prot_H-paniculata_contig10808.520.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig10808.520.1
Unique Nameprot_H-paniculata_contig10808.520.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length220
Homology
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BLAST of mRNA_H-paniculata_contig10808.520.1 vs. uniprot
Match: D7FW92_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW92_ECTSI)

HSP 1 Score: 68.6 bits (166), Expect = 7.940e-10
Identity = 44/94 (46.81%), Postives = 56/94 (59.57%), Query Frame = 0 
Query:   76 VPEMFQADVIALADVALVTGKISKQDYIQALYKAVTLDPTLVEMYRADVRQLLRGTSGAGDESPWATLGALGA--------SFEPRRQPPAPVA 161
            VPE FQ D +ALADVALVTGKISKQ Y++AL+K VTLD +LV  Y  + +Q   G    G+    A + A G         + +PR+QP A  A
Sbjct:  258 VPESFQVDALALADVALVTGKISKQAYVRALHKVVTLDSSLVSAYLGERKQ---GRQEDGEGMLEAVVRAFGPEQQGRTADNDDPRQQPRAAAA 348
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10808.520.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FW92_ECTSI7.940e-1046.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10808contigH-paniculata_contig10808:884..2021 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10808.520.1mRNA_H-paniculata_contig10808.520.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig10808 884..2041 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig10808.520.1 ID=prot_H-paniculata_contig10808.520.1|Name=mRNA_H-paniculata_contig10808.520.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=220bp
MSSHVRDRLVYMIEVVLGELRRRKGAADRSTYDIGGRVDNYGGNVYAREP
GNERGHEGSFFGDGYTGYRASAHVVVPEMFQADVIALADVALVTGKISKQ
DYIQALYKAVTLDPTLVEMYRADVRQLLRGTSGAGDESPWATLGALGASF
EPRRQPPAPVATPPRYDPSLGEVRASISSQSPLPMPSAPTFSRPRGGGLA
AAAAVAASEEEEEDRNSAQG
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