prot_H-paniculata_contig20234.5227.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig20234.5227.1
Unique Nameprot_H-paniculata_contig20234.5227.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length105
Homology
BLAST of mRNA_H-paniculata_contig20234.5227.1 vs. uniprot
Match: A0A6H5KU00_9PHAE (Rieske domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU00_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 7.820e-46
Identity = 63/91 (69.23%), Postives = 75/91 (82.42%), Query Frame = 0
Query:    7 WPYDWRKHWYGLGYEKDFPVGVKPFGLSIFDEPLVVYRDGDGHLQCVSDFCPHRASKLSEGMVTD-GHIECLYHGWQFNGKDGKCVHIPQV 96
            WPYDWRKHWY +GY++D   G KPF +SIFDEPL++YRD  G LQCVSDFCPHRA+KLSEG +T+ G+IECLYHGWQF G  G CV +PQ+
Sbjct:   86 WPYDWRKHWYAVGYDRDIVEGPKPFAVSIFDEPLMLYRDTSGALQCVSDFCPHRAAKLSEGQITEEGNIECLYHGWQFEGSKGTCVKVPQL 176          
BLAST of mRNA_H-paniculata_contig20234.5227.1 vs. uniprot
Match: D7FIF8_ECTSI (Rieske domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIF8_ECTSI)

HSP 1 Score: 135 bits (340), Expect = 3.530e-38
Identity = 56/83 (67.47%), Postives = 67/83 (80.72%), Query Frame = 0
Query:   15 WYGLGYEKDFPVGVKPFGLSIFDEPLVVYRDGDGHLQCVSDFCPHRASKLSEGMVT-DGHIECLYHGWQFNGKDGKCVHIPQV 96
            WY +GY++D   G KPF +SIFDEPL++YRD  G LQCVSDFCPHRA+KLSEG +T DG+IECLYHGWQF G  G CV +PQ+
Sbjct:   30 WYAVGYDRDIVEGPKPFAVSIFDEPLMLYRDTSGALQCVSDFCPHRAAKLSEGQITEDGNIECLYHGWQFEGSKGACVKVPQL 112          
BLAST of mRNA_H-paniculata_contig20234.5227.1 vs. uniprot
Match: A0A388KFK8_CHABU (Rieske domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KFK8_CHABU)

HSP 1 Score: 131 bits (329), Expect = 2.260e-33
Identity = 54/88 (61.36%), Postives = 66/88 (75.00%), Query Frame = 0
Query:    9 YDWRKHWYGLGYEKDFPVGVKPFGLSIFDEPLVVYRDGDGHLQCVSDFCPHRASKLSEGMVTDGHIECLYHGWQFNGKDGKCVHIPQV 96
            YDWR  WY +   KDFP   KP  +++FD+PLV+YRD  G ++CV D CPHR +KLSEG V +G IECLYHGWQF G+ GKCVHIPQ+
Sbjct:  189 YDWRAEWYPVYCSKDFPSD-KPVAVTLFDKPLVLYRDDKGMVRCVEDMCPHRLAKLSEGQVLNGRIECLYHGWQFEGESGKCVHIPQL 275          
BLAST of mRNA_H-paniculata_contig20234.5227.1 vs. uniprot
Match: A0A388KY13_CHABU (Rieske domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KY13_CHABU)

HSP 1 Score: 130 bits (326), Expect = 6.010e-33
Identity = 53/96 (55.21%), Postives = 71/96 (73.96%), Query Frame = 0
Query:    1 EDENEAWPYDWRKHWYGLGYEKDFPVGVKPFGLSIFDEPLVVYRDGDGHLQCVSDFCPHRASKLSEGMVTDGHIECLYHGWQFNGKDGKCVHIPQV 96
            +D  +  PYDW+  WY + Y ++FP G KP  ++IFD+PLV+YRD  G ++CV D CPHR +KLSEG + +G +ECLYHGWQF G+ GKCV IPQ+
Sbjct:  189 DDSQKQVPYDWQAEWYPVWYSREFPDG-KPVPITIFDKPLVLYRDSAGIVRCVEDKCPHRLAKLSEGQLLNGRLECLYHGWQFEGETGKCVQIPQL 283          
BLAST of mRNA_H-paniculata_contig20234.5227.1 vs. uniprot
Match: A0A251RLE2_HELAN (Rieske domain-containing protein n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251RLE2_HELAN)

HSP 1 Score: 127 bits (320), Expect = 1.810e-32
Identity = 52/88 (59.09%), Postives = 64/88 (72.73%), Query Frame = 0
Query:    9 YDWRKHWYGLGYEKDFPVGVKPFGLSIFDEPLVVYRDGDGHLQCVSDFCPHRASKLSEGMVTDGHIECLYHGWQFNGKDGKCVHIPQV 96
            YDW + WY L   KD P    P GL++FD+ +V+YRDG+G LQC  D CPHR +KLSEG + DG +ECLYHGWQF G +GKCV IPQ+
Sbjct:   73 YDWTEEWYPLYLTKDVPDDA-PLGLTVFDKQVVLYRDGNGDLQCYEDRCPHRLAKLSEGQIVDGRLECLYHGWQFEGNEGKCVKIPQL 159          
BLAST of mRNA_H-paniculata_contig20234.5227.1 vs. uniprot
Match: A0A218QBH7_9CYAN (Rieske [2Fe-2S] domain-containing protein n=1 Tax=Tolypothrix sp. NIES-4075 TaxID=2005459 RepID=A0A218QBH7_9CYAN)

HSP 1 Score: 124 bits (311), Expect = 1.540e-31
Identity = 51/93 (54.84%), Postives = 69/93 (74.19%), Query Frame = 0
Query:    9 YDWRKHWYGLGYEKDFPVGVKPFGLSIFDEPLVVYRDGDGHLQCVSDFCPHRASKLSEGMVTDGHIECLYHGWQFNGKDGKCVHIPQVYNEKK 101
            +DWR+ WY + + +D P   +P+  S++DEP V++RD DG L C+ D CPHRA+K S+G +TDG IECLYHGWQF G DG+C+HIPQ+  E K
Sbjct:   24 FDWRQCWYPVCFVQDLPKN-QPYSFSLYDEPFVLFRDQDGKLVCLVDRCPHRAAKFSDGQITDGKIECLYHGWQF-GSDGQCLHIPQLPTEAK 114          
BLAST of mRNA_H-paniculata_contig20234.5227.1 vs. uniprot
Match: A9NLU4_PICSI (Rieske domain-containing protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=A9NLU4_PICSI)

HSP 1 Score: 118 bits (295), Expect = 1.720e-31
Identity = 51/88 (57.95%), Postives = 62/88 (70.45%), Query Frame = 0
Query:    9 YDWRKHWYGLGYEKDFPVGVKPFGLSIFDEPLVVYRDGDGHLQCVSDFCPHRASKLSEGMVTDGHIECLYHGWQFNGKDGKCVHIPQV 96
            Y+W   WY L    + P    P GL++FD+ LV+Y DG+G LQC  D CPHRA+KLSEG + +G +ECLYHGWQF G DGKCV IPQV
Sbjct:   93 YNWENEWYPLYLAAEVPKDA-PLGLTVFDKQLVLYEDGNGVLQCYEDRCPHRAAKLSEGQLMEGRLECLYHGWQFEG-DGKCVKIPQV 178          
BLAST of mRNA_H-paniculata_contig20234.5227.1 vs. uniprot
Match: A0A7J8XTJ2_GOSAI (Rieske domain-containing protein (Fragment) n=1 Tax=Gossypium aridum TaxID=34290 RepID=A0A7J8XTJ2_GOSAI)

HSP 1 Score: 118 bits (296), Expect = 1.780e-31
Identity = 51/93 (54.84%), Postives = 65/93 (69.89%), Query Frame = 0
Query:    9 YDWRKHWYGLGYEKDFPVGVKPFGLSIFDEPLVVYRDGDGHLQCVSDFCPHRASKLSEGMVTDGHIECLYHGWQFNGKDGKCVHIPQVYNEKK 101
            Y+W + WY L   KD P    P GL++FD+ LV+Y+DG+G L C  D CPHR +KLSEG + DG +ECLYHGWQF G +GKCV IPQ+  + K
Sbjct:   86 YNWTEEWYPLYLTKDVPDDA-PLGLTVFDQQLVLYKDGNGVLHCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEG-NGKCVKIPQIPADAK 176          
BLAST of mRNA_H-paniculata_contig20234.5227.1 vs. uniprot
Match: V4JRA6_9GAMM (Uncharacterized protein n=2 Tax=Chromatiaceae TaxID=1046 RepID=V4JRA6_9GAMM)

HSP 1 Score: 124 bits (311), Expect = 1.980e-31
Identity = 49/93 (52.69%), Postives = 70/93 (75.27%), Query Frame = 0
Query:    9 YDWRKHWYGLGYEKDFPVGVKPFGLSIFDEPLVVYRDGDGHLQCVSDFCPHRASKLSEGMVTDGHIECLYHGWQFNGKDGKCVHIPQVYNEKK 101
            +DW +HWY + + +D P   +P G SI+DEPLV+YRDGD  L C++D CPHRA++LSEG + DG +EC YHGWQF+  +G+C HIPQ+ + ++
Sbjct:   25 FDWHQHWYPVSFLEDLPA-QQPMGFSIYDEPLVLYRDGDQRLVCLADRCPHRAARLSEGKLVDGRLECFYHGWQFDA-EGQCRHIPQMPSSRR 115          
BLAST of mRNA_H-paniculata_contig20234.5227.1 vs. uniprot
Match: A0A846B375_9CYAN (Rieske 2Fe-2S domain-containing protein n=1 Tax=Okeania sp. SIO2C9 TaxID=2607791 RepID=A0A846B375_9CYAN)

HSP 1 Score: 116 bits (290), Expect = 2.070e-31
Identity = 47/92 (51.09%), Postives = 68/92 (73.91%), Query Frame = 0
Query:   10 DWRKHWYGLGYEKDFPVGVKPFGLSIFDEPLVVYRDGDGHLQCVSDFCPHRASKLSEGMVTDGHIECLYHGWQFNGKDGKCVHIPQVYNEKK 101
            +WR  WY + + +D P   +P+  S++DEPLV++R+ +G L C++D CPHRA+KLS+G + DG IECLYHGWQF G  G+C+HIPQ+  + K
Sbjct:   24 NWRNCWYPVTFIQDLPKN-RPYSFSLYDEPLVLFRNNNGQLICLTDVCPHRAAKLSDGQIIDGKIECLYHGWQF-GNGGECLHIPQLPADAK 113          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20234.5227.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KU00_9PHAE7.820e-4669.23Rieske domain-containing protein n=1 Tax=Ectocarpu... [more]
D7FIF8_ECTSI3.530e-3867.47Rieske domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A388KFK8_CHABU2.260e-3361.36Rieske domain-containing protein n=1 Tax=Chara bra... [more]
A0A388KY13_CHABU6.010e-3355.21Rieske domain-containing protein n=1 Tax=Chara bra... [more]
A0A251RLE2_HELAN1.810e-3259.09Rieske domain-containing protein n=1 Tax=Helianthu... [more]
A0A218QBH7_9CYAN1.540e-3154.84Rieske [2Fe-2S] domain-containing protein n=1 Tax=... [more]
A9NLU4_PICSI1.720e-3157.95Rieske domain-containing protein n=1 Tax=Picea sit... [more]
A0A7J8XTJ2_GOSAI1.780e-3154.84Rieske domain-containing protein (Fragment) n=1 Ta... [more]
V4JRA6_9GAMM1.980e-3152.69Uncharacterized protein n=2 Tax=Chromatiaceae TaxI... [more]
A0A846B375_9CYAN2.070e-3151.09Rieske 2Fe-2S domain-containing protein n=1 Tax=Ok... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017941Rieske [2Fe-2S] iron-sulphur domainPFAMPF00355Rieskecoord: 14..97
e-value: 2.1E-21
score: 75.6
IPR017941Rieske [2Fe-2S] iron-sulphur domainPROSITEPS51296RIESKEcoord: 15..104
score: 28.334
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyGENE3D2.102.10.10coord: 10..104
e-value: 4.0E-29
score: 102.9
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilySUPERFAMILY50022ISP domaincoord: 7..97
NoneNo IPR availablePANTHERPTHR21266:SF29PROTEIN TIC 55, CHLOROPLASTICcoord: 3..101
NoneNo IPR availablePANTHERPTHR21266IRON-SULFUR DOMAIN CONTAINING PROTEINcoord: 3..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20234contigH-paniculata_contig20234:2634..4044 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20234.5227.1mRNA_H-paniculata_contig20234.5227.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig20234 2634..4044 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig20234.5227.1 ID=prot_H-paniculata_contig20234.5227.1|Name=mRNA_H-paniculata_contig20234.5227.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=105bp
EDENEAWPYDWRKHWYGLGYEKDFPVGVKPFGLSIFDEPLVVYRDGDGHL
QCVSDFCPHRASKLSEGMVTDGHIECLYHGWQFNGKDGKCVHIPQVYNEK
KTES*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017941Rieske_2Fe-2S
IPR036922Rieske_2Fe-2S_sf