prot_H-paniculata_contig2024.5231.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2024.5231.1
Unique Nameprot_H-paniculata_contig2024.5231.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length113
Homology
[Close]
BLAST of mRNA_H-paniculata_contig2024.5231.1 vs. uniprot
Match: D7FMS3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMS3_ECTSI)

HSP 1 Score: 132 bits (333), Expect = 1.140e-36
Identity = 70/115 (60.87%), Postives = 82/115 (71.30%), Query Frame = 0 
Query:    4 HRGFRVDSFARNEGNDREVAHFKFVFTFETV-----DGASVDHNRPVLDVVHERETGKLRVRVNDGRLVETTRSA-VEINLNDVGAVLFNPKVQAKGHHLYTLQLGSNTLFSVLA 112
            HRGFR+D+FARNEG     AHFKFVFT + V     +G      RPVLD +HER TGKLR+RVNDGR + TT SA V+I + +VG VLFNP+  +KGHHLYTL L   TLFSVLA
Sbjct:  102 HRGFRLDTFARNEGETGGKAHFKFVFTLDGVVPGEGEGEESKKARPVLDAIHERATGKLRLRVNDGREMSTTESAAVDIAITNVGVVLFNPRTMSKGHHLYTLSLTGRTLFSVLA 216
[Close]
BLAST of mRNA_H-paniculata_contig2024.5231.1 vs. uniprot
Match: A0A6H5JK26_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK26_9PHAE)

HSP 1 Score: 132 bits (331), Expect = 1.260e-34
Identity = 70/117 (59.83%), Postives = 83/117 (70.94%), Query Frame = 0 
Query:    4 HRGFRVDSFARNEGNDREVAHFKFVFTFETVDGASVDHN-------RPVLDVVHERETGKLRVRVNDGRLVETTRSA-VEINLNDVGAVLFNPKVQAKGHHLYTLQLGSNTLFSVLA 112
            HRGFR+D+FARNEG     AHFKFVFT   +DGA+V          RP+LD +HER TGKLRVRVNDGR + TT SA V+I + ++G V FNP+  +KGHHLYTL L   TLFSVLA
Sbjct:  286 HRGFRLDTFARNEGETGGTAHFKFVFT---LDGAAVPDEGEDAKKARPMLDAIHERATGKLRVRVNDGREISTTESAAVDIAITNIGVVFFNPRTMSKGHHLYTLSLTGRTLFSVLA 399
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2024.5231.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FMS3_ECTSI1.140e-3660.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JK26_9PHAE1.260e-3459.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2024contigH-paniculata_contig2024:21446..22981 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2024.5231.1mRNA_H-paniculata_contig2024.5231.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2024 18406..22981 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2024.5231.1 ID=prot_H-paniculata_contig2024.5231.1|Name=mRNA_H-paniculata_contig2024.5231.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=113bp
QVAHRGFRVDSFARNEGNDREVAHFKFVFTFETVDGASVDHNRPVLDVVH
ERETGKLRVRVNDGRLVETTRSAVEINLNDVGAVLFNPKVQAKGHHLYTL
QLGSNTLFSVLA*
back to top