prot_H-paniculata_contig20389.5279.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig20389.5279.1
Unique Nameprot_H-paniculata_contig20389.5279.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length542
Homology
BLAST of mRNA_H-paniculata_contig20389.5279.1 vs. uniprot
Match: D8LLN7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLN7_ECTSI)

HSP 1 Score: 214 bits (544), Expect = 1.780e-58
Identity = 140/251 (55.78%), Postives = 159/251 (63.35%), Query Frame = 0
Query:    1 MEVEVELDPNSQAVVFRSTRSTLYGDVVPSSAAGEEWDTGTDPFPAATSLDNKLEYFRVSFDARLRWAKGDASTEPRRRGGARNGFAGEVARRPRPVA---PRAATATSPPASQAVGDNDDGASAXXXXXAGKTVADENVDEGSPSAKSPQVVDSSGVVKAAAKERELRAERGTVFCDTQVRVQVLLPPPYNSVLPWRLLRALLGKVLSTIVAYVLPRFLELLADDFYGWQSGTRRAAAT----GRTLLGG 244
            MEVEVELD  + AVVFRSTRSTLYG+V      GEE    T+P+P A S  +++EYFRV FDARLRW  GDAS  PRR+ G R GFAG  ARRPRP A   P            A G  +     X     G  VA   V  G          ++S V      E     E  TVFCDT+++VQVLLPPPYN++LPWRL+R LLGK+LSTIVAY+LPRFLELLADDFYGWQSGTRRAAAT    GRTLLGG
Sbjct:  148 MEVEVELDRPAGAVVFRSTRSTLYGNV---GKPGEE--ASTNPWPEAGS--SQVEYFRVGFDARLRWVDGDASLAPRRQRG-RGGFAGTFARRPRPEAEPAPXXXXXXXXXXEDADGGGEAAXXVXDSRGXGGVVAPPAVPAGE--------AEASSVEPPTDGELAADVEPATVFCDTEIKVQVLLPPPYNTLLPWRLVRVLLGKLLSTIVAYILPRFLELLADDFYGWQSGTRRAAATAGETGRTLLGG 382          
BLAST of mRNA_H-paniculata_contig20389.5279.1 vs. uniprot
Match: A0A6H5KPE1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPE1_9PHAE)

HSP 1 Score: 205 bits (522), Expect = 2.030e-54
Identity = 145/254 (57.09%), Postives = 168/254 (66.14%), Query Frame = 0
Query:    1 MEVEVELDPNSQAVVFRSTRSTLYGDVVPSSAAGEEWDTGTDPFPAATSLDNKLEYFRVSFDARLRWAKGDASTEPRRRGGARNGFAGEVARRPRPVAPRAATATSPPASQAVGDNDDGASAXXXXXAGKTVADENVDEGSPSAKSPQVVDSSGVVKAAAKER----ELRA--ERGTVFCDTQVRVQVLLPPPYNSVLPWRLLRALLGKVLSTIVAYVLPRFLELLADDFYGWQSGTRRAAAT----GRTLLGG 244
            MEVEVELD  + AVVFRSTRSTLYG+V      GEE    T+P+P A S  +++EYFRV FDARL W  GDAS  PRR+ G R GFAG  ARRPRP A  A     PP++ A          XXXXX            G      P  V ++G  +A+A E     EL A  E  TVFCDT+++VQVLLPPPYN++LPWRL+RALLGK+LST VA++LPRFLELLADDFYGWQSGTRRAAAT    GRTLLGG
Sbjct:  293 MEVEVELDRPAGAVVFRSTRSTLYGNV---GKPGEE--ASTNPWPDAGS--SQVEYFRVGFDARLGWVDGDASLTPRRQRG-RGGFAGTFARRPRPEAEPAL----PPSTAAAXXX------XXXXXXXXXXXXXXXXRGDGGVVVPPAV-AAGEAEASAVEPPTDGELAADVEPATVFCDTEIKVQVLLPPPYNTLLPWRLVRALLGKLLSTTVAFILPRFLELLADDFYGWQSGTRRAAATAGETGRTLLGG 527          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20389.5279.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LLN7_ECTSI1.780e-5855.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KPE1_9PHAE2.030e-5457.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20389contigH-paniculata_contig20389:595..4444 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20389.5279.1mRNA_H-paniculata_contig20389.5279.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig20389 551..4566 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig20389.5279.1 ID=prot_H-paniculata_contig20389.5279.1|Name=mRNA_H-paniculata_contig20389.5279.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=542bp
MEVEVELDPNSQAVVFRSTRSTLYGDVVPSSAAGEEWDTGTDPFPAATSL
DNKLEYFRVSFDARLRWAKGDASTEPRRRGGARNGFAGEVARRPRPVAPR
AATATSPPASQAVGDNDDGASASASASAGKTVADENVDEGSPSAKSPQVV
DSSGVVKAAAKERELRAERGTVFCDTQVRVQVLLPPPYNSVLPWRLLRAL
LGKVLSTIVAYVLPRFLELLADDFYGWQSGTRRAAATGRTLLGGGNKQSS
NKTHQKTIKPSASGSPTNITPSTTPFNGFLGGGGGGGDGSSRGVGRDGRI
GESGSGELSSEVDRDETTTQAVGAAVGARLRSVDRNVQRLRNIRVPKGWG
NAAGETTGAGVGGLEGGGRGGAATAPPLSRPSELGENDGSGSMVNGRSGG
GRGGRGGVRLPPTLESTGVASSNTDSAMRRRANLATLDALREWATAARGA
GNGIGIISGRREAQEDRDRVGRKDATAGGNDGGGEASAPEYEDDLADFIE
DGGKAVGGEEEEAGRSRSGGGRRGRGGSGGGGRGGGPSWWG*
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