mRNA_H-paniculata_contig20204.5214.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig20204.5214.1 vs. uniprot
Match: D7FMS2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMS2_ECTSI) HSP 1 Score: 329 bits (844), Expect = 1.320e-108 Identity = 152/204 (74.51%), Postives = 173/204 (84.80%), Query Frame = 1
Query: 4 LQLAEPFDGMERGELITPLLAQHIQKNFNTVVVLQCGRSSGPKYGQNLLDIAQTINALGAPFLHQNEDIAEDVEVGDAGIDPPDFGWYVDQAEVSQVLDAWVDLRRNIIKRPFLATSEKFVDTCGADVFVASAFHPSYGEKMIECAETATDFKGCIVVRKGLEGTLGFGLGRNAEVMCGVRKKDGSYERMTYEFGPSDLGWEME 615
+QLAEPFDGM+RGEL+TPLLAQH+Q FN V V QCGRSSGPKYGQNLLDIA + +L PF+H N DI DVEVG+ GIDPP+FGWYVDQ E+S LDAWVDLRRNIIKRPFLATSEKF++TCGA V VASAFHPSY EKM+ CAETATDFKGC+VVRKGLEG+LGFGL R E++CGVRK DGS+E+M+Y F D+GWE E
Sbjct: 250 VQLAEPFDGMDRGELLTPLLAQHLQSKFNVVAVSQCGRSSGPKYGQNLLDIATGMTSLSTPFVHSNSDIERDVEVGNGGIDPPEFGWYVDQQEISLELDAWVDLRRNIIKRPFLATSEKFINTCGASVLVASAFHPSYAEKMMTCAETATDFKGCMVVRKGLEGSLGFGLARETEIVCGVRKDDGSFEKMSYTFAAKDMGWEKE 453
BLAST of mRNA_H-paniculata_contig20204.5214.1 vs. uniprot
Match: A0A835YNK2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNK2_9STRA) HSP 1 Score: 233 bits (594), Expect = 1.410e-71 Identity = 114/201 (56.72%), Postives = 145/201 (72.14%), Query Frame = 1
Query: 1 LLQLAEPFDGMERGELITPLLAQHIQKNFNTVVVLQCGRSSGPKYGQNLLDIAQTINALGAPFLHQNEDIAEDVEVGDAGIDPPDFGWYVDQAEVSQVLDAWVDLRRNIIKRPFLATSEKFVDTCGADVFVASAFHPSYGEKMIECAETATDFKGCIVVRKGLEGTLGFGLGRNAEVMCGVRKKDGSYERMTYEFGPSDLG 603
++QLAEPFDG++R L+TPL+A+H+Q+ + + V Q G +SGPKYG N D+A + A APF+ N ++A V +G P++G Y+DQ VS L WV LRRNIIKRPFLATSEK VD+CGA V +ASAFHPS+ +KM AE AT F CI+VR+GLEGTLGFGLG+ AEV CGVR DG +ERM + FGP D+G
Sbjct: 202 IVQLAEPFDGIDRSPLLTPLIARHLQRRWRALAVTQVGPTSGPKYGPNARDLALALGADEAPFMRSNAEVAW--RVARSGY-LPEYGMYIDQEAVSPALAEWVTLRRNIIKRPFLATSEKLVDSCGASVLIASAFHPSFTDKMFNMAEDATAFPACIIVRRGLEGTLGFGLGKPAEVTCGVRGSDGRFERMDFAFGPKDIG 399
BLAST of mRNA_H-paniculata_contig20204.5214.1 vs. uniprot
Match: A0A6T7WU54_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A6T7WU54_9CRYP) HSP 1 Score: 216 bits (549), Expect = 8.380e-66 Identity = 107/201 (53.23%), Postives = 137/201 (68.16%), Query Frame = 1
Query: 1 LLQLAEPFDGMERGELITPLLAQHIQKNFNTVVVLQCGRSSGPKYGQNLLDIAQTINALGAPFLHQNEDIAEDVEVGDAGIDPPDFGWYVDQAEVSQVLDAWVDLRRNIIKRPFLATSEKFVDTCGADVFVASAFHPSYGEKMIECAETATDFKGCIVVRKGLEGTLGFGLGRNAEVMCGVRKKDGSYERMTYEFGPSDLG 603
L+QLAEPFDG R E PL+A+H+Q+ + VVV QCG SSGPKYG NLL +A ++ AP N DIAE AG D P FGWYV Q + S L W +RRN++KRPFLAT+EK++DT GA V +ASAFHPS+ +KM AE A+ F+ C++VR+G EG+LG L R AE +CG R+ DG+ ER + FGP+D G
Sbjct: 120 LVQLAEPFDGTHRSESFAPLIARHLQQRWGAVVVSQCGPSSGPKYGPNLLQLALALSP-DAPLAASNLDIAE------AGADQPAFGWYVTQGDASGGLGRWGPIRRNVVKRPFLATAEKYLDTAGAGVLLASAFHPSFSDKMFLMAERASAFEACVIVRRGCEGSLGLSLARPAEFVCGRRRPDGTMERFDFAFGPADAG 313
BLAST of mRNA_H-paniculata_contig20204.5214.1 vs. uniprot
Match: A0A1G1P5S8_9BACT (Uncharacterized protein n=1 Tax=Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_50_17 TaxID=1801857 RepID=A0A1G1P5S8_9BACT) HSP 1 Score: 181 bits (458), Expect = 1.980e-52 Identity = 98/206 (47.57%), Postives = 134/206 (65.05%), Query Frame = 1
Query: 1 LLQLAEPFDGMERGELITPLLAQHIQKNFNTVVVLQCGRSSGPKYGQNLLDIAQTINALGAPFLHQNEDIAEDVEVGDAGIDPPDFGWYVDQAEVSQVLDAWVDLRRNIIKRPFLATSEKFVDTCGADVFVASAFHPSYGEKMIECAETATDFKGCIVVRKGLEGTLGFGLGRNAEVMCGVRKKDGSYERMTYEFGP-SDLGWEME 615
++Q+AEPFDG+++ ++TPLLA+H+Q VV L GR+SGPK+G NLLD+A+ L A FL +N D+ PD+GWY+ Q +S+ +D WV+LR IIKRPFLAT E+FV+ A + +ASAFHP Y EKM+ E A + G I+VR GLEGTL F L R+ +++C VR +DGSY R E+ P LG +E
Sbjct: 104 IVQIAEPFDGVDQSYMVTPLLARHVQILGYRVVSL-VGRNSGPKFGNNLLDVAE---GLQAQFLKRNVDLK---------CPKPDYGWYIHQKNLSRGMDRWVELRLQIIKRPFLATLERFVNPVRAQMIIASAFHPPYAEKMVTVGEGA-GYSGIIIVRNGLEGTLAFPLLRSVKILCSVRGRDGSYRRQELEWNPRQSLGARIE 295
BLAST of mRNA_H-paniculata_contig20204.5214.1 vs. uniprot
Match: A0A1G1NX68_9BACT (Uncharacterized protein n=1 Tax=Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_52_10 TaxID=1801858 RepID=A0A1G1NX68_9BACT) HSP 1 Score: 169 bits (428), Expect = 3.280e-47 Identity = 90/200 (45.00%), Postives = 127/200 (63.50%), Query Frame = 1
Query: 1 LLQLAEPFDGMERGELITPLLAQHIQKNFNTVVVLQCGRSSGPKYGQNLLDIAQTINALGAPFLHQNEDIAEDVEVGDAGIDPPDFGWYVDQAEVSQVLDAWVDLRRNIIKRPFLATSEKFVDTCGADVFVASAFHPSYGEKMIECAETATDFKGCIVVRKGLEGTLGFGLGRNAEVMCGVRKKDGSYERMTYEFGPSDL 600
++QLAEPFDG++ +ITPL+AQ IQ+ N VV GR+SGPK+G NLLD+A+ AL FL + +A++ P +GW+V+Q +S +D WV+ R IKRPFL+T E+F++ A + ++SAFHP YGEKM+ E A F G I+VR GLEGTL F L R A+++C R+ DG+Y+R P +
Sbjct: 174 IVQLAEPFDGVDHSNMITPLIAQFIQR-LNYRVVSHTGRNSGPKFGNNLLDLAK---ALRGRFLLSSSALADEA---------PAYGWFVNQQNLSPPIDQWVERRHQTIKRPFLSTLERFLNPFNAHIHISSAFHPPYGEKMLTICERA-GFPGSIIVRNGLEGTLAFPLTRPAKLLCSARQADGTYKRTELILRPEEF 359
BLAST of mRNA_H-paniculata_contig20204.5214.1 vs. uniprot
Match: A0A3B0W5T9_9ZZZZ (Uncharacterized protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0W5T9_9ZZZZ) HSP 1 Score: 167 bits (424), Expect = 9.940e-47 Identity = 90/200 (45.00%), Postives = 126/200 (63.00%), Query Frame = 1
Query: 1 LLQLAEPFDGMERGELITPLLAQHIQKNFNTVVVLQCGRSSGPKYGQNLLDIAQTINALGAPFLHQNEDIAEDVEVGDAGIDPPDFGWYVDQAEVSQVLDAWVDLRRNIIKRPFLATSEKFVDTCGADVFVASAFHPSYGEKMIECAETATDFKGCIVVRKGLEGTLGFGLGRNAEVMCGVRKKDGSYERMTYEFGPSDL 600
++Q++EPFDG R ITPL+A +Q N V GR+SGPK+ NLL+IAQ AL FL+ E++ + PD+GWY+ Q +S +DAWV+ R IIKRPFLAT E+F++ GA + + SAFHP+Y E M+ A+TA + G IVV+ GLEG L F L R A++ C VRK+D +YE+ + F +D+
Sbjct: 169 IVQISEPFDGFNRSYFITPLIASAVQ-NLGFRAVSLVGRNSGPKFATNLLNIAQ---ALDTSFLNTAEELNKP---------KPDYGWYIHQKNISPAIDAWVEHRHQIIKRPFLATLERFINPVGAKILITSAFHPNYVETMLSIAQTA-GYAGIIVVQYGLEGGLTFPLRRPAKLFCSVRKQDKTYEQKKFTFDATDI 354
BLAST of mRNA_H-paniculata_contig20204.5214.1 vs. uniprot
Match: A0A1G1NBX9_9BACT (Uncharacterized protein n=1 Tax=Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_48_11 TaxID=1801856 RepID=A0A1G1NBX9_9BACT) HSP 1 Score: 162 bits (409), Expect = 1.880e-44 Identity = 89/190 (46.84%), Postives = 116/190 (61.05%), Query Frame = 1
Query: 1 LLQLAEPFDGMERGELITPLLAQHIQKNFNTVVVLQCGRSSGPKYGQNLLDIAQTINALGAPFLHQNEDIAEDVEVGDAGIDPPDFGWYVDQAEVSQVLDAWVDLRRNIIKRPFLATSEKFVDTCGADVFVASAFHPSYGEKMIECAETATDFKGCIVVRKGLEGTLGFGLGRNAEVMCGVRKKDGSYER 570
L+QLAEPFDG++ + TPLLAQ++Q V+ L GR+SGPK G NLLD+A+ AL P N D+ P +GWY +Q +S LD WV+LRR +KRP AT EKF++ A + + SAFHP Y EKM AE A F IV+R GLEGTL F L R +++C R+KDG+Y+R
Sbjct: 174 LVQLAEPFDGVDHSYITTPLLAQYVQSLGYRVINL-VGRNSGPKVGNNLLDLAK---ALQIPLAAGNADLKNS---------KPSYGWYFNQENLSAPLDHWVELRRQTVKRPCFATLEKFLNPAQAQIIITSAFHPPYSEKMTTVAERA-GFPASIVIRNGLEGTLAFPLMRPVKILCSARQKDGTYQR 349
BLAST of mRNA_H-paniculata_contig20204.5214.1 vs. uniprot
Match: A0A1G1LML3_9BACT (Uncharacterized protein n=1 Tax=Omnitrophica WOR_2 bacterium GWA2_47_8 TaxID=1801840 RepID=A0A1G1LML3_9BACT) HSP 1 Score: 160 bits (405), Expect = 7.320e-44 Identity = 91/203 (44.83%), Postives = 126/203 (62.07%), Query Frame = 1
Query: 1 LLQLAEPFDGMERGELITPLLAQHIQKNFNTVVVLQCGRSSGPKYGQNLLDIAQTINALGAPFLHQNEDIAEDVEVGDAGIDP-PDFGWYVDQAEVSQVLDAWVDLRRNIIKRPFLATSEKFVDTCGADVFVASAFHPSYGEKMIECAETATDFKGCIVVRKGLEGTLGFGLGRNAEVMCGVRKKDGSYERMTYEFGP-SDLG 603
++QLAEPFDG+++ +ITPL+AQ++Q VV L GR+SGPK+G N LD+AQ AL P N+++ ++P P FGWY++Q ++S+ LD WV+ R I+KRP AT EKF++ A + + SAFH Y EKM AE A F IV+R GLEG+L F L R +++C R+KDGSY R P +D G
Sbjct: 173 IIQLAEPFDGVDQSYMITPLVAQYLQAQNYRVVNLT-GRNSGPKFGNNALDLAQ---ALNIPLAKGNQEL----------VNPKPAFGWYINQPDLSKSLDQWVERRWAIVKRPCFATLEKFLNPVKAQIIITSAFHAPYSEKMTRIAENA-GFPASIVIRNGLEGSLAFPLMRPVKLLCSARQKDGSYLREEITLDPQADFG 360
BLAST of mRNA_H-paniculata_contig20204.5214.1 vs. uniprot
Match: UPI000E0AB2C1 (anthranilate phosphoribosyltransferase n=1 Tax=Botryobacter ruber TaxID=2171629 RepID=UPI000E0AB2C1) HSP 1 Score: 157 bits (397), Expect = 1.080e-42 Identity = 89/194 (45.88%), Postives = 120/194 (61.86%), Query Frame = 1
Query: 1 LLQLAEPFDGMERGELITPLLAQHIQKNFNTVVVLQCGRSSGPKYGQNLLDIAQTINALGAPFLHQNEDIAEDVEVGDAGIDPPDFGWYVDQAEVSQVLDAWVDLRRNIIKRPFLATSEKFVDTCGADVFVASAFHPSYGEKMIECAETATDFKGCIVVRKGLEGTLGFGLGRNAEVMCGVRKKDGSYERMTYE 582
L+QLAEPFDG+E +ITP+LA H+ + VV+ GRS+GPKY N LDI + L APFL QN D+A+ P +GW +DQ +S LD WVD RR I KRPFLAT EK ++ C A + V S FH +Y +KMI A A F G IV+++GLEGTL + + + + C VR+ DGS+ +++
Sbjct: 170 LVQLAEPFDGVEHSYMITPILA-HVFQEAGYPVVVSMGRSAGPKYALNTLDIYKE---LEAPFLQQNSDLAKPA---------PKYGWALDQQVLSPALDQWVDRRRLIFKRPFLATLEKVLNPCHAGILVTSVFHITYIDKMITLAGMA-GFSGVIVLKRGLEGTLVPSIAKASGITCAVRQPDGSFLTQSFD 349
BLAST of mRNA_H-paniculata_contig20204.5214.1 vs. uniprot
Match: A0A6C0GGW9_9BACT (Anthranilate phosphoribosyltransferase n=1 Tax=Rhodocytophaga rosea TaxID=2704465 RepID=A0A6C0GGW9_9BACT) HSP 1 Score: 157 bits (396), Expect = 1.670e-42 Identity = 88/194 (45.36%), Postives = 120/194 (61.86%), Query Frame = 1
Query: 1 LLQLAEPFDGMERGELITPLLAQHIQKNFNTVVVLQCGRSSGPKYGQNLLDIAQTINALGAPFLHQNEDIAEDVEVGDAGIDPPDFGWYVDQAEVSQVLDAWVDLRRNIIKRPFLATSEKFVDTCGADVFVASAFHPSYGEKMIECAETATDFKGCIVVRKGLEGTLGFGLGRNAEVMCGVRKKDGSYERMTYE 582
++QLAEPFDG+E +ITPLLAQ QK V++ GRSSGPK N LDI Q LG F+ NE +AE P++G +DQA +S L WVD RR I+KRPFLAT EK ++ CGA + + S FH +Y EKMI+ A A F G IV+++GLEGTL + + + ++C V + DG++ T++
Sbjct: 174 IIQLAEPFDGVEHSYMITPLLAQAFQK-MGYQVIVSTGRSSGPKLTLNALDIYQ---GLGGNFIQDNESLAETT---------PEYGRILDQAALSPALAQWVDRRRLILKRPFLATLEKVLNPCGAKILITSVFHITYMEKMIDLAAMA-GFSGVIVLKRGLEGTLAPSIAKASGILCAVCQPDGTFITQTFD 353 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20204.5214.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig20204.5214.1 >prot_H-paniculata_contig20204.5214.1 ID=prot_H-paniculata_contig20204.5214.1|Name=mRNA_H-paniculata_contig20204.5214.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=195bp MERGELITPLLAQHIQKNFNTVVVLQCGRSSGPKYGQNLLDIAQTINALGback to top mRNA from alignment at H-paniculata_contig20204:250..3277- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig20204.5214.1 ID=mRNA_H-paniculata_contig20204.5214.1|Name=mRNA_H-paniculata_contig20204.5214.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3028bp|location=Sequence derived from alignment at H-paniculata_contig20204:250..3277- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig20204:250..3277- >mRNA_H-paniculata_contig20204.5214.1 ID=mRNA_H-paniculata_contig20204.5214.1|Name=mRNA_H-paniculata_contig20204.5214.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1170bp|location=Sequence derived from alignment at H-paniculata_contig20204:250..3277- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |