prot_H-paniculata_contig20365.5275.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig20365.5275.1 vs. uniprot
Match: W7TCB8_9STRA (Gag-pol polyprotein n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TCB8_9STRA) HSP 1 Score: 177 bits (449), Expect = 5.500e-49 Identity = 112/304 (36.84%), Postives = 162/304 (53.29%), Query Frame = 0
Query: 1 MSTLCTVFSLVTERDFELEGMGVDATYLNAPVEEELFVKPPPEFSPF-SRDKPFVRRLRKSLYGLKQSGRNWNNTLDDFLVGIGLARSTTDSCLYFSRDDGGETNLLVVVYVDDLVIAGR-REKVDEFKHNISQHFRMKDLGSLSRMLGIEVRHDRPNGPMTISQGSYIREVLKIYGFDEGRGVPTPVEGKVKTRHPSRPTSPPNR---------------------------SHLE-------LTYKRLFRYLSTVPDFGIMFGGKSNGH-GLEGFVDADWAEDVEDRKSTTGYVFKLNGGAI 267
++T+ V +L D EL+ M V+ YL + +EE+++VK PP + + S + V RLRKSLYGLKQSGRNW+ +D + G G S+ D CLY GE L++V+YVDDL+I RE V +FKH IS+ F MKDL L +LG+ ++ DR M ISQ +YI +L + + + V TP+EG + T+ + P N HL+ + KR+ RYL + G+ + G S G L G+ DAD+A D ++R+ST+GY F L+ G I
Sbjct: 64 ITTIRLVLALACILDLELDNMDVEPAYLQSDLEEKVYVKQPPGYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEI-LVIVLYVDDLIITSNSREMVGKFKHAISREFSMKDLKELDWILGMAIKRDRGKRVMEISQTAYIDMMLAKFRMADCKPVLTPMEGTL-TKMDGKDVKPDNEYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNEEHWIAAKRVLRYLKGTREVGLKYTGNSTGSFTLVGYADADYAGDKDNRRSTSGYAFTLSHGEI 365
BLAST of mRNA_H-paniculata_contig20365.5275.1 vs. uniprot
Match: W7TJ26_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ26_9STRA) HSP 1 Score: 179 bits (455), Expect = 3.360e-48 Identity = 114/315 (36.19%), Postives = 166/315 (52.70%), Query Frame = 0
Query: 1 MSTLCTVFSLVTERDFELEGMGVDATYLNAPVEEELFVKPPPEFSPFSRDK-PFVRRLRKSLYGLKQSGRNWNNTLDDFLVGIGLARSTTDSCLYFSRDDGGETNLLVVVYVDDLVIAGR-REKVDEFKHNISQHFRMKDLGSLSRMLGIEVRHDRPNGPMTISQGSYIREVLKIYGFDEGRGVPTPVEGKVKTRHPSRPTSPPNR---------------------------SHLE-------LTYKRLFRYLSTVPDFGIMFGGKSNGH-GLEGFVDADWAEDVEDRKSTTGYVFKLNGG----AIRWCSRKR 274
M+T+ V +L D EL+ M VD YL + +EE++++K PP + + + V RLRKSLYGLKQSGRNW+ +D + G GL S D CLY GE L++V+YVDDL+I R D+FK +IS+ F MKDL L +LG+ ++ +R N M ISQ YI +L +G + + V TP+EG + T+ + P N HL+ + KR+ RYL D G+ + G S G L G+ DAD+A D ++R+ST+GY F L+ G I W ++++
Sbjct: 284 MTTIRLVLALACILDLELDNMDVDTAYLQSDLEEKVYIKQPPGYEKYGPNGGELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGLHPSYADPCLYVKFASSGEI-LVIVLYVDDLIIGSNSRTMTDKFKQDISREFSMKDLKELDWILGMGIKRNRENRTMEISQTGYIGMMLNKFGMADCKSVLTPMEGTL-TKMDGKDVKPDNEYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNKEHWIAAKRVLRYLKGTRDVGLKYTGNSTGSFTLVGYADADYAGDKDNRRSTSGYTFTLSHGDDVNTIDWKAKQQ 596
BLAST of mRNA_H-paniculata_contig20365.5275.1 vs. uniprot
Match: A0A8D8HJI9_CULPI (Copia protein n=1 Tax=Culex pipiens TaxID=7175 RepID=A0A8D8HJI9_CULPI) HSP 1 Score: 173 bits (439), Expect = 4.420e-47 Identity = 103/309 (33.33%), Postives = 154/309 (49.84%), Query Frame = 0
Query: 1 MSTLCTVFSLVTERDFELEGMGVDATYLNAPVEEELFVKPPPEFSPFSRDKPFVRRLRKSLYGLKQSGRNWNNTLDDFLVGIGLARSTTDSCLYFSRDDGGETNLLVVVYVDDLVIAGRREK-VDEFKHNISQHFRMKDLGSLSRMLGIEVRHDRPNGPMTISQGSYIREVLKIYGFDEGRGVPTPVEGKVKTRH--PSRPTSPPNRS------HLELT--------------------------YKRLFRYLSTVPDFGIMFGGKSNGHGLEGFVDADWAEDVEDRKSTTGYVFKLNGGAIRWCSRKR 274
M+TL + +L + L M V +LN ++E++++ PP F R K V +L +S+YGLKQS RNWN DD++ +G RS D CLY + DG T +L+ YVDD++IAG K + K +S F MKD+ LG+ + DR G MTI Q +Y VLK +G + + P P++ ++K P T P + +L +T KR+ RYL D+ +++ + G+E F DADW D DRKS +G+V KL+G + W +RK+
Sbjct: 93 MATLRILLALANHEGWHLHQMDVKCAFLNGSLDEDIYMCQPPGFE---RGKDLVCKLNRSIYGLKQSSRNWNRRFDDYVTKLGFKRSQHDLCLYHWKADGVVTYMLI--YVDDILIAGNDLKAIRALKGKLSTEFEMKDMEEAKIFLGLRIDRDRKAGSMTIDQKAYTLGVLKRFGMENCKSSPVPMQPRLKLERGDPKELTEKPYKELVGCLMYLTVTSRPDICPAVNYFASFQSSATEEHWVHLKRVLRYLQGTLDYKLIYQRMDSAVGVEAFADADWGNDPTDRKSVSGFVLKLHGQTVNWSTRKQ 396
BLAST of mRNA_H-paniculata_contig20365.5275.1 vs. uniprot
Match: A0A2N9J6A9_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9J6A9_FAGSY) HSP 1 Score: 177 bits (449), Expect = 9.870e-47 Identity = 103/282 (36.52%), Postives = 163/282 (57.80%), Query Frame = 0
Query: 2 STLCTVFSLVTERDFELEGMGVDATYLNAPVEEELFVKPPPEFSPFSRDKPFVRRLRKSLYGLKQSGRNWNNTLDDFLVGIGLARSTTDSCLYFSRDDGGETNLLVVVYVDDLVIAGRRE-KVDEFKHNISQHFRMKDLGSLSRMLGIEVRHDRPNGPMTISQGSYIREVLKIYGFDEGRGVPTPVEG--KVKTRHP---------SRPTSPPNRSHLELTYKRLFRYLSTVPDFGIMFGGKSNGHGLEGFVDADWAEDVEDRKSTTGYVFKLNGGAIRWCS 271
+++ V +LV ++D ELE + V +L+ +EEE+F+ P F + V RL+KSLYGLKQS R W D +++ IG R D C+Y + G + + +++YVDD++IA + +V+ K + + F MKDLG+ ++LG+E+R DR + +SQ +YIR+VL+ + + + V TP+ ++ P SR + P R H K +FRYL + GI+F + + + G+VDAD+A +V+DR+STTGYVF L+GG I W S
Sbjct: 781 TSIRAVLALVADQDLELEQLDVKTAFLHGNLEEEIFMVQPEGFKQPGTEN-LVCRLKKSLYGLKQSPRQWYKRFDSYMIQIGYTRCEYDCCVYVRILEDG-SYIFLLLYVDDMLIAAKSMCEVNRLKSLLHKEFEMKDLGAAKKILGMEIRRDREARKLWLSQKNYIRKVLEKFSMLDAKPVSTPLANHFRLSGSQPDLAHAVSTVSRYMANPGREHWNAV-KWIFRYLKGTAEHGILFSRQPGTNSVVGYVDADYAGEVDDRRSTTGYVFTLSGGPICWKS 1059
BLAST of mRNA_H-paniculata_contig20365.5275.1 vs. uniprot
Match: A0A5D6YB57_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB57_9STRA) HSP 1 Score: 171 bits (432), Expect = 1.100e-46 Identity = 105/310 (33.87%), Postives = 155/310 (50.00%), Query Frame = 0
Query: 7 VFSLVTERDFELEGMGVDATYLNAPVEEELFVKPPPEFSPFSRDKPFVRRLRKSLYGLKQSGRNWNNTLDDFLVGIGLARSTTDSCLYFSRDDGGETNLLVVVYVDDLVIA-GRREKVDEFKHNISQHFRMKDLGSLSRMLGIEVRHDRPNGPMTISQGSYIREVLKIYGFDEGRGVPTPVEGKVKT---------RHPSRPTSPPNRSHLELTY--------------------------------KRLFRYLSTVPDFGIMFGGKSNGHGLEGFVDADWAEDVEDRKSTTGYVFKLNGGAIRWCSRKR 274
+ S+ + L M V +LN +EEE+++K P F ++ V +L+++LYGLKQS R WN T+D+F+ IG + TD C+Y RDD + + VV+YVDDL++A + + K +S+ F M DLG L LG+EV D +G +++ Q ++ VL +G + + V TP + +K +H P RS + KR+ RYL P GI F G +G L G+ DADWA D+E R+ST+GYVF LNGG I W S+K+
Sbjct: 90 ILSIAAQYKLVLHQMDVKTAFLNGLLEEEIYMKQPNGFVD-AKYPDHVCKLKRALYGLKQSPRMWNQTIDEFMRKIGFTKCETDHCVYVKRDD--KAMIFVVLYVDDLILACNDTDLLAATKRALSERFEMSDLGELKYCLGMEVERDDKSGDVSMRQTKFLHSVLAKFGMQDCKPVKTPQDPGLKLTKAMCEGGCKHDDTMQGVPYRSAVGAVMYLMVGTRPDLAAAVGVLSQFAADPCPTHWQALKRVLRYLQATPTHGIRFAGSGDGE-LIGYSDADWAGDIETRRSTSGYVFVLNGGCITWRSKKQ 395
BLAST of mRNA_H-paniculata_contig20365.5275.1 vs. uniprot
Match: A0A438E4C5_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438E4C5_VITVI) HSP 1 Score: 169 bits (427), Expect = 1.850e-46 Identity = 97/282 (34.40%), Postives = 156/282 (55.32%), Query Frame = 0
Query: 1 MSTLCTVFSLVTERDFELEGMGVDATYLNAPVEEELFVKPPPEFSPFSRDKPFVRRLRKSLYGLKQSGRNWNNTLDDFLVGIGLARSTTDSCLYFSRDDGGETNLLVVVYVDDLVIAGRR-EKVDEFKHNISQHFRMKDLGSLSRMLGIEVRHDRPNGPMTISQGSYIREVLKIYGFDEGRGVPTPVEGKVKTRHPSRPTSPPNRSHL-ELTYKR-----LFRYLSTVPDF----GIMFGGKSNGHGLEGFVDADWAEDVEDRKSTTGYVFKLNGGAIRWCS 271
MST+ V +V + LE + V +L+ +EE+L++ P F ++ V +LRKSLYGLKQ+ R W D+F+ IG R D C Y D + +++++YVDD++I G EK++ K +S+ F MKDLG+ ++LG+ + D+ NG + +SQ Y+++VL + +E + V TP+ K P + R ++ ++ Y ++ + T PD G++ S L+G+VDAD+A D++ RKSTTG+VF L G AI W S
Sbjct: 46 MSTIRLVLGMVAVENLHLEQLDVKTAFLHGDLEEDLYMIQPEGFIVQGQEN-LVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEADHCCYVKSFDN--SYIILLLYVDDMLIVGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDYMSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSASLKLQGYVDADFAGDIDSRKSTTGFVFTLGGTAISWTS 324
BLAST of mRNA_H-paniculata_contig20365.5275.1 vs. uniprot
Match: W7TIM1_9STRA (Gag-pol polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIM1_9STRA) HSP 1 Score: 176 bits (446), Expect = 2.210e-46 Identity = 113/315 (35.87%), Postives = 167/315 (53.02%), Query Frame = 0
Query: 1 MSTLCTVFSLVTERDFELEGMGVDATYLNAPVEEELFVKPPPEFSPFSRD-KPFVRRLRKSLYGLKQSGRNWNNTLDDFLVGIGLARSTTDSCLYFSRDDGGETNLLVVVYVDDLVIAGR-REKVDEFKHNISQHFRMKDLGSLSRMLGIEVRHDRPNGPMTISQGSYIREVLKIYGFDEGRGVPTPVEGKVKTRHPSRPTSPPNR---------------------------SHLE-------LTYKRLFRYLSTVPDFGIMFGGKSNGH-GLEGFVDADWAEDVEDRKSTTGYVFKLNGG----AIRWCSRKR 274
++T+ + ++ D EL+ M V+ YL + +EE+++VK P + + + + V RLRKSLYGLKQSGRNW+ +D + G G S+ D CLY GE L++V+YVDDL+I RE VD+FK IS+ F MKDL L +LG+ ++ +R M ISQ +YI VL +G + R V TP+EG + T+ + P N HL+ + KR+ RYL D GI + G + G L GF DAD+A D ++R+ST+GY F L+ G I W ++++
Sbjct: 293 ITTIRLILAIACILDLELDNMDVETAYLQSDLEEKVYVKQPIGYEQYGLNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEM-LVIVLYVDDLIITSNSREMVDKFKQAISREFSMKDLKELDWILGMAIKRNREKRVMEISQTAYIDMVLNKFGMADCRPVLTPMEGTL-TKMDGKDAKPDNEYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNEEHWIAAKRVLRYLKGTRDVGIRYTGNTTGSFTLVGFADADYAGDKDNRRSTSGYAFTLSHGDDINTIDWKAKQQ 605
BLAST of mRNA_H-paniculata_contig20365.5275.1 vs. uniprot
Match: H3GB98_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB98_PHYRM) HSP 1 Score: 169 bits (429), Expect = 2.730e-46 Identity = 99/297 (33.33%), Postives = 157/297 (52.86%), Query Frame = 0
Query: 21 MGVDATYLNAPVEEELFVKPPPEFSPFSRDKP-FVRRLRKSLYGLKQSGRNWNNTLDDFLVGIGLARSTTDSCLYFSRDDGGETNLLVVVYVDDLVIAGRREKVDEF-KHNISQHFRMKDLGSLSRMLGIEVRHDRPNGPMTISQGSYIREVLKIYGFDEGRGVPTPVEGKVKT---------RHPSRPTSPPNRSHL-ELTY-------------------------------KRLFRYLSTVPDFGIMFGGKSNGHGLEGFVDADWAEDVEDRKSTTGYVFKLNGGAIRWCSRKR 274
M V +LN ++E++++ P + D P V +L++SLYGLKQS R WN T+DDF++ +G + +D C+Y RD G+ + V +YVDDLV+A +++ E KH +S+ F M DLG L LG+E+++ R +G +T+ Q +++ +L +G + + V TP + +K +H + P RS + L Y KR+ RYL P G+ F + + G+ G+ DADWA D+E R+ST+GY F +NGG I W S+K+
Sbjct: 1 MDVKTAFLNGVLDEDIYMAQPDGY--VDEDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD--GQDMIFVALYVDDLVLASSNDELLELTKHALSKRFEMTDLGELEYFLGMEIKNTRDSGKVTVRQTKFLKSILTKFGMQDSKPVKTPQDPGLKLTKNMCEGGCQHEDTMKNVPYRSVVGALMYLMVATRPDLAAAVGVLSQFSADPCPTHWQALKRVLRYLQATPTHGLEFS-REDSLGMCGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQ 292
BLAST of mRNA_H-paniculata_contig20365.5275.1 vs. uniprot
Match: A0A438GDP4_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GDP4_VITVI) HSP 1 Score: 176 bits (445), Expect = 3.280e-46 Identity = 100/282 (35.46%), Postives = 158/282 (56.03%), Query Frame = 0
Query: 1 MSTLCTVFSLVTERDFELEGMGVDATYLNAPVEEELFVKPPPEFSPFSRDKPFVRRLRKSLYGLKQSGRNWNNTLDDFLVGIGLARSTTDSCLYFSRDDGGETNLLVVVYVDDLVIAGRR-EKVDEFKHNISQHFRMKDLGSLSRMLGIEVRHDRPNGPMTISQGSYIREVLKIYGFDEGRGVPTPVEGKVKTRHPSRPTSPPNRSHL-ELTYKR-----LFRYLSTVPDF----GIMFGGKSNGHGLEGFVDADWAEDVEDRKSTTGYVFKLNGGAIRWCS 271
MST+ V +V + LE + V +L+ +EE+L++ P F ++ V +LRKSLYGLKQ+ R W D+F+ IG R D C YF D + +++++YVDD++IAG EK++ K +S+ F MKDLG+ ++LG+ + D+ NG + +SQ Y+++VL + +E + V TP+ K P + R H+ ++ Y ++ + T PD G++ S L+G+VDAD+A D++ RKSTTG+VF L G AI W S
Sbjct: 690 MSTIRLVLGMVAAENLHLEQLDVKTAFLHGDLEEDLYMIQPEGFIVQGQEN-LVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEADHCCYFKSFDN--SYIILLLYVDDMLIAGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHMSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSASLKLQGYVDADFAGDIDSRKSTTGFVFTLGGTAISWTS 968
BLAST of mRNA_H-paniculata_contig20365.5275.1 vs. uniprot
Match: A0A7D9HZ03_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HZ03_PARCT) HSP 1 Score: 173 bits (438), Expect = 4.870e-46 Identity = 106/308 (34.42%), Postives = 170/308 (55.19%), Query Frame = 0
Query: 6 TVFSLVTERDFELEGMGVDATYLNAPVEEELFVKPPPEFSPFSRDKPFVRRLRKSLYGLKQSGRNWNNTLDDFLVGIGLARSTTDSCLYFSRDDGGETNLLVV-VYVDDLVIAGRR-EKVDEFKHNISQHFRMKDLGSLSRMLGIEVRHDRPNGPMTISQGSYIREVLKIYGFDEGRGVPTPVE--GKV-----------KTRHPS------------RP------------TSPPNRSHLELTYKRLFRYLSTVPDFGIMFGGKSNGHGLEGFVDADWAEDVEDRKSTTGYVFKLNGGAIRWCSRKR 274
TV +L +R +L M V A +LN +E+E+++K P F ++ +L KSLYGLKQS R WN+ LD+ L IG ++ +D C+Y +DG N+ VV ++VDD+++AG+ EK+ + K +I++ F++KD+G L +LG++V + + + I Q +Y ++K YG + + V TPV+ K+ K H S RP ++ P H KR+FRYL ++G+++ +N + GF DADWA D+ DRKST+GY F++NG A+ W S+K+
Sbjct: 241 TVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKEH-LACKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDG---NIFVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAMEDSELFNKEEHQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAV-KRIFRYLKGTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQ 540 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20365.5275.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig20365.5275.1 ID=prot_H-paniculata_contig20365.5275.1|Name=mRNA_H-paniculata_contig20365.5275.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=275bpback to top |