mRNA_H-paniculata_contig20365.5275.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig20365.5275.1 vs. uniprot
Match: A0A7D9JFU5_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9JFU5_PARCT) HSP 1 Score: 286 bits (732), Expect = 2.610e-87 Identity = 172/475 (36.21%), Postives = 259/475 (54.53%), Query Frame = 1
Query: 1 EPKSAAEALKGPEAEKWRAAMEEEWGALVKNGTWESEDPGRLPAGRKAIRTKWIIKRKLKEDGSVARYKA*LVAQGFLQVEGEDFFETSAPVARMSTLCTVFSLVTERDFELEGMGVDATYLNAPVEEELFVKPPPEFSPFSRDKP-FVRRLRKSLYGLKQSGRNWNNTLDDFLVGIGLARSTTDSCLY---FSRDDGGETNLLVVVYVDDLV-IAGRREKVDEFKHNISQHFRMKDLGSLSRMLGIEVRHDRPNGPMTISQGSYIREVLKIYGFDEGRGVPTPVEGKVKTR--------------------HPSRPTSP---------------PNRSHLELTYKRLFRYLSTVPDFGIMF----GGKSNGHGLEGFVDADWAEDVEDRKSTTGYVFKLNGGAIRWCSRKR*LVTWCSTEAEYVVAGEARKETVYLRELLGSIGFGCRGSTTLFEDNKSAINLSKGSGAHCRTK 1293
EP+S +EAL G A KW+ A++EE+ +L+ N TWE P P G I +KW++K K DG+V R+KA LVAQG+ Q G ++ E +PVAR S++ T+ +L + + E+ M V +LN +E ++++ P F ++ P +V +L+KSLYGLKQS R WN TLD FL G +S D+C+Y D+G + +++ VYVDD++ I+ ++ K + +HF M D G + +LG+ ++ DR + ISQ Y+ VL +G + + TP+E R + S T P P++ H KRL RY+ +FG+ F NG L G+ DA+WA DV+ R+ST+GYVFK+ + WCS+K+ VT +TEAEYV +A +E +++R LL IG TT++EDN+ AI +SK + H RTK
Sbjct: 13 EPQSISEALNGANASKWKQALKEEYNSLISNETWELVPP---PEGCNVIGSKWVMKIKRDADGNVDRHKARLVAQGYSQTPGINYEEVFSPVARHSSIRTLLALANKHNLEIHQMDVKTAFLNGYIEHDIYMSQPDGF--VDQEHPEYVCKLKKSLYGLKQSARCWNQTLDSFLTKNGYRKSNADNCIYVKSIKNDNGFISFVILAVYVDDIIPISNDINMLNTEKDLLCKHFEMTDQGEIHFILGMTIKRDRETKTLFISQQRYLESVLDRFGMANCKPISTPLETTYHKRTEEEEGFDKNLYQQAIGRLTYISTATRPDISAAVSILSSYMSNPSKEHWN-GVKRLLRYIKGTLNFGLKFTTSENDDENGDELYGYSDANWAGDVDSRRSTSGYVFKVANSTVSWCSKKQASVTKSTTEAEYVALSQATQEAIWMRRLLSDIGCKSEEPTTMYEDNQGAIEISKNARFHNRTK 481
BLAST of mRNA_H-paniculata_contig20365.5275.1 vs. uniprot
Match: A0A7D9HZ03_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HZ03_PARCT) HSP 1 Score: 286 bits (732), Expect = 5.710e-86 Identity = 173/470 (36.81%), Postives = 266/470 (56.60%), Query Frame = 1
Query: 1 EPKSAAEALKGPEAEKWRAAMEEEWGALVKNGTWESEDPGRLPAGRKAIRTKWIIKRKLKEDGSVARYKA*LVAQGFLQVEGEDFFETSAPVARMSTLCTVFSLVTERDFELEGMGVDATYLNAPVEEELFVKPPPEFSPFSRDKPFVRRLRKSLYGLKQSGRNWNNTLDDFLVGIGLARSTTDSCLYFSRDDGGETNLLVV-VYVDDLVIAGRR-EKVDEFKHNISQHFRMKDLGSLSRMLGIEVRHDRPNGPMTISQGSYIREVLKIYGFDEGRGVPTPVE--GKV-----------KTRHPS------------RP------------TSPPNRSHLELTYKRLFRYLSTVPDFGIMFGGKSNGHGLEGFVDADWAEDVEDRKSTTGYVFKLNGGAIRWCSRKR*LVTWCSTEAEYVVAGEARKETVYLRELLGSIGFGCRGSTTLFEDNKSAINLSKGSGAHCRTK 1293
EP + +EAL GP AE+W AM++E +L ++ WE + LP RKA+ KW+ K K DGS+ R+KA LVAQGF Q G D+ ET +PV R ++ TV +L +R +L M V A +LN +E+E+++K P F ++ +L KSLYGLKQS R WN+ LD+ L IG ++ +D C+Y +DG N+ VV ++VDD+++AG+ EK+ + K +I++ F++KD+G L +LG++V + + + I Q +Y ++K YG + + V TPV+ K+ K H S RP ++ P H KR+FRYL ++G+++ +N + GF DADWA D+ DRKST+GY F++NG A+ W S+K+ V + AEYV A +E +++R+LL + T++EDN+SAI +SK H R+K
Sbjct: 145 EPTTVSEALCGPNAERWHEAMQQEMDSLQEHDVWELTE---LPKDRKAVGCKWVFKVKHNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFESIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKEH-LACKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDG---NIFVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAMEDSELFNKEEHQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAV-KRIFRYLKGTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAAAEYVALSAAAQEALWMRQLLTDLNVNIDEPMTIYEDNQSAIAMSKNPQFHGRSK 603
BLAST of mRNA_H-paniculata_contig20365.5275.1 vs. uniprot
Match: A0A6S7H8C9_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7H8C9_PARCT) HSP 1 Score: 285 bits (730), Expect = 9.420e-84 Identity = 172/475 (36.21%), Postives = 259/475 (54.53%), Query Frame = 1
Query: 1 EPKSAAEALKGPEAEKWRAAMEEEWGALVKNGTWESEDPGRLPAGRKAIRTKWIIKRKLKEDGSVARYKA*LVAQGFLQVEGEDFFETSAPVARMSTLCTVFSLVTERDFELEGMGVDATYLNAPVEEELFVKPPPEFSPFSRDKP-FVRRLRKSLYGLKQSGRNWNNTLDDFLVGIGLARSTTDSCLY---FSRDDGGETNLLVVVYVDDLV-IAGRREKVDEFKHNISQHFRMKDLGSLSRMLGIEVRHDRPNGPMTISQGSYIREVLKIYGFDEGRGVPTPVEGKVKTR--------------------HPSRPTSP---------------PNRSHLELTYKRLFRYLSTVPDFGIMF----GGKSNGHGLEGFVDADWAEDVEDRKSTTGYVFKLNGGAIRWCSRKR*LVTWCSTEAEYVVAGEARKETVYLRELLGSIGFGCRGSTTLFEDNKSAINLSKGSGAHCRTK 1293
EP+S +EAL G A KW+ A++EE+ +L+ N TWE P P G I +KW++K K DG+V R+KA LVAQG+ Q G ++ E +PVAR S++ T+ +L + + E+ M V +LN +E ++++ P F ++ P +V +L+KSLYGLKQS R WN TLD FL G +S D+C+Y + D+G + +++ VYVDD++ I+ ++ K + +HF M D G + +LG+ ++ DR + ISQ Y+ VL +G + + TP+E R + S T P P++ H KRL RY+ +FG+ F NG L G+ DA+WA DV+ R+ST+GYVFK+ + WCS+K+ VT +TEAEYV +A +E +++R LL IG TT++EDN+ AI SK + H RTK
Sbjct: 361 EPQSISEALNGANASKWKQALKEEYNSLISNETWELVPP---PEGCNVIGSKWVMKIKRDADGNVDRHKARLVAQGYSQTPGINYEEVFSPVARHSSIRTLLALANKHNLEIHQMDVKTAFLNGYIEHDIYMSQPDGF--VDQEHPEYVCKLKKSLYGLKQSARCWNQTLDSFLTKNGYRKSNADNCIYVKSITNDNGFISFVILAVYVDDIIPISNDINMLNAEKDLLCKHFEMTDQGEIHFILGMTIKRDRETKTLFISQQKYLESVLDRFGMANCKPISTPLETTYHKRTEEEEGFDKNLYQQAIGCLTYISTATRPDISAAVSILSSYMSNPSKEHRN-GVKRLLRYIKGTLNFGLKFTTSENDDENGDKLYGYSDANWAGDVDSRRSTSGYVFKVANSTVSWCSKKQASVTKSTTEAEYVALSQATQEAIWMRRLLSDIGCKSEEPTTMYEDNQGAIESSKNARFHNRTK 829
BLAST of mRNA_H-paniculata_contig20365.5275.1 vs. uniprot
Match: A0A7D9DPP1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9DPP1_PARCT) HSP 1 Score: 288 bits (736), Expect = 1.100e-82 Identity = 173/475 (36.42%), Postives = 259/475 (54.53%), Query Frame = 1
Query: 1 EPKSAAEALKGPEAEKWRAAMEEEWGALVKNGTWESEDPGRLPAGRKAIRTKWIIKRKLKEDGSVARYKA*LVAQGFLQVEGEDFFETSAPVARMSTLCTVFSLVTERDFELEGMGVDATYLNAPVEEELFVKPPPEFSPFSRDKP-FVRRLRKSLYGLKQSGRNWNNTLDDFLVGIGLARSTTDSCLY---FSRDDGGETNLLVVVYVDDLV-IAGRREKVDEFKHNISQHFRMKDLGSLSRMLGIEVRHDRPNGPMTISQGSYIREVLKIYGFDEGRGVPTPVEGKVKTR--------------------HPSRPTSP---------------PNRSHLELTYKRLFRYLSTVPDFGIMF----GGKSNGHGLEGFVDADWAEDVEDRKSTTGYVFKLNGGAIRWCSRKR*LVTWCSTEAEYVVAGEARKETVYLRELLGSIGFGCRGSTTLFEDNKSAINLSKGSGAHCRTK 1293
EP+S +EAL G A KW+ A++EE+ +L+ N TWE P P G I +KW++K K DG+V R+KA LVAQG+ Q G D+ E +PVAR S++ T+ +L + + E+ M V +LN +E ++++ P F ++ P +V +L+KSLYGLKQS R WN TLD FL G +S D+C+Y D+G + +++ VYVDD++ I+ ++ K + +HF M D G + +LG+ ++ DR + ISQ Y+ VL +G + + TP+E R + S T P P++ H KRL RY+ +FG+ F NG L G+ DA+WA DV+ R+ST+GYVFK+ + WCS+K+ VT +TEAEYV +A +E +++R LL IG TT++EDN+ AI +SK + H RTK
Sbjct: 758 EPQSISEALNGANASKWKQALKEEYNSLISNETWELVPP---PEGCNVIGSKWVMKIKRDADGNVDRHKARLVAQGYSQTPGIDYEEVFSPVARHSSIRTLLALANKHNLEIHQMDVKTAFLNGYIEHDIYMSQPDGF--VDQEHPEYVCKLKKSLYGLKQSARCWNQTLDSFLTKNGYRKSNADNCIYVKSIKNDNGFISFVILAVYVDDIIPISNDINMLNAEKDLLCKHFEMTDQGEIHFILGMTIKRDRETKTLFISQQKYLESVLDRFGMANCKPISTPLETTYHKRTEEEEGFDKNLYQQAIGCLTYISTATRPDISAAVSILSSYMSNPSKEHWN-GVKRLLRYIKGTLNFGLKFTTSENDDENGDELYGYSDANWAGDVDSRRSTSGYVFKVANSTVSWCSKKQASVTKSTTEAEYVALSQATQEAIWMRGLLSDIGCKSEEPTTMYEDNQGAIEISKNARFHNRTK 1226
BLAST of mRNA_H-paniculata_contig20365.5275.1 vs. uniprot
Match: A0A6S7HEL0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 (Fragment) n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HEL0_PARCT) HSP 1 Score: 287 bits (735), Expect = 1.440e-82 Identity = 171/469 (36.46%), Postives = 261/469 (55.65%), Query Frame = 1
Query: 1 EPKSAAEALKGPEAEKWRAAMEEEWGALVKNGTWESEDPGRLPAGRKAIRTKWIIKRKLKEDGSVARYKA*LVAQGFLQVEGEDFFETSAPVARMSTLCTVFSLVTERDFELEGMGVDATYLNAPVEEELFVKPPPEFSPFSRDKPFVRRLRKSLYGLKQSGRNWNNTLDDFLVGIGLARSTTDSCLYFSRDDGGETNLLVVVYVDDLVIAGRR-EKVDEFKHNISQHFRMKDLGSLSRMLGIEVRHDRPNGPMTISQGSYIREVLKIYGFDEGRGVPTPVEGKVKT----------------------RHPSRPTSP---------------PNRSHLELTYKRLFRYLSTVPDFGIMFGGKSNGHGLEGFVDADWAEDVEDRKSTTGYVFKLNGGAIRWCSRKR*LVTWCSTEAEYVVAGEARKETVYLRELLGSIGFGCRGSTTLFEDNKSAINLSKGSGAHCRTK 1293
EP + +EAL GP AE+W AM++E +L ++ WE + LP RKA+ KW+ K K DGS+ R+KA LVAQGF Q G D+ ET +PV R + TV +L +R +L M V A +LN +E+E+++K P F ++ V +L KSLYGLKQS R WN+ LD+ L IG ++ +D C+Y +DG +V ++VDD+++AG+ EK+ + K +I++ F++KD+G L +LG++V + + + I Q +Y ++K YG + + V TPV+ K + S T P P H KR+FRYL ++G+++ +N + GF DADWA D+ DRKST+GY F++NG A+ W S+K+ V + EAEYV A +E +++R+LL + T++EDN+SAI +SK H R+K
Sbjct: 759 EPTTVSEALCGPNAERWHEAMQQEMDSLQEHDVWELTE---LPKDRKAVGCKWVFKVKHNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFEKIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKEH-LVCKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGDI--FVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAIEDSELFNKEEYQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAV-KRIFRYLKGTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAEAEYVALSAAAQEALWMRQLLTDLNVNIDEPMTIYEDNQSAIAMSKNPQFHGRSK 1217
BLAST of mRNA_H-paniculata_contig20365.5275.1 vs. uniprot
Match: A0A5D6YB57_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB57_9STRA) HSP 1 Score: 270 bits (691), Expect = 2.120e-82 Identity = 162/435 (37.24%), Postives = 233/435 (53.56%), Query Frame = 1
Query: 25 LKGPEAEKWRAAMEEEWGALVKNGTWESEDPGRLPAGRKAIRTKWIIKRKLKEDGSVARYKA*LVAQGFLQVEGEDFFETSAPVARMSTLCTVFSLVTERDFELEGMGVDATYLNAPVEEELFVKPPPEFSPFSRDKPFVRRLRKSLYGLKQSGRNWNNTLDDFLVGIGLARSTTDSCLYFSRDDGGETNLLVVVYVDDLVIA-GRREKVDEFKHNISQHFRMKDLGSLSRMLGIEVRHDRPNGPMTISQGSYIREVLKIYGFDEGRGVPTPVEGKVKT---------RHPSRPTSPPNRSHLELTY--------------------------------KRLFRYLSTVPDFGIMFGGKSNGHGLEGFVDADWAEDVEDRKSTTGYVFKLNGGAIRWCSRKR*LVTWCSTEAEYVVAGEARKETVYLRELLGSIG 1203
++ +A KW+ A E E+ +L KN TWE LP GRKAI +KW+ K K +G + RYKA LVA+GFLQ G DF ET APVA+ +++ + S+ + L M V +LN +EEE+++K P F ++ V +L+++LYGLKQS R WN T+D+F+ IG + TD C+Y RDD + + VV+YVDDL++A + + K +S+ F M DLG L LG+EV D +G +++ Q ++ VL +G + + V TP + +K +H P RS + KR+ RYL P GI F G +G L G+ DADWA D+E R+ST+GYVF LNGG I W S+K+ V STEAEY+ EA +E V+L+ + +G
Sbjct: 1 MESSDASKWKEACESEFESLCKNKTWELVP---LPRGRKAISSKWVFKVKETVEGLIERYKARLVAKGFLQKYGVDFEETFAPVAKFASIRIILSIAAQYKLVLHQMDVKTAFLNGLLEEEIYMKQPNGFVD-AKYPDHVCKLKRALYGLKQSPRMWNQTIDEFMRKIGFTKCETDHCVYVKRDD--KAMIFVVLYVDDLILACNDTDLLAATKRALSERFEMSDLGELKYCLGMEVERDDKSGDVSMRQTKFLHSVLAKFGMQDCKPVKTPQDPGLKLTKAMCEGGCKHDDTMQGVPYRSAVGAVMYLMVGTRPDLAAAVGVLSQFAADPCPTHWQALKRVLRYLQATPTHGIRFAGSGDGE-LIGYSDADWAGDIETRRSTSGYVFVLNGGCITWRSKKQRTVALSSTEAEYMALSEATQEAVWLKAFMRELG 428
BLAST of mRNA_H-paniculata_contig20365.5275.1 vs. uniprot
Match: A0A7M6DPI8_9CNID (Uncharacterized protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M6DPI8_9CNID) HSP 1 Score: 286 bits (731), Expect = 5.860e-82 Identity = 169/473 (35.73%), Postives = 259/473 (54.76%), Query Frame = 1
Query: 1 EPKSAAEALKGPEAEKWRAAMEEEWGALVKNGTWESEDPGRLPAGRKAIRTKWIIKRKLKEDGSVARYKA*LVAQGFLQVEGEDFFETSAPVARMSTLCTVFSLVTERDFELEGMGVDATYLNAPVEEELFVKPPPEFSPFSRDKPFVR-RLRKSLYGLKQSGRNWNNTLDDFLVGIGLARSTTDSCLYFSRDDGGETN--LLVVVYVDDLVIAGRREKV-DEFKHNISQHFRMKDLGSLSRMLGIEVRHDRPNGPMTISQGSYIREVLKIYGFDEGRGVPTPVEGKVK-----------------------------TRHP--------SRPTSPPNRSHLELTYKRLFRYLSTVPDFGIMFGGKSNGHGL-EGFVDADWAEDVEDRKSTTGYVFKLNGGAIRWCSRKR*LVTWCSTEAEYVVAGEARKETVYLRELLGSIGFGCRGSTTLFEDNKSAINLSKGSGAHCRTK 1293
EP + EAL P AE W+ A++ E+ +L++N TW+ + +P + + +KW+ K K DG + R KA LVAQG+ Q G D+ + APVA+ +++ +V ++ E D EL M V +LN +EE++F+K P F +RD P + +L+KS+YGLKQS R WN +D+FL G R+ D C+Y + G+ + L+V VYVDDL+IA ++ E K + + F M+D + +LG++V+ DR N +TI Q +++ VL + +E + V TP+E +K TR S+ S P + H + KR+ RYL D+G+++ G +G L GF DADWA D++ RKST+GYVFK+ + W S+++ +V TEAEYV +A +E ++LR L + F T +FEDN+ AI L+K H RTK
Sbjct: 775 EPTTIEEALSSPNAELWKDAIQNEYDSLIENETWKLVE---MPPDKNLVGSKWVFKHKRGADGKIQRCKARLVAQGYSQKSGIDYNDVFAPVAKYNSIRSVLAITNELDLELHQMDVKTAFLNGDLEEDIFMKQPEGF--INRDNPNMACKLQKSIYGLKQSARCWNEKMDEFLKESGFTRNDADPCIYHKQITKGDKSFTLIVAVYVDDLLIACNNIQILREQKQKLGERFEMEDKSEVHFILGMQVKRDRKNRRLTIDQNAFLSSVLNRFNMNECKPVATPLEPSMKFEKLADDEEIVKLKDYQSAIGCLTYASIGTRPDISAAVGVLSQHMSKPGKQHW-IGVKRVLRYLKGTLDYGLIYEGSESGDILLHGFADADWAGDIDTRKSTSGYVFKVGNSTVSWKSKRQSIVALSKTEAEYVALSQATQEVIWLRTLFKGMDFEQTDPTKMFEDNQGAIELAKNQPNHSRTK 1241
BLAST of mRNA_H-paniculata_contig20365.5275.1 vs. uniprot
Match: A0A6S7JEY7_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JEY7_PARCT) HSP 1 Score: 274 bits (701), Expect = 1.470e-81 Identity = 163/469 (34.75%), Postives = 255/469 (54.37%), Query Frame = 1
Query: 1 EPKSAAEALKGPEAEKWRAAMEEEWGALVKNGTWESEDPGRLPAGRKAIRTKWIIKRKLKEDGSVARYKA*LVAQGFLQVEGEDFFETSAPVARMSTLCTVFSLVTERDFELEGMGVDATYLNAPVEEELFVKPPPEFSPFSRDKPFVRRLRKSLYGLKQSGRNWNNTLDDFLVGIGLARSTTDSCLYFSRDDGGETNLLVVVYVDDLVIAGRRE-KVDEFKHNISQHFRMKDLGSLSRMLGIEVRHDRPNGPMTISQGSYIREVLKIYGFDEGRGVPTPVEGKVKTR----------------------HPSRPTSP---------------PNRSHLELTYKRLFRYLSTVPDFGIMFGGKSNGHGLEGFVDADWAEDVEDRKSTTGYVFKLNGGAIRWCSRKR*LVTWCSTEAEYVVAGEARKETVYLRELLGSIGFGCRGSTTLFEDNKSAINLSKGSGAHCRTK 1293
EP++ EAL P+ KW AME+E +L N W + LP RKA+ +KW+ + K DG+V +KA LVAQGF Q G+D+ ET +PVAR ++ TV +L + +L M V +LN ++EE+++K P F ++ V RLR+S+ GLKQS R WN+ LD L +G ++T D C+Y +++GGE ++ VYVDD+++AG+ + K++E K +++ F+MKD+G LG++V + + I Q +Y + VL+ +G + + TPV K + + S T P P H + KR+ RYL+ D G+++ G G+ DADWA D++DRKST+GYVF+++ AI W S+K+ V + EAEY+ A +E V+L++LL + G + EDN++AI ++K + H R K
Sbjct: 129 EPRTVKEALSSPQKTKWVKAMEKEMESLKTNEVWNLVE---LPENRKAVGSKWVFRVKTDADGTVETHKARLVAQGFSQTFGDDYDETFSPVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMKQPEGFIDKGKEH-LVCRLRRSICGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYV-KEEGGEI-FIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQRHYFLGVKVIQKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKKAADDSQRVDQVNYQCAVGHLLYLSTKTRPDIAYAVSDVARFSAHPTEEHW-IAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQISNAAISWRSKKQSCVALSTAEAEYMTLASATQEAVWLQQLLSDLKSKPTGPMLILEDNQAAICMAKNAQYHGRAK 590
BLAST of mRNA_H-paniculata_contig20365.5275.1 vs. uniprot
Match: A0A7D9LDA1_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9LDA1_PARCT) HSP 1 Score: 268 bits (686), Expect = 8.740e-81 Identity = 159/445 (35.73%), Postives = 258/445 (57.98%), Query Frame = 1
Query: 1 EPKSAAEALKGPEAEKWRAAMEEEWGALVKNGTWESEDPGRLPAGRKAIRTKWIIKRKLKEDGSVARYKA*LVAQGFLQVEGEDFFETSAPVARMSTLCTVFSLVTERDFELEGMGVDATYLNAPVEEELFVKPPPEFSPFSRDKP-FVRRLRKSLYGLKQSGRNWNNTLDDFLVGIGLARSTTDSCLYFS--RDDGGETNLLVV-VYVDDLV-IAGRREKVDEFKHNISQHFRMKDLGSLSRMLGIEVRHDRPNGPMTISQGSYIREVLKIYGFDEGRGVPTPVE---GKVKTRHPSRPTSPPN------RSHLELTYKRLFRYLSTVPDFGIMFGGKSNGHGLEGFVDADWAEDVEDRKSTTGYVFKLNGGAIRWCSRKR*LVTWCSTEAEYVVAGEARKETVYLRELLGSIGFGCRGSTTLFEDNKSAINLSKGSGAHCRTK 1293
+P+S AL G A++W+ AM E+ +L++N TWE P + + ++W++K K KEDGS+ R+KA +VAQG+ Q +G D+ E +PVAR ++L T+ +L E D E+ M V +LN ++ +++++ P F + DKP ++ +L+KS+YGLKQS R WN+TLD +L G +S D C+Y + DGG + +++ VYVDD++ ++ + ++ K +S+ F+M D G + +L + ++ DR TISQ +Y+ VL +G + + V TP+E KTR+ S S +SH + KR+ RYL D+G+ + N L G+ D+DWA D+ R+ T+ YVF++ + W S+++ V STEAEY+ A +E ++L+ L +GF R T+FEDN+ I L+K + H RTK
Sbjct: 18 DPESVQRALNGKYAKEWKDAMISEYSSLLENDTWELVPPC---DDQNVVGSRWVLKVKRKEDGSIDRFKARVVAQGYSQTKGADYDEVFSPVARHTSLRTLLALANEYDLEVHQMDVRTAFLNGDIDCDIYMQQPEGF--VNPDKPDYLCKLQKSIYGLKQSARCWNDTLDGYLKSRGYRKSGADGCIYVKSVKKDGGRISFVILGVYVDDIIPVSNDIQMLNSEKKALSERFKMDDRGEVHYLLRMLIKRDREARVTTISQRNYVERVLSKFGMESCKPVSTPLEPGTNDFKTRYLSCSGSTFTIYGKTWQSHW-IGVKRVLRYLKGTLDYGLKYSADENPT-LVGYSDSDWAGDINTRRLTSCYVFQVANSTVSWSSKRQRTVAKSSTEAEYIALSLATQEAIWLQRPLYDVGFKIRKPITIFEDNQGTIELAKNAKYHNRTK 455
BLAST of mRNA_H-paniculata_contig20365.5275.1 vs. uniprot
Match: A0A182GIT5_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GIT5_AEDAL) HSP 1 Score: 266 bits (681), Expect = 5.480e-80 Identity = 167/460 (36.30%), Postives = 243/460 (52.83%), Query Frame = 1
Query: 25 LKGPEAEKWRAAMEEEWGALVKNGTWESEDPGRLPAGRKAIRTKWIIKRKLKEDGSVARYKA*LVAQGFLQVEGEDFFETSAPVARMSTLCTVFSLVTERDFELEGMGVDATYLNAPVEEELFVKPPPEFSPFSRDKPFVRRLRKSLYGLKQSGRNWNNTLDDFLVGIGLARSTTDSCLYFSRDDGGETNLLVVVYVDDLVIA-GRREKVDEFKHNISQHFRMKDLGSLSRMLGIEVRHDRPNGPMTISQGSYIREVLKIYGFDEGRGVPTPVEGKVKTRHPSRPTSPPNRSHLELT-----------------------------------YKRLFRYLSTVPDFGIMFG-GKSNGHGLEGFVDADWAEDVEDRKSTTGYVFKLNGGAIRWCSRKR*LVTWCSTEAEYVVAGEARKETVYLRELLGSIGFGCRGSTTLFEDNKSAINLSKGSGAHCRTK 1293
+KGPEAE W+AAM++E +L +NGTW+ D LP GRKA+ KWI KRKL EDG+V RYKA LVAQGF Q G D+ E APV R T + ++ ++R ++ V YLN +EE +F++ PP + +RD V L+KSLYGLKQ+G WN D L + +S D CLY R+ G T L V+YVDD+VIA E+ +E +++HF++ LG +S LGI++ + ++SQ +YI+++L+ +G ++ + P++ + + P N + L KR+ RYL D ++ G G+ N LE +VDADWA DV+ RKS +GY+F GG I W SRK+ V STEAE+V + +E +++ LL + EDN+S I + A R+K
Sbjct: 1 MKGPEAELWKAAMDDEMTSLRENGTWQLTD---LPPGRKAVGCKWIFKRKLDEDGNVVRYKARLVAQGFTQKFGTDYDEVFAPVVRQVTFRVLLTVASQRGMVVKHADVKTAYLNGELEESIFMRQPPGYEDENRDA--VCSLQKSLYGLKQAGYVWNKKFDQVLKRMKFQQSKNDPCLYVRRNGKGYTYL--VIYVDDMVIACNDDEEYEEIIKTLNRHFKVTSLGDISHFLGIKINRNEKG--FSLSQQTYIKQILEQFGMNQAKPSKYPLDPGHIQQKEEQVMLPNNHQYASLIGSLLYVAVNTRPDIAVSVSILGRSVSAPTQADWNEAKRILRYLKLTMDHELVLGQGERN---LEVYVDADWANDVKSRKSNSGYLFLFGGGPICWGSRKQTCVALSSTEAEFVALAASCQELLWIDRLLTDFSVDIIKPILIHEDNQSCIKQMESGRATNRSK 448 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20365.5275.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig20365.5275.1 >prot_H-paniculata_contig20365.5275.1 ID=prot_H-paniculata_contig20365.5275.1|Name=mRNA_H-paniculata_contig20365.5275.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=275bp MSTLCTVFSLVTERDFELEGMGVDATYLNAPVEEELFVKPPPEFSPFSRDback to top mRNA from alignment at H-paniculata_contig20365:9..1619+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig20365.5275.1 ID=mRNA_H-paniculata_contig20365.5275.1|Name=mRNA_H-paniculata_contig20365.5275.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1611bp|location=Sequence derived from alignment at H-paniculata_contig20365:9..1619+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig20365:9..1619+ >mRNA_H-paniculata_contig20365.5275.1 ID=mRNA_H-paniculata_contig20365.5275.1|Name=mRNA_H-paniculata_contig20365.5275.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1650bp|location=Sequence derived from alignment at H-paniculata_contig20365:9..1619+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |