mRNA_H-paniculata_contig20124.5184.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig20124.5184.1 vs. uniprot
Match: D7G0I3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0I3_ECTSI) HSP 1 Score: 93.2 bits (230), Expect = 6.390e-21 Identity = 40/54 (74.07%), Postives = 47/54 (87.04%), Query Frame = 1
Query: 70 AVEYPDYHEIVTNPMDLGTIQEKIQREDYPSLEACAKDVRRIWTNAYLYNPVRA 231
A EYPDYH+IV+ PMDLGTIQE I++ YPSLEACAKDVR +WTNAYLYNP ++
Sbjct: 2 ASEYPDYHQIVSTPMDLGTIQENIRQNVYPSLEACAKDVRTVWTNAYLYNPAKS 55
BLAST of mRNA_H-paniculata_contig20124.5184.1 vs. uniprot
Match: A0A0H2RU84_9AGAM (Bromo domain-containing protein n=1 Tax=Schizopora paradoxa TaxID=27342 RepID=A0A0H2RU84_9AGAM) HSP 1 Score: 68.9 bits (167), Expect = 7.090e-12 Identity = 29/59 (49.15%), Postives = 42/59 (71.19%), Query Frame = 1
Query: 43 AAIFNHPVSAVEYPDYHEIVTNPMDLGTIQEKIQREDYPSLEACAKDVRRIWTNAYLYN 219
A F PVS ++YPDY+EI++NPMDL T+Q+K++ + Y S + A D+ IW+N Y YN
Sbjct: 64 AEAFLKPVSKIDYPDYYEIISNPMDLQTVQKKVKTKQYKSKKEFADDLDLIWSNCYTYN 122
BLAST of mRNA_H-paniculata_contig20124.5184.1 vs. uniprot
Match: A0A0M0JNZ0_9EUKA (Bromodomain containing protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JNZ0_9EUKA) HSP 1 Score: 68.2 bits (165), Expect = 1.050e-11 Identity = 26/59 (44.07%), Postives = 42/59 (71.19%), Query Frame = 1
Query: 43 AAIFNHPVSAVEYPDYHEIVTNPMDLGTIQEKIQREDYPSLEACAKDVRRIWTNAYLYN 219
A +FN PV +YP Y+E++++PMDLGTI++K++ +Y L+A D+R +W N Y +N
Sbjct: 50 AWLFNKPVDVTKYPQYYEVISHPMDLGTIRKKLEGGEYEDLDAFTSDLRLVWHNCYTFN 108
BLAST of mRNA_H-paniculata_contig20124.5184.1 vs. uniprot
Match: D2VKM3_NAEGR (Bromodomain-containing protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VKM3_NAEGR) HSP 1 Score: 67.8 bits (164), Expect = 1.800e-11 Identity = 29/60 (48.33%), Postives = 41/60 (68.33%), Query Frame = 1
Query: 52 FNHPVSAVEY--PDYHEIVTNPMDLGTIQEKIQREDYPSLEACAKDVRRIWTNAYLYNPV 225
FN+PV V+ PDY +++ NPMDLGT+++K+ +Y + DVR IW+N YLYNPV
Sbjct: 203 FNNPVDPVQLQIPDYFDVIKNPMDLGTVEKKVNNNEYMDVYQFLDDVRVIWSNCYLYNPV 262
BLAST of mRNA_H-paniculata_contig20124.5184.1 vs. uniprot
Match: A0A7S2GTN7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2GTN7_9EUKA) HSP 1 Score: 67.0 bits (162), Expect = 2.100e-11 Identity = 35/73 (47.95%), Postives = 45/73 (61.64%), Query Frame = 1
Query: 16 PLLFFLS--PRAAIFNHPVSA--VEYPDYHEIVTNPMDLGTIQEKIQREDYPSLEACAKDVRRIWTNAYLYNP 222
PLL L P A F PV A ++ PDYH+++T PMDLGTI+ K+++ Y S A DVR +W NA YNP
Sbjct: 52 PLLQLLKQEPNALYFLQPVDAEALKLPDYHQVITRPMDLGTIESKMEQRAYQSPGAFVDDVRLVWENARRYNP 124
BLAST of mRNA_H-paniculata_contig20124.5184.1 vs. uniprot
Match: A0A8C9XGG1_SANLU (Bromo domain-containing protein n=1 Tax=Sander lucioperca TaxID=283035 RepID=A0A8C9XGG1_SANLU) HSP 1 Score: 64.7 bits (156), Expect = 2.330e-11 Identity = 29/62 (46.77%), Postives = 42/62 (67.74%), Query Frame = 1
Query: 52 FNHPVSAVEY--PDYHEIVTNPMDLGTIQEKIQREDYPSLEACAKDVRRIWTNAYLYNPVRA 231
F+ PV AV PDYH I+T+PMDLGTI+++++ Y S C +D ++TN Y+YN VR+
Sbjct: 73 FHQPVDAVSLGLPDYHTIITSPMDLGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKVRS 134
BLAST of mRNA_H-paniculata_contig20124.5184.1 vs. uniprot
Match: A0A3P9QF64_POERE (Bromo domain-containing protein n=4 Tax=Poeciliinae TaxID=586240 RepID=A0A3P9QF64_POERE) HSP 1 Score: 63.9 bits (154), Expect = 3.380e-11 Identity = 29/62 (46.77%), Postives = 42/62 (67.74%), Query Frame = 1
Query: 52 FNHPVSAVEY--PDYHEIVTNPMDLGTIQEKIQREDYPSLEACAKDVRRIWTNAYLYNPVRA 231
F PV AV PDYH+I+T+PMDLGTI+++++ Y S C +D ++TN Y+YN VR+
Sbjct: 70 FYQPVDAVSLGLPDYHKIITSPMDLGTIKKRLENNYYWSSSECLQDFNTMFTNCYIYNKVRS 131
BLAST of mRNA_H-paniculata_contig20124.5184.1 vs. uniprot
Match: A0A3Q1F985_9TELE (Bromo domain-containing protein n=1 Tax=Acanthochromis polyacanthus TaxID=80966 RepID=A0A3Q1F985_9TELE) HSP 1 Score: 63.5 bits (153), Expect = 4.000e-11 Identity = 28/62 (45.16%), Postives = 42/62 (67.74%), Query Frame = 1
Query: 52 FNHPVSAVEY--PDYHEIVTNPMDLGTIQEKIQREDYPSLEACAKDVRRIWTNAYLYNPVRA 231
F PV AV PDYH+I+T+PMD+GTI+++++ Y S C +D ++TN Y+YN VR+
Sbjct: 61 FYQPVDAVSLGLPDYHKIITSPMDMGTIKKRLENSYYWSASECMQDFNTMFTNCYIYNKVRS 122
BLAST of mRNA_H-paniculata_contig20124.5184.1 vs. uniprot
Match: UPI000C1D490B (transcription factor GTE9-like n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D490B) HSP 1 Score: 66.6 bits (161), Expect = 4.500e-11 Identity = 33/64 (51.56%), Postives = 42/64 (65.62%), Query Frame = 1
Query: 37 PRAAIFNHPVSAVEY--PDYHEIVTNPMDLGTIQEKIQREDYPSLEACAKDVRRIWTNAYLYNP 222
P FN PV V+ PDY IVT PMDLGTI++K++R+ Y + E A DVR ++NA LYNP
Sbjct: 124 PHGFAFNQPVDPVKLKIPDYFSIVTKPMDLGTIKQKLERDTYFNAEEFASDVRLTFSNAMLYNP 187
BLAST of mRNA_H-paniculata_contig20124.5184.1 vs. uniprot
Match: A0A834LWX1_RHOSS (Uncharacterized protein n=2 Tax=Rhododendron TaxID=4346 RepID=A0A834LWX1_RHOSS) HSP 1 Score: 66.6 bits (161), Expect = 4.570e-11 Identity = 30/66 (45.45%), Postives = 45/66 (68.18%), Query Frame = 1
Query: 31 LSPRAAIFNHPVSAVEY--PDYHEIVTNPMDLGTIQEKIQREDYPSLEACAKDVRRIWTNAYLYNP 222
+ P +FNHPV V+ PDYH I+++PMDLGTI+ K+++ Y ++E A DV ++NA +YNP
Sbjct: 132 MHPAGWVFNHPVDPVKLNIPDYHSIISDPMDLGTIKTKLEKNTYSNVEDFAADVWLTFSNAMVYNP 197 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20124.5184.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig20124.5184.1 >prot_H-paniculata_contig20124.5184.1 ID=prot_H-paniculata_contig20124.5184.1|Name=mRNA_H-paniculata_contig20124.5184.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=77bp LRFFSPLLFFLSPRAAIFNHPVSAVEYPDYHEIVTNPMDLGTIQEKIQREback to top mRNA from alignment at H-paniculata_contig20124:753..4657+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig20124.5184.1 ID=mRNA_H-paniculata_contig20124.5184.1|Name=mRNA_H-paniculata_contig20124.5184.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3905bp|location=Sequence derived from alignment at H-paniculata_contig20124:753..4657+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig20124:753..4657+ >mRNA_H-paniculata_contig20124.5184.1 ID=mRNA_H-paniculata_contig20124.5184.1|Name=mRNA_H-paniculata_contig20124.5184.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=462bp|location=Sequence derived from alignment at H-paniculata_contig20124:753..4657+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |