITVI) HSP 1 Score: 55.8 bits (133), Expect = 1.160e-7 Identity = 31/54 (57.41%), Postives = 36/54 (66.67%), Query Frame = 0
Query: 1 MEEEWRALVKNGTWENEDSGRLPAGRKATRTKWIFKRKLKEDGSTARYKARLLA 54
++EE RAL KNGTWE D LP G+K KWIF K K DG+ RYKARL+A
Sbjct: 48 VDEEVRALEKNGTWEITD---LPRGKKPVGCKWIFTVKYKADGNVDRYKARLVA 98
BLAST of mRNA_H-paniculata_contig20588.5338.1 vs. uniprot
Match: A0A438CK78_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CK78_VITVI) HSP 1 Score: 55.8 bits (133), Expect = 1.160e-7 Identity = 31/54 (57.41%), Postives = 36/54 (66.67%), Query Frame = 0
Query: 1 MEEEWRALVKNGTWENEDSGRLPAGRKATRTKWIFKRKLKEDGSTARYKARLLA 54
++EE RAL KNGTWE D LP G+K KWIF K K DG+ RYKARL+A
Sbjct: 365 VDEEVRALEKNGTWEITD---LPRGKKPVGCKWIFTVKYKADGNVDRYKARLVA 415
BLAST of mRNA_H-paniculata_contig20588.5338.1 vs. uniprot
Match: A0A438F8D9_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438F8D9_VITVI) HSP 1 Score: 55.8 bits (133), Expect = 1.160e-7 Identity = 31/54 (57.41%), Postives = 36/54 (66.67%), Query Frame = 0
Query: 1 MEEEWRALVKNGTWENEDSGRLPAGRKATRTKWIFKRKLKEDGSTARYKARLLA 54
++EE RAL KNGTWE D LP G+K KWIF K K DG+ RYKARL+A
Sbjct: 169 VDEEVRALEKNGTWEITD---LPRGKKPVGCKWIFTVKYKADGNVDRYKARLVA 219 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20588.5338.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig20588.5338.1 ID=prot_H-paniculata_contig20588.5338.1|Name=mRNA_H-paniculata_contig20588.5338.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=55bpback to top |