mRNA_H-paniculata_contig20228.5223.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig20228.5223.1 vs. uniprot
Match: A0A6H5JTC6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC6_9PHAE) HSP 1 Score: 168 bits (425), Expect = 1.960e-45 Identity = 86/223 (38.57%), Postives = 124/223 (55.61%), Query Frame = 2
Query: 347 LSHTRQR*TTRGGYLG*RKGIAEAVNDKSIVRFDKTVQAVKEGEPYRSMAYKLRDKDGVKQVEKGLYFIVDGEYHRWRSLVCPTTEAATRDELVWSKRLESVRKDLEWFFGILKGRFRILKLPITFRESAQVDNVVCTCCILHNMLHSFDGLKLHEPDMDWAGPDGLVDTWLHEDRKMNFGTNGRNSNGPPERVE------DMRRRLVTHYTYRVENNEVAWL 997
+ HT++ G+ G + NDKSI+R+D V ++E Y + + + DG KG Y +VD YH+W +L+ P+ +++L +SKRLESVRKD+E FFGI+KG FRILKL I + + +DNV TCCILHNMLHS+D E + +WAG GL + W H + S+ E VE R++L+ + YR N++AWL
Sbjct: 25 VDHTKRVLAVTPGFTG-------STNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGLFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRKSKNDIAWL 240
BLAST of mRNA_H-paniculata_contig20228.5223.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 171 bits (432), Expect = 6.100e-44 Identity = 87/223 (39.01%), Postives = 125/223 (56.05%), Query Frame = 2
Query: 347 LSHTRQR*TTRGGYLG*RKGIAEAVNDKSIVRFDKTVQAVKEGEPYRSMAYKLRDKDGVKQVEKGLYFIVDGEYHRWRSLVCPTTEAATRDELVWSKRLESVRKDLEWFFGILKGRFRILKLPITFRESAQVDNVVCTCCILHNMLHSFDGLKLHEPDMDWAGPDGLVDTWLHEDRKMNFGTNGRNSNGPPERVE------DMRRRLVTHYTYRVENNEVAWL 997
+ HT++ G+ G + NDKSI+R+D V ++E Y + + + DG KG Y +VD YH+W +L+ P+ +++L +SKRLESVRKD+E FFGI+KGRFRILKL I + + +DNV TCCILHNMLHS+D E + +WAG GL + W H + S+ E VE R++L+ + YR N++AWL
Sbjct: 266 VDHTKRVLAVTPGFTG-------STNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRKSKNDIAWL 481
BLAST of mRNA_H-paniculata_contig20228.5223.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 168 bits (425), Expect = 1.320e-43 Identity = 92/213 (43.19%), Postives = 126/213 (59.15%), Query Frame = 2
Query: 380 GGYLG*RKGIAEAVNDKSIVRFDKTVQAVKEGEPYRSMAYKLRDKDGVKQVEKGLYFIVDGEYHRWRSLVCPTTEAATRDELVWSKRLESVRKDLEWFFGILKGRFRILKLPITFRESAQVDNVVCTCCILHNMLHSFDGLKLHEPDMDWAGPDGLVDTWLHEDRKMNFGTNGRNSNGPPERVE------DMRRRLVTHYTYRVENN-EVAWL 997
G L +G A NDK+I+R+DK V ++ Y YKL +DG + EKG Y +VD YH+WR+L+ P+ R +L++SKRLES RKD+E +FGILKGRFRI KL I F + +DNV TCCILHNMLHSFD + +WAG GL + D ++ + G + +G E VE +R +LVT++ YR E ++ WL
Sbjct: 195 GRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNA-ADRDPNTDYSSVG-SMDGQHEAVEVETGFGALRSKLVTNFVYRREKKRDIVWL 405
BLAST of mRNA_H-paniculata_contig20228.5223.1 vs. uniprot
Match: A0A6H5JQM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM6_9PHAE) HSP 1 Score: 163 bits (412), Expect = 2.420e-43 Identity = 81/227 (35.68%), Postives = 122/227 (53.74%), Query Frame = 2
Query: 380 GGYLG*RKGIAEAVNDKSIVRFDKTVQAVKEGEPYRSMAYKLRDKDGVKQVEKGLYFIVDGEYHRWRSLVCPTTEAATRDELVWSKRLESVRKDLEWFFGILKGRFRILKLPITFRESAQVDNVVCTCCILHNMLHSFDGLKLHEPDMDWAGPDGLVDTWLH---------------------EDRKMNFGTNGRNSNGPPERVEDMRRRLVTHYTYRVENNEVAWL 997
G L G A NDK+I+R+D V ++ Y YKLR +G ++ +G + I+D YH W +L+ P+ + + +S+ LESVRKD+E FFGILKGRFRILKL + + + +DN+ TCCILHNMLH+FDGL + + + DW G G D W H E+ + G + R P +++R+L+ + +R + N++ WL
Sbjct: 29 GRALAVTNGFTGATNDKTIIRYDSGVNNIRTESQYTEREYKLRKVNGTERTRRGCFLIMDNWYHEWVTLIAPSKYPQSNKDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGLDVFDENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLLPKEGEEEECGEGGHVRKERHPDH--AELKRQLIESFAFRKKINDITWL 253
BLAST of mRNA_H-paniculata_contig20228.5223.1 vs. uniprot
Match: A0A6H5JHC3_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHC3_9PHAE) HSP 1 Score: 168 bits (425), Expect = 2.910e-43 Identity = 89/205 (43.41%), Postives = 125/205 (60.98%), Query Frame = 2
Query: 389 LG*RKGIAEAVNDKSIVRFDKTVQAVKEGEPYRSMAYKLRDKDGVKQVEKGLYFIVDGEYHRWRSLVCPTTEAATRDELVWSKRLESVRKDLEWFFGILKGRFRILKLPITFRESAQVDNVVCTCCILHNMLHSFDGLKLHEPDMDWAGPDGLVDTWLHEDRKMNFGTNGRNSNGPPERVEDMRRRLVTHYTYRVENNEVAWLRS 1003
LG K A+NDK+IV FD+ V+ +K + + + L +DG + E+GLY IVDG YH+ CP T+DEL + K+LESVRKD+E FFGILKGRFRILK+P+ +R ++D + TCC LHNMLHS+DGL L E D +WAG DG +D W+ + N + + + +D++ +LVT+ + V W RS
Sbjct: 247 LGVSKAFPGAMNDKTIVMFDEYVRRIKT--ECKDVPFTLLGEDGSEFEERGLYLIVDGGYHK-----CPVQFPVTQDELAFRKQLESVRKDIECFFGILKGRFRILKMPLLYRGIHKLDCIFQTCCALHNMLHSYDGLSLLEKDCEWAGADGDLDPWVTTPEAESAADNSPDLHLFEDDFKDLQGKLVTNLAEMKKRGTVGWRRS 444
BLAST of mRNA_H-paniculata_contig20228.5223.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 168 bits (425), Expect = 7.840e-43 Identity = 92/213 (43.19%), Postives = 126/213 (59.15%), Query Frame = 2
Query: 380 GGYLG*RKGIAEAVNDKSIVRFDKTVQAVKEGEPYRSMAYKLRDKDGVKQVEKGLYFIVDGEYHRWRSLVCPTTEAATRDELVWSKRLESVRKDLEWFFGILKGRFRILKLPITFRESAQVDNVVCTCCILHNMLHSFDGLKLHEPDMDWAGPDGLVDTWLHEDRKMNFGTNGRNSNGPPERVE------DMRRRLVTHYTYRVENN-EVAWL 997
G L +G A NDK+I+R+DK V ++ Y YKL +DG + EKG Y +VD YH+WR+L+ P+ R +L++SKRLES RKD+E +FGILKGRFRI KL I F + +DNV TCCILHNMLHSFD + +WAG GL + D ++ + G + +G E VE +R +LVT++ YR E ++ WL
Sbjct: 286 GRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNA-ADRDPNTDYSSVG-SMDGQHEAVEVETGFGALRSKLVTNFVYRREKKRDIVWL 496
BLAST of mRNA_H-paniculata_contig20228.5223.1 vs. uniprot
Match: A0A6H5K8I3_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8I3_9PHAE) HSP 1 Score: 162 bits (410), Expect = 4.690e-41 Identity = 84/202 (41.58%), Postives = 124/202 (61.39%), Query Frame = 2
Query: 401 KGIAEAVNDKSIVRFDKTVQAVKEGEPYRSMAYKLRDKDGVKQVEKGLYFIVDGEYHRWRSLVCPTTEAATRDELVWSKRLESVRKDLEWFFGILKGRFRILKLPITFRESAQVDNVVCTCCILHNMLHSFDGLKLHEPDMDWAGPDGLVDTWL-HEDRKMNFGTNGRNSNGPPERVEDMRRRLVTHYTYRVENNEVAWLRS 1003
+G A NDK+I++FDK AV+ G Y+ + Y L+ +DG EKG + IVDG YH W+ L P + + E + ++LESVRKD E FG++KGRFRI K+ +R+ ++DN+ TC ILHNML ++DG++L EPD DWAG DG +D + H +M+ T+ + + +R++LVT++ YR V W RS
Sbjct: 253 RGFPGAQNDKTIIKFDKFAMAVRNGW-YKDVEYTLKGEDGADIKEKGPWLIVDGGYHNWKQLQSPIRAPSNKAESGFKRQLESVRKDSECCFGVVKGRFRICKMQFLYRKKERIDNIFFTCIILHNMLLAYDGIELLEPDCDWAGADGDLDKNIEHPVVRMSAPTHEDAVVECDDGFDALRQKLVTNFAYRWGQGTVGWKRS 453
BLAST of mRNA_H-paniculata_contig20228.5223.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 161 bits (408), Expect = 9.340e-41 Identity = 83/208 (39.90%), Postives = 124/208 (59.62%), Query Frame = 2
Query: 380 GGYLG*RKGIAEAVNDKSIVRFDKTVQAVKEGEPYRSMAYKLRDKDGVKQVEKGLYFIVDGEYHRWRSLVCPTTEAATRDELVWSKRLESVRKDLEWFFGILKGRFRILKLPITFRESAQVDNVVCTCCILHNMLHSFDGLKLHEPDMDWAGPDGLVDTWLHEDRKMNFGTNGRNSNGPPERVE-DMRRRLVTHYTYRVENN-EVAWL 997
G L +G + NDK+I+ D+ V ++ + Y + + KDG + KG Y IVD YH+WR L+ P+ + +L++SKRLESVRKD+E FFGILK RFRILKL +T+++ ++D V TCCILHNMLH+ DG+ E D++W G L +T H + GT N E +++R+L T++ YR ++ ++ WL
Sbjct: 241 GRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQNTSGHNLDSSSVGTKDLNDKPQVEAAHAELKRKLTTNFLYRKKHKKDIVWL 448
BLAST of mRNA_H-paniculata_contig20228.5223.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE) HSP 1 Score: 156 bits (394), Expect = 6.180e-40 Identity = 82/203 (40.39%), Postives = 120/203 (59.11%), Query Frame = 2
Query: 401 KGIAEAVNDKSIVRFDKTVQAVKEGEPYRSMAYKLRDKDGVKQVEKGLYFIVDGEYHRWRSLVCPTTEAATRDELVWSKRLESVRKDLEWFFGILKGRFRILKLPITFRESAQVDNVVCTCCILHNMLHSFDGLKLHEPDMDWAGPDGLVDTWLHEDRKM--NFGTNGRNSNGPPERVEDMRRR-LVTHYTYRVENN-EVAWL 997
+G + NDK+IV +D V ++ + Y + L ++DG KG YF+ D YH+W+ L+ P+ + D+L++SKRLESVRKD+E FFGILKGRFRILKL + ++ ++DNV TCCILHNMLH+FDG+ + +W G+ T E +FGT N E +R+R L T + YR ++ ++ WL
Sbjct: 124 EGFTGSTNDKTIVCWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTLATEPEADCGSFGTKDVNDQPQLEIGHTVRKRQLTTSFAYRKKHKKDIVWL 326
BLAST of mRNA_H-paniculata_contig20228.5223.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI) HSP 1 Score: 147 bits (372), Expect = 3.550e-37 Identity = 76/206 (36.89%), Postives = 120/206 (58.25%), Query Frame = 2
Query: 380 GGYLG*RKGIAEAVNDKSIVRFDKTVQAVKEGEPYRSMAYKLRDKDGVKQVEKGLYFIVDGEYHRWRSLVCPTTEAATRDELVWSKRLESVRKDLEWFFGILKGRFRILKLPITFRESAQVDNVVCTCCILHNMLHSFDGLKLHEPDMDWAGPDGLVDTWLHEDRKMNFGTNGRNSNGPPERVED----MRRRLVTHYTYRVENNE 985
G + +G + NDK+ V +D V+ ++ + Y + + ++DG KG Y +VD YH+W+ L+ P+ + ++L++SKRLESVRKD+E FFGILKGR RIL L + F+ ++DNV TCCILHNMLH+FDG+ + +W G+ T + E + ++ NG P+ VE +R+L T + YR ++ +
Sbjct: 72 GRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTSVTEPEADSGSVGTKDVNGRPQ-VEAGHAVRKRQLTTSFAYRKKHKK 276 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20228.5223.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig20228.5223.1 >prot_H-paniculata_contig20228.5223.1 ID=prot_H-paniculata_contig20228.5223.1|Name=mRNA_H-paniculata_contig20228.5223.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=177bp MAYKLRDKDGVKQVEKGLYFIVDGEYHRWRSLVCPTTEAATRDELVWSKRback to top mRNA from alignment at H-paniculata_contig20228:28..2090+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig20228.5223.1 ID=mRNA_H-paniculata_contig20228.5223.1|Name=mRNA_H-paniculata_contig20228.5223.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2063bp|location=Sequence derived from alignment at H-paniculata_contig20228:28..2090+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig20228:28..2090+ >mRNA_H-paniculata_contig20228.5223.1 ID=mRNA_H-paniculata_contig20228.5223.1|Name=mRNA_H-paniculata_contig20228.5223.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1062bp|location=Sequence derived from alignment at H-paniculata_contig20228:28..2090+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |