prot_H-paniculata_contig20343.5267.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig20343.5267.1
Unique Name	prot_H-paniculata_contig20343.5267.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	153

Homology

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BLAST of mRNA_H-paniculata_contig20343.5267.1 vs. uniprot
Match: A0A6H5L4Y4_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y4_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 1.440e-41
Identity = 66/151 (43.71%), Postives = 97/151 (64.24%), Query Frame = 0

Query:    1 NLTALGEKCRPICVGSTMRRTLEAGVARQHRPKLEEVHLSERQYGLAVSGSAELMGLRAKAHQQLKHCLIALDCTNAFNSVKRAVVLEEVAIHTPGLTPFVAKYYGEKPTDIIFQMDTGERRRVSSDTGIHQGDGLGPALFCMPVGPILRK 151
            +L ALGEKCRP+C+G T RR + AG  R+ +PKLEE+     Q+G+AV+G  E + + A+   Q  H ++  DC+NAFN+ KR  ++ + A   P L  ++A+ Y E P   I+ MD+GERR +   +G+ QGDG+GP LFC  + PI+ K
Sbjct:   71 SLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLK 221

[Close]

BLAST of mRNA_H-paniculata_contig20343.5267.1 vs. uniprot
Match: A0A6H5LL14_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL14_9PHAE)

HSP 1 Score: 149 bits (375), Expect = 5.780e-39
Identity = 66/151 (43.71%), Postives = 97/151 (64.24%), Query Frame = 0

Query:    1 NLTALGEKCRPICVGSTMRRTLEAGVARQHRPKLEEVHLSERQYGLAVSGSAELMGLRAKAHQQLKHCLIALDCTNAFNSVKRAVVLEEVAIHTPGLTPFVAKYYGEKPTDIIFQMDTGERRRVSSDTGIHQGDGLGPALFCMPVGPILRK 151
            +L ALGEKCRP+C+G T RR + AG  R+ +PKLEE+     Q+G+AV+G  E + + A+   Q  H ++  DC+NAFN+ KR  ++ + A   P L  ++A+ Y E P   I+ MD+GERR +   +G+ QGDG+GP LFC  + PI+ K
Sbjct:   70 SLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFTLVPIVLK 220

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BLAST of mRNA_H-paniculata_contig20343.5267.1 vs. uniprot
Match: A0A6H5KAK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAK8_9PHAE)

HSP 1 Score: 149 bits (375), Expect = 9.070e-39
Identity = 66/151 (43.71%), Postives = 98/151 (64.90%), Query Frame = 0

Query:    1 NLTALGEKCRPICVGSTMRRTLEAGVARQHRPKLEEVHLSERQYGLAVSGSAELMGLRAKAHQQLKHCLIALDCTNAFNSVKRAVVLEEVAIHTPGLTPFVAKYYGEKPTDIIFQMDTGERRRVSSDTGIHQGDGLGPALFCMPVGPILRK 151
            +L ALGEKCRP+C+G T RR + AG  R+ +PKLEE+     Q+G+AV+G  E + + A+   Q  H ++  DC+NAFN+ KR  ++ + A + P L  ++A+ Y E P   I+ MD+GERR +   +G+ QGDG+GP LFC  + PI+ K
Sbjct:  389 SLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKNVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLK 539

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BLAST of mRNA_H-paniculata_contig20343.5267.1 vs. uniprot
Match: A0A6H5K0V7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0V7_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 1.090e-38
Identity = 65/151 (43.05%), Postives = 98/151 (64.90%), Query Frame = 0

Query:    1 NLTALGEKCRPICVGSTMRRTLEAGVARQHRPKLEEVHLSERQYGLAVSGSAELMGLRAKAHQQLKHCLIALDCTNAFNSVKRAVVLEEVAIHTPGLTPFVAKYYGEKPTDIIFQMDTGERRRVSSDTGIHQGDGLGPALFCMPVGPILRK 151
            +L ALGEKCRP+C+G T RR + AG  R+ +PKLEE+     Q+G+AV+G  E + + A+   Q  H ++  DC++AFN+ KR V++ + A   P +  ++A+ Y E P   I+ MD+GERR +   +G+ QGDG+GP LFC  + PI+ K
Sbjct:   63 SLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSDAFNTGKRTVIMAQAAKSVPDVLGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLK 213

[Close]

BLAST of mRNA_H-paniculata_contig20343.5267.1 vs. uniprot
Match: A0A6H5KR59_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR59_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 1.100e-38
Identity = 65/151 (43.05%), Postives = 95/151 (62.91%), Query Frame = 0

Query:    1 NLTALGEKCRPICVGSTMRRTLEAGVARQHRPKLEEVHLSERQYGLAVSGSAELMGLRAKAHQQLKHCLIALDCTNAFNSVKRAVVLEEVAIHTPGLTPFVAKYYGEKPTDIIFQMDTGERRRVSSDTGIHQGDGLGPALFCMPVGPILRK 151
            +L ALGEKCRP+C+G T RR + AG  R+ +PKLEE+     Q+G+AV+G  E + + A+   Q  H ++  DC+NAFN+ KR  ++ + A   P L  ++A+ Y E P   I+ MD+G RR +    G+ QGDG+GP LFC  + PI+ K
Sbjct:  161 SLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGARRTIECKGGVQQGDGMGPPLFCFILVPIILK 311

[Close]

BLAST of mRNA_H-paniculata_contig20343.5267.1 vs. uniprot
Match: A0A6H5JI32_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI32_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 2.050e-38
Identity = 66/151 (43.71%), Postives = 97/151 (64.24%), Query Frame = 0

Query:    1 NLTALGEKCRPICVGSTMRRTLEAGVARQHRPKLEEVHLSERQYGLAVSGSAELMGLRAKAHQQLKHCLIALDCTNAFNSVKRAVVLEEVAIHTPGLTPFVAKYYGEKPTDIIFQMDTGERRRVSSDTGIHQGDGLGPALFCMPVGPILRK 151
            +L ALGEKCRP+C+G T RR + AG  R+ +PKLEE+     Q+G+AV+G  E + + A+   Q  H ++  DC+NAFN+ KR  ++ + A   P L  ++A+ Y E P   I+ MD+GERR +   +G+ QGDG+GP LFC  + PI+ K
Sbjct:  460 SLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLK 610

[Close]

BLAST of mRNA_H-paniculata_contig20343.5267.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 2.190e-38
Identity = 66/151 (43.71%), Postives = 97/151 (64.24%), Query Frame = 0

Query:    1 NLTALGEKCRPICVGSTMRRTLEAGVARQHRPKLEEVHLSERQYGLAVSGSAELMGLRAKAHQQLKHCLIALDCTNAFNSVKRAVVLEEVAIHTPGLTPFVAKYYGEKPTDIIFQMDTGERRRVSSDTGIHQGDGLGPALFCMPVGPILRK 151
            +L ALGEKCRP+C+G T RR + AG  R+ +PKLEE+     Q+G+AV+G  E + + A+   Q  H ++  DC+NAFN+ KR  ++ + A   P L  ++A+ Y E P   I+ MD+GERR +   +G+ QGDG+GP LFC  + PI+ K
Sbjct:  439 SLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLK 589

[Close]

BLAST of mRNA_H-paniculata_contig20343.5267.1 vs. uniprot
Match: A0A6H5KKQ2_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKQ2_9PHAE)

HSP 1 Score: 147 bits (370), Expect = 4.490e-38
Identity = 65/151 (43.05%), Postives = 97/151 (64.24%), Query Frame = 0

Query:    1 NLTALGEKCRPICVGSTMRRTLEAGVARQHRPKLEEVHLSERQYGLAVSGSAELMGLRAKAHQQLKHCLIALDCTNAFNSVKRAVVLEEVAIHTPGLTPFVAKYYGEKPTDIIFQMDTGERRRVSSDTGIHQGDGLGPALFCMPVGPILRK 151
            +L ALGEKCRP+C+G T RR + AG  R+ +PKLEE+     Q+G+AV+G  E + + A+   Q  H ++  DC+NAFN+ KR  ++ + +   P L  ++A+ Y E P   I+ MD+GERR +   +G+ QGDG+GP LFC  + PI+ K
Sbjct:  438 SLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAIDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQASKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLK 588

[Close]

BLAST of mRNA_H-paniculata_contig20343.5267.1 vs. uniprot
Match: A0A6H5KA96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA96_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 9.230e-38
Identity = 65/151 (43.05%), Postives = 96/151 (63.58%), Query Frame = 0

Query:    1 NLTALGEKCRPICVGSTMRRTLEAGVARQHRPKLEEVHLSERQYGLAVSGSAELMGLRAKAHQQLKHCLIALDCTNAFNSVKRAVVLEEVAIHTPGLTPFVAKYYGEKPTDIIFQMDTGERRRVSSDTGIHQGDGLGPALFCMPVGPILRK 151
            +L ALGEKCRP+C+G T RR + AG  R+ +PKLEE+     Q+G+AV+G  E + + A+   Q  H ++  DC+NAFN+ KR  ++ + A   P L  ++A+ Y E P   I+ MD+GE R +   +G+ QGDG+GP LFC  + PI+ K
Sbjct:  446 SLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGEHRTIECKSGVQQGDGMGPPLFCFILVPIVLK 596

[Close]

BLAST of mRNA_H-paniculata_contig20343.5267.1 vs. uniprot
Match: A0A6H5K195_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K195_9PHAE)

HSP 1 Score: 144 bits (364), Expect = 3.540e-37
Identity = 65/151 (43.05%), Postives = 94/151 (62.25%), Query Frame = 0

Query:    1 NLTALGEKCRPICVGSTMRRTLEAGVARQHRPKLEEVHLSERQYGLAVSGSAELMGLRAKAHQQLKHCLIALDCTNAFNSVKRAVVLEEVAIHTPGLTPFVAKYYGEKPTDIIFQMDTGERRRVSSDTGIHQGDGLGPALFCMPVGPILRK 151
            +L ALGEKCRP+C+G T RR + AG  R+ +PKLEE+     Q+G+A +G  E + + A+   Q  H ++  DC+NAFN  KR   + + A   P L  ++A+ Y E P   I+ MD+GERR +   +G+ QGDG+GP LFC  + PI+ K
Sbjct:  447 SLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAAAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNMGKRTATMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLK 597

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig20343.5267.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig20343.5267.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L4Y4_9PHAE	1.440e-41	43.71	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5LL14_9PHAE	5.780e-39	43.71	Reverse transcriptase domain-containing protein (F...	[more]
A0A6H5KAK8_9PHAE	9.070e-39	43.71	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K0V7_9PHAE	1.090e-38	43.05	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5KR59_9PHAE	1.100e-38	43.05	Reverse transcriptase domain-containing protein (F...	[more]
A0A6H5JI32_9PHAE	2.050e-38	43.71	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5KMQ2_9PHAE	2.190e-38	43.71	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5KKQ2_9PHAE	4.490e-38	43.05	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5KA96_9PHAE	9.230e-38	43.05	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K195_9PHAE	3.540e-37	43.05	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 8..150 e-value: 4.8E-9 score: 36.1

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig20343	contig	H-paniculata_contig20343:105..563 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig20343.5267.1	mRNA_H-paniculata_contig20343.5267.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig20343 105..563 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig20343.5267.1 ID=prot_H-paniculata_contig20343.5267.1|Name=mRNA_H-paniculata_contig20343.5267.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=153bp
NLTALGEKCRPICVGSTMRRTLEAGVARQHRPKLEEVHLSERQYGLAVSG
SAELMGLRAKAHQQLKHCLIALDCTNAFNSVKRAVVLEEVAIHTPGLTPF
VAKYYGEKPTDIIFQMDTGERRRVSSDTGIHQGDGLGPALFCMPVGPILR
KC*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000477	RT_dom