prot_H-paniculata_contig20117.5181.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig20117.5181.1
Unique Nameprot_H-paniculata_contig20117.5181.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length86
Homology
BLAST of mRNA_H-paniculata_contig20117.5181.1 vs. uniprot
Match: D8LEC4_ECTSI (PCI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEC4_ECTSI)

HSP 1 Score: 120 bits (302), Expect = 1.280e-30
Identity = 63/88 (71.59%), Postives = 71/88 (80.68%), Query Frame = 0
Query:    1 WQALVKVFTTPEIIGYPVEHQDELEADACLAVGGPELLKKCV--FFLRIVQHNIRTVAGYYKQIYTKRLAELLGLDEAQAERNVAGKI 86
            ++ LVK+FTTPEIIGYPVE+Q+ LE+D CLA GGPELL K      LRIVQHNIRTVA YYKQI TKRLA+LLGLDE QAER VA  +
Sbjct:  294 YKMLVKLFTTPEIIGYPVENQEALESDPCLAAGGPELLAKWKEDLKLRIVQHNIRTVASYYKQINTKRLADLLGLDENQAERKVADMV 381          
BLAST of mRNA_H-paniculata_contig20117.5181.1 vs. uniprot
Match: A0A6U0K3I5_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0K3I5_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 6.920e-17
Identity = 41/84 (48.81%), Postives = 56/84 (66.67%), Query Frame = 0
Query:    5 VKVFTTPEIIGYPVEHQDELEADACLAVGGPELLK--KCVFFLRIVQHNIRTVAGYYKQIYTKRLAELLGLDEAQAERNVAGKI 86
            VK+  T EII YP ++Q ELEA +  ++GGP+L    K  F  RIVQHN+R  A YY+QI+ KRLA+LLGL+ A  E  ++  +
Sbjct:   58 VKLLLTKEIINYPFQYQAELEAMSAFSIGGPDLKAHWKKTFHTRIVQHNVRIAALYYRQIHGKRLAQLLGLEPAVLEAEISSMV 141          
BLAST of mRNA_H-paniculata_contig20117.5181.1 vs. uniprot
Match: A0A7S1ZZ80_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZZ80_TRICV)

HSP 1 Score: 77.0 bits (188), Expect = 1.380e-14
Identity = 39/84 (46.43%), Postives = 54/84 (64.29%), Query Frame = 0
Query:    5 VKVFTTPEIIGYPVEHQDELEADACLAVGGPELLKKC--VFFLRIVQHNIRTVAGYYKQIYTKRLAELLGLDEAQAERNVAGKI 86
            VK+    EII YP+ HQ ELEA     VGGP+L      +F  RIVQHN+R  A YY++I+ +RLA+LLGL+ A+ E  ++  +
Sbjct:  340 VKLLLKKEIIHYPLPHQAELEAMPSFTVGGPDLTAHWHKIFHTRIVQHNVRVAALYYRRIHGRRLAQLLGLEPAELEAEISNMV 423          
BLAST of mRNA_H-paniculata_contig20117.5181.1 vs. uniprot
Match: F0YET2_AURAN (PCI domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YET2_AURAN)

HSP 1 Score: 75.9 bits (185), Expect = 3.440e-14
Identity = 42/85 (49.41%), Postives = 55/85 (64.71%), Query Frame = 0
Query:    2 QALVKVFTTPEIIGYPV-EHQDELEADACLAVGGPE--LLKKCVFFLRIVQHNIRTVAGYYKQIYTKRLAELLGLDEAQAERNVA 83
            +AL+ +FTT EII YP+ +HQ  +E   CL   G +  L  K     R+VQHN+R VA YY+QI   RLA LLGL E +AER+V+
Sbjct:  305 KALLALFTTDEIIAYPMPDHQAAVEDHPCLKTAGDDVHLRWKKTLHTRVVQHNVRVVAKYYRQISVARLANLLGLSEDEAERHVS 389          
BLAST of mRNA_H-paniculata_contig20117.5181.1 vs. uniprot
Match: A0A1Z5J799_FISSO (26S proteasome regulatory subunit N5 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J799_FISSO)

HSP 1 Score: 74.7 bits (182), Expect = 8.820e-14
Identity = 41/86 (47.67%), Postives = 52/86 (60.47%), Query Frame = 0
Query:    1 WQALVKVFTTPEIIGYPVEHQDELEADACLAVGGPELLKKCVFFLRIVQHNIRTVAGYYKQIYTKRLAELLGLDEAQAERNVAGKI 86
            +QA V +F   EII YP  HQ E E+   L  G      K VFF RI+QHNIR  + YYK+I+  RLA+LL LD A  E+ +AG +
Sbjct:  312 YQATVHLFLKQEIIHYPTLHQAEWESSPALMEGDLGTHWKEVFFRRIIQHNIRVASLYYKRIHGSRLAQLLQLDVATLEQEIAGMV 397          
BLAST of mRNA_H-paniculata_contig20117.5181.1 vs. uniprot
Match: A0A835ZAZ9_9STRA (PCI domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAZ9_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 1.200e-13
Identity = 46/93 (49.46%), Postives = 60/93 (64.52%), Query Frame = 0
Query:    1 WQALVKVFTTPEIIGYPVEHQDELEA---DACLAVG-----GPELLKKCVFFL--RIVQHNIRTVAGYYKQIYTKRLAELLGLDEAQAERNVA 83
            ++ L+K+FTT EII YP+    ELEA   ++  A G     GP LL++ +  L  R+VQHNIR  A YYKQI T RLA LLGLDE   ER+++
Sbjct:  293 YKTLLKLFTTYEIIDYPLPFAAELEAHIKESIAATGTDPELGPPLLEQWLKDLHTRVVQHNIRVAAKYYKQIRTARLATLLGLDEGTTERSLS 385          
BLAST of mRNA_H-paniculata_contig20117.5181.1 vs. uniprot
Match: A0A6V2BEV7_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2BEV7_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 1.660e-13
Identity = 37/84 (44.05%), Postives = 52/84 (61.90%), Query Frame = 0
Query:    5 VKVFTTPEIIGYPVEHQDELEADACLAVGGPELLK--KCVFFLRIVQHNIRTVAGYYKQIYTKRLAELLGLDEAQAERNVAGKI 86
            +K+    EII +P+ HQ ELE+     +GG EL    +  F  RIVQHN+R  A YY++I+ KRLA+LLGL  A+ E  +A  +
Sbjct:  318 LKLLLRKEIINFPLPHQTELESMGAFTIGGDELTSHWRKTFHTRIVQHNVRVAALYYRRIHGKRLAQLLGLKPAELEAEIASMV 401          
BLAST of mRNA_H-paniculata_contig20117.5181.1 vs. uniprot
Match: A0A7S2V6L0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6L0_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 4.260e-13
Identity = 42/83 (50.60%), Postives = 55/83 (66.27%), Query Frame = 0
Query:    4 LVKVFTTPEIIGYPVEHQDELEADACLAVGGPELL-KKCVFFLRI--VQHNIRTVAGYYKQIYTKRLAELLGLDEAQAERNVA 83
            L  VFTT ++IGYP++ Q +LEA  CLA   P  L +K    LR   VQH+IR V+ YYK+I  +RLAELLGLD  Q E +++
Sbjct:  294 LTTVFTTQQVIGYPLQGQQDLEAHPCLARHAPPTLPQKWAQQLRTRTVQHSIRVVSKYYKRIRMQRLAELLGLDVPQTESHLS 376          
BLAST of mRNA_H-paniculata_contig20117.5181.1 vs. uniprot
Match: A0A7S4EB77_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EB77_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.700e-12
Identity = 38/87 (43.68%), Postives = 56/87 (64.37%), Query Frame = 0
Query:    4 LVKVFTTPEIIGYPV--EHQDELEADACLAVGGPELLKKCVFFLR--IVQHNIRTVAGYYKQIYTKRLAELLGLDEAQAERNVAGKI 86
            L+ +FTT EI+ YP+  EHQ  +EA   L   G E+ ++    LR  ++QHNIR V+GYY+Q+   RLA LLGL   +AE++V+  +
Sbjct:  153 LLTLFTTQEIVAYPLTEEHQRAVEAHPALHTAGAEIHQRWKNTLRERVIQHNIRVVSGYYRQLSMARLANLLGLSVDEAEKHVSDMV 239          
BLAST of mRNA_H-paniculata_contig20117.5181.1 vs. uniprot
Match: A0A7S4A230_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A230_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 2.770e-12
Identity = 38/87 (43.68%), Postives = 56/87 (64.37%), Query Frame = 0
Query:    4 LVKVFTTPEIIGYPV--EHQDELEADACLAVGGPELLKKCVFFLR--IVQHNIRTVAGYYKQIYTKRLAELLGLDEAQAERNVAGKI 86
            L+ +FTT EI+ YP+  EHQ  +EA   L   G E+ ++    LR  ++QHNIR V+GYY+Q+   RLA LLGL   +AE++V+  +
Sbjct:  306 LLTLFTTQEIVAYPLTEEHQRAVEAHPALHTAGAEIHQRWKNTLRERVIQHNIRVVSGYYRQLSMARLANLLGLSVDEAEKHVSDMV 392          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20117.5181.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEC4_ECTSI1.280e-3071.59PCI domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A6U0K3I5_9STRA6.920e-1748.81Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7S1ZZ80_TRICV1.380e-1446.43Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
F0YET2_AURAN3.440e-1449.41PCI domain-containing protein n=1 Tax=Aureococcus ... [more]
A0A1Z5J799_FISSO8.820e-1447.6726S proteasome regulatory subunit N5 n=2 Tax=Fistu... [more]
A0A835ZAZ9_9STRA1.200e-1349.46PCI domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A6V2BEV7_9STRA1.660e-1344.05Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
A0A7S2V6L0_9STRA4.260e-1350.60Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S4EB77_9STRA1.700e-1243.68Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S4A230_9STRA2.770e-1243.68Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 42..86
e-value: 2.0E-7
score: 32.8
IPR000717Proteasome component (PCI) domainPFAMPF01399PCIcoord: 1..83
e-value: 9.7E-7
score: 29.3
IPR03529726S Proteasome non-ATPase regulatory subunit 12PANTHERPTHR10855:SF126S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12coord: 2..82
IPR04013426S Proteasome non-ATPase regulatory subunit 12/COP9 signalosome complex subunit 4PANTHERPTHR1085526S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4coord: 2..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20117contigH-paniculata_contig20117:3501..4274 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20117.5181.1mRNA_H-paniculata_contig20117.5181.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig20117 3501..4274 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig20117.5181.1 ID=prot_H-paniculata_contig20117.5181.1|Name=mRNA_H-paniculata_contig20117.5181.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=86bp
WQALVKVFTTPEIIGYPVEHQDELEADACLAVGGPELLKKCVFFLRIVQH
NIRTVAGYYKQIYTKRLAELLGLDEAQAERNVAGKI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036388WH-like_DNA-bd_sf
IPR000717PCI_dom
IPR035297PSMD12
IPR040134PSMD12/CSN4