mRNA_H-paniculata_contig20088.5170.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig20088.5170.1
Unique NamemRNA_H-paniculata_contig20088.5170.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig20088.5170.1 vs. uniprot
Match: D7FWQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWQ3_ECTSI)

HSP 1 Score: 281 bits (720), Expect = 6.290e-85
Identity = 143/309 (46.28%), Postives = 197/309 (63.75%), Query Frame = 3
Query:  237 RCWIFSHLQKCGGSTVKEMIVHRWGEDFQIFDNNHWKRGDAFSARYSEILLSGKRWHVSGGGYTEGLRRH--VGDRCTWFTMFRHPVPRLVSAYFYCKGVPTDAACASERVDAKDVDLLTFAKHWGNFALRQFVLSRIDVD---DFINDSLAQGFHQRSDGLLQDSGWYMLKKYLKR------GIYGSEEEVLPDR--------ALYDMLRPVLELIENNYTAVGLLENFHESLELFNRALGMPALDWHESFSQYSIMKQEKEFAAQEKKVLASAWTNAEIKQYIALDLVLYDHAVAVFNKQKKKYGIL 1106
            +CW+F HLQKCGGSTVK M+   +G  + I+D+N WK GD  SA +   L  G+ W+V  GGYTE LRR   V   C +FT+FRHP+ R+VSAYFYC+    DAACASE VDAKDVDLLTFAKHWGNFA+RQF L  +  D   ++I    AQ  H     L + +GWY LK YL+R      G+ G  E +  +          LYD+L+P ++LI + Y AVG+LE ++ +L LF+ AL +P + W   F++    + + +    E + L  AWT++E+K+Y+ LDL+LY+HAV VF++Q + YG+L
Sbjct:  155 QCWVFMHLQKCGGSTVKYMLRRSYGSRYSIYDSNQWKLGDDISANFGVKLARGETWNVMAGGYTEALRRSEPVDAGCRFFTLFRHPIARMVSAYFYCRSTLGDAACASEVVDAKDVDLLTFAKHWGNFAVRQFALGFVPSDGVQEYIRTPEAQALHDFD--LKKIAGWYQLKMYLERPEKGDWGVPGQSEAMTVEHDAAATLEAPLYDLLQPAMDLIRSGYVAVGILEQWNTTLHLFDHALEIPGMYWGAQFAEGGKQRVDYKNKRLESETLKQAWTDSELKKYMRLDLLLYEHAVDVFHEQARGYGLL 461          
BLAST of mRNA_H-paniculata_contig20088.5170.1 vs. uniprot
Match: D7G716_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G716_ECTSI)

HSP 1 Score: 275 bits (703), Expect = 2.040e-82
Identity = 139/306 (45.42%), Postives = 192/306 (62.75%), Query Frame = 3
Query:  237 RCWIFSHLQKCGGSTVKEMIVHRWGEDFQIFDNNHWKRGDAFSARYSEILLSGKRWHVSGGGYTEGLR--RHVGDRCTWFTMFRHPVPRLVSAYFYCKGVPTDAACASERVDAKDVDLLTFAKHWGNFALRQFVLSRIDVDDFINDSLAQGFHQRSDGLLQDSGWYMLKKYLKR------GIYGSEEEVL--------PDRALYDMLRPVLELIENNYTAVGLLENFHESLELFNRALGMPALDWHESFSQYSIMKQEKEFAAQEKKVLASAWTNAEIKQYIALDLVLYDHAVAVFNKQKKKYGIL 1106
            +CW+F HLQKCGGSTVK+++  RWG  F I+D+  WK GD FSA++   L  G +W+V  GGYTE LR    VG  C +FT+FRHP+ R+VSAYFYC+ V  D ACASE + AKDVDLLTFAKHWGNFALRQF L  +  DD                 +Q+   Y LK YL+R      G+ G  E +         PD  LY++L+P ++L+ + Y AVG+LE ++ +L LF+  L MP ++W E F++      +      E + L  AWT++E+K+Y+ LDL+LY+HAV VF++Q + +G+L
Sbjct:  176 QCWVFMHLQKCGGSTVKDLLEDRWGSRFFIYDSMRWKFGDEFSAKFGAKLALGDKWNVMTGGYTEALRLSEPVGAGCRFFTLFRHPIARMVSAYFYCRSVSGDVACASEVMQAKDVDLLTFAKHWGNFALRQFALGFVPSDD-----------------VQE---YQLKMYLERPQKEDGGVLGQREAMTAHQDAAATPDAPLYELLQPAMDLVRDGYVAVGILEQWNTTLRLFDHTLDMPVMNWEEQFAESGKHHVDIVNKQLEIETLQQAWTDSELKKYMRLDLLLYEHAVDVFHQQARSHGLL 461          
BLAST of mRNA_H-paniculata_contig20088.5170.1 vs. uniprot
Match: D7G715_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G715_ECTSI)

HSP 1 Score: 247 bits (631), Expect = 1.390e-72
Identity = 126/304 (41.45%), Postives = 182/304 (59.87%), Query Frame = 3
Query:  231 DTRCWIFSHLQKCGGSTVKEMIVHRWGEDFQIFDNNHWKRGDAFSARYSEILLSGKRWHVSGGGYTEGLRRHVGDR-------CTWFTMFRHPVPRLVSAYFYCKGVPTDAACASERVDAKDVDLLTFAKHWGNFALRQFVLSRIDVD---DFI---NDSLAQGFHQRSDGLLQDSGWYMLKKYLKRGIYGSEEEVLPDRALYDMLRPVLELIENNYTAVGLLENFHESLELFNRALGMPALDWHESFSQYSIMKQEKEFAAQEKKVLASAWTNAEIKQYIALDLVLYDHAVAVFNKQKKKYGI 1103
            + RCWIF+HLQK GG+TVK ++   WG +   +D+  WK+G  ++   +  L S   W  + GGY E LRR    +       C WFT+FRHPV RLVSAY+YC+  P+D  CASE V +++VDL+TFA+HWGNFALRQF L  +  D   DF+   N   A G       L+   GWYMLK +L      +++       L  M RPV++L+ +NY  VG+LE+++ +L LF+ AL MP + W E F +   +  +  F  +++ VL  A ++ EI ++++LDL LY  AV +FN+Q+  YGI
Sbjct:   85 ENRCWIFNHLQKAGGTTVKRLLFDSWGSESTTYDSYQWKKGQGYAESVAASLASPAGWSAAAGGYLEALRRTPAFQPDDERTPCRWFTVFRHPVSRLVSAYYYCREDPSDQLCASEFVSSRNVDLVTFARHWGNFALRQFALGFVSHDKVKDFLVSPNGGGAMGLTAEQVELMP--GWYMLKLFLNDRSGVADDTSPEGTRLEYMFRPVVDLLRDNYAVVGILEDWNATLSLFDSALDMPGMTWREEFERSGKLNVDTRFKGEKQDVLQQALSDPEIVKHLSLDLRLYGQAVDIFNQQRHSYGI 386          
BLAST of mRNA_H-paniculata_contig20088.5170.1 vs. uniprot
Match: D7FS84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS84_ECTSI)

HSP 1 Score: 207 bits (527), Expect = 1.560e-58
Identity = 121/306 (39.54%), Postives = 167/306 (54.58%), Query Frame = 3
Query:  258 LQKCGGSTVKEMIVHRWGEDFQI----FDNNHWKRGDAFSARYSEILLSGKRWHVSGGGYTEGLRRHVG---DRCTWFTMFRHPVPRLVSAYFYCKGVPTDAACASERVDAK--DVDLLTFAKHWGNFALRQFVLSRIDVDDFINDSL---AQGFHQRSDGLLQDSGWYMLKKYLK------------RGIYGSEEEVLPDRALYDMLRPVLELIENNYTAVGLLENFHESLELFNRALGMPALDWHESFSQYSIMKQEKEFAAQEKKVLASAWTNAEIKQYIALDLVLYDHAVAVFNKQKKKYGI 1103
            + K GGSTVK M+   W +   +    +D+  W  G  F+  +      G    +  G YTEGLR   G     C WFT+FRHP+PRLVSAYFYCK  P D  CA+  +DA   D DL  FA+HWG+F LRQF L+ +  ++ + + +   A G      G     GWY LK YL+            RG  GS         +  +L+PV EL+ N Y AVG+LE +  SL LFN ALGMP  DW E+F        +  F  +E ++L  +WT+  +++Y++LDL+LYD+AV+V N+Q  KYG+
Sbjct:    1 MNKAGGSTVKYMLAP-WTKAQNVTVGLYDSPQWLEGKDFAQDFL-----GDENSLMWGAYTEGLRPFGGLGLRECKWFTIFRHPIPRLVSAYFYCKKKPQDGLCATVALDANADDTDLYAFAEHWGDFGLRQFALAFVLPEELLANKVKYDATGICTPYHGKRSCPGWYELKLYLQQQLDEQEQGEGSRGWDGSGAAASGAATISHLLQPVQELLTNEYAAVGVLEQWETSLLLFNEALGMPGFDWPETFGSIGKKNSDGTFHNEEAEMLLRSWTDPRLRRYLSLDLLLYDYAVSVHNQQVDKYGL 300          
BLAST of mRNA_H-paniculata_contig20088.5170.1 vs. uniprot
Match: A0A6H5JY77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY77_9PHAE)

HSP 1 Score: 205 bits (522), Expect = 2.460e-57
Identity = 118/300 (39.33%), Postives = 165/300 (55.00%), Query Frame = 3
Query:  240 CWIFSHLQKCGGSTVKEMIVH---RWGEDFQIFDNNHWKRGDAFSARYSEILLSGKRWHVSGGGYTEGLRRHVGDRCTWFTMFRHPVPRLVSAYFYCKGVPTDAACASERVDAKDVDLLTFAKHWGNFALRQFVLSRIDVDDFINDSLAQGFHQ--RSDGLLQDSGWYMLKKYL----KRGIYGSEEEVLPDRALYDMLRPVLELIENNYTAVGLLENFHESLELFNRALGMPALDWHESFSQYSIMKQE--KEFAAQEKKVLASAWTNAEIKQYIALDLVLYDHAVAVFNKQKKKYGIL 1106
            CW+FSH+ K GG TV++MI+      G    +FD+  W  G +    Y+E  +  +    + GGYTEGLR +    C WFT+FRHPV R+VSAYFYC+    D  CA+  +DA  VDLLTFA+HWGN+ LRQF L+ I  +D  ++ +   F Q  R  G +    WY  K YL    +    G  +   P+  L   L    E +   Y AVG++E +  S+ELFNR L +   DW + F Q S  K     +F    K  L +AW + E+K++I LD++LYDHA++V   Q    GI+
Sbjct:   52 CWVFSHMNKSGGMTVRKMIMPFLTEKGVSTALFDDIEWSSGRS----YAETFVK-ENAVFTYGGYTEGLRMYDDRDCKWFTVFRHPVSRVVSAYFYCQRAHHDQLCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFHNEVVSEFCQQARGHGDVCIPAWYRQKHYLHLPHQDDFCGPTQ---PESGLAQFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLRRFDWVKEF-QKSGKKNSGGSQFETASKSALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADLGIV 342          
BLAST of mRNA_H-paniculata_contig20088.5170.1 vs. uniprot
Match: A0A6H5JNJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ0_9PHAE)

HSP 1 Score: 174 bits (440), Expect = 9.220e-46
Identity = 101/301 (33.55%), Postives = 162/301 (53.82%), Query Frame = 3
Query:  240 CWIFSHLQKCGGSTVKEMI---VHRWGEDFQIFDNNHWKRGDAFSARYSEILLSGKRWHVSGGGYTEGLRRHVGDRCTWFTMFRHPVPRLVSAYFYCKGVPTDAACASERVDAKDVDLLTFAKHWGNFALRQFVLSRIDVDDFINDSLAQGFHQRSDGLLQDSGWYMLKKYLKRGI-YGSEEEVLPDRALYD---------MLRPVLELIENNYTAVGLLENFHESLELFNRALGMPALDWHESFSQYSIMKQEKEFAAQEKKVLASAWTNAEIKQYIALDLVLYDHAVAVFNKQKKKYGI 1103
            CW+F+H  K GG+TVK  +        E   +  ++ + RGD    +  + LL+ K   ++GG Y EGLR      C WFTM RHP+ RL+SA++YC G   D  CA+     +D D+  FAKHWGN+AL QF L  +D  +         F +  D       W+  K Y +  + Y        +R  +D         +L+PV EL+ +NY AVG+LE++  S+ LF+ AL +P  +W  + +  S  K + +   ++K +LA+A T+  ++QY+ LDL+LY++A ++  +Q ++Y +
Sbjct:   37 CWVFTHNNKAGGTTVKTHLRNYAESRNETVALCHSDWYARGD----KGIQDLLNDKPVLIAGG-YAEGLRTSAFQGCKWFTMMRHPIARLISAFYYCSGGNRDQLCAANIHKPEDGDIYDFAKHWGNYALLQFALGVVDQHEI--------FAEEVDA----PAWFKAKLYFEGRLGYPGNMSTATNRTTHDEWQSVWIPDILQPVEELLRSNYAAVGILEHWQRSMMLFDHALEIPGFNWTVASASLSPRKSQNKIV-EKKAMLAAAMTDPVLRQYVWLDLLLYEYACSLHEEQLRRYDL 319          
BLAST of mRNA_H-paniculata_contig20088.5170.1 vs. uniprot
Match: A0A6H5L061_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L061_9PHAE)

HSP 1 Score: 152 bits (383), Expect = 9.660e-39
Identity = 83/217 (38.25%), Postives = 124/217 (57.14%), Query Frame = 3
Query:  477 FRHPVPRLVSAYFYCKGVPTDAACASERVDAKDVDLLTFAKHWGNFALRQFVLSRIDVDDFINDSLAQGFHQRSDGLLQDSGWYMLKKYLKRGIYGSEEEVLP-------DRALYDMLRPVLELIENNYTAVGLLENFHESLELFNRALGMPALDWHESFSQYSIMKQEKEFAAQEKKVLASAWTNAEIKQYIALDLVLYDHAVAVFNKQKKKYGIL 1106
            ++ P+PRLVSAYFYCK    D  CAS  + A + DL TFAKHWGN+ LRQF L+ +  +D       +G   R    +   GWY +K+Y +      +E  L        D A+  +L+PV +L+  NY+AVG+LE +  S+ LFN+AL +P+ +W  +         +K    +E   L +AW +  + + + LD+ LYDHAVAV NKQ +++GI+
Sbjct:   18 YKCPIPRLVSAYFYCKQNGWDELCASMVLKAGNTDLHTFAKHWGNYGLRQFSLAFVGAEDVFAAEQERGIDGRP---VMFPGWYRVKEYFENQFDVEQERALMQETGASNDLAMSYLLQPVEDLLSRNYSAVGILEKWETSMTLFNKALKVPSFNWQTASRNLGRKNVDKRLHDEEAHALRAAWDDPVLAKTLWLDIFLYDHAVAVHNKQVEEHGIV 231          
BLAST of mRNA_H-paniculata_contig20088.5170.1 vs. uniprot
Match: A0A6H5JQY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQY7_9PHAE)

HSP 1 Score: 149 bits (376), Expect = 9.480e-37
Identity = 98/302 (32.45%), Postives = 157/302 (51.99%), Query Frame = 3
Query:  240 CWIFSHLQKCGGSTVKEMI---VHRWGEDFQIFDNNHWKRGDAFSARYSEILLSGKRWHVSGGGYTEGLRRHVGDR-CTWFTMFRHPVPRLVSAYFYCKGVPTDAACASERVDAKDVDLLTFAKHWGNFALRQFVLSRIDVDDFINDSLAQGFHQRSDGLLQDSGWYMLKKYL--KRGIYG--------SEEEVLPDRALYDMLRPVLELIENNYTAVGLLENFHESLELFNRALGMPALDWHESFSQYSIMKQEKEFAAQEKKVLASAWTNAEIKQYIALDLVLYDHAVAVFNKQKKKYGI 1103
            CW+++ + K GG++++ MI             F +  +  GD    R  + +L  +R  +  G YTEGLR +     C WFTM RHP+ RLVSA+ YC  VP+D  CA+     +D D+  FA+HWGN  + QF L+  D++D +   +            +   WY  K Y   + G  G        S ++V  +  + ++L+PV EL+ + Y AVG+LE +  S+ LF+ AL +P  +W  S S  S  +   +  A+   ++AS  T+  +KQ + LD++LY+HA +V   Q  +YG+
Sbjct:   37 CWVYTDMNKAGGTSIRRMIKDYAAATNTTVGEFTHTQYNAGD----RGVQQILD-RRPSLIWGAYTEGLRPYATVLGCKWFTMVRHPIARLVSAFNYCGIVPSDQLCATRIHKPEDGDIYDFAEHWGNHGVVQFALAFEDLNDILVTEV------------KSPPWYKAKLYFEGRLGPSGKTSTSANISTKDVCQNVWMPEILQPVEELLRSKYAAVGILEQWETSMMLFDHALQLPGFNWT-STSASSTPRNVHDSKAKNDLLVASM-TDPVLKQILWLDILLYEHACSVHKAQLSRYGL 319          
BLAST of mRNA_H-paniculata_contig20088.5170.1 vs. uniprot
Match: A0A6H5JT32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT32_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 1.490e-15
Identity = 83/300 (27.67%), Postives = 124/300 (41.33%), Query Frame = 3
Query:  240 CWIFSHLQKCGGSTVKEMIVHRWGEDFQIFDNNHWKRGDAFSAR---YSEILLSGKRWHVSGGGYTEGLR---RHVGDRCTWFTMFRHPVPRLVSAYFYCKGV-------PTDAACASERVDAKDVDLLTFAKH-WGNFALRQFVLSRIDVDDFINDSLAQGFHQRSDGLLQDSGWYMLKKYLKRGIYGSEEEVLPDRALYDMLRPVLELIENNYTAVGLLENFHESLELFNRALGMPALDW----HESFSQYSIMKQEKEFAAQEKKVLASAWTNAEIKQYIALDLVLYDHAVAVFNKQ 1085
            C +F+H+ K GGST+K+ +         I        G A       Y +  L          GY E LR     +G  C +FT+ RHP+ RL+SA+FYC          P     A++     D  L+ FAK+ W N A RQ         +   +    G  Q    + +  GW +L++                          +E I   YTAVG+LE +  S++LFN  +  P  DW    H +  Q S ++ E         V   A  + EI + +A D++LYD++V+VF  Q
Sbjct:  128 CTLFNHMVKSGGSTIKDKL--------DIAAKADGVDGPAMCVNGVGYEDSCLKAMHSAPVIVGYAELLRYPLEVIGRECEYFTVMRHPIDRLLSAFFYCPAYGDVQDRPPKWCGYANDPQPVTD-RLVEFAKYGWKNKAFRQMTFGLYCPPNAFCEQAEPGAQQ---AVHEPGGWILLEQ--------------------------IEAILATYTAVGILEYWDLSMQLFNARVTSPVWDWEDMEHSNRGQRSGLRDE---------VHRWAHMSPEIHRVMATDMLLYDYSVSVFKLQ 380          
BLAST of mRNA_H-paniculata_contig20088.5170.1 vs. uniprot
Match: UPI001BB22A8D (uncharacterized protein LOC121411570 n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB22A8D)

HSP 1 Score: 88.2 bits (217), Expect = 4.870e-15
Identity = 85/302 (28.15%), Postives = 138/302 (45.70%), Query Frame = 3
Query:  246 IFSHLQKCGGSTVKEMIVHRWGED-FQIFDNNHWKRGDAFSARYSEILLSGKRWHVSGGGYTEGLRRHVGDR--CTWFTMFRHPVPRLVSAYFYC-KGVPTDAACASERVDAKDVDLLTFAKHWGNFALRQFVLS-RIDVDDFINDSLAQGFHQRSDGLLQD--SGWYMLKKYLKRGIYGSEEEVLPDRALYDMLRPVLELIENNYTAVGLLENFHESLELFNRALGMP----ALDWHESFSQYSIMKQEKE----FAAQEKKVLASAWTNAEIKQYIALDLVLYDHAVAVFNKQKKKYGIL 1106
            IF H  K GG ++++ +     E    +  N    R  A    Y +     K+     GGY+ G+   + D   C++FTM R P  R VSAY YC K    D  C + R  A +V ++ +A H G+F  RQ V +  +    + N      F         D    W+  K  L+R +  SE+E L      D+L+ V + +EN +  +GLL+NF  ++ +      +P      D H++  ++   +Q+ E     A  ++++LA    NA +      DLVLY+ A  +FN+QK+ +  L
Sbjct:  103 IFLHHNKAGGISIRKCMQAVGPESGLNVSRNVFSYRYTAREFDYWKHAARTKQRMGLYGGYSFGVCDVITDGRPCSYFTMIRDPYDRAVSAYLYCSKNASKDQLCTALR--ASEVSVVDWAIHHGSFFFRQLVFNPAVCNGSYDNSPYLSNFDDFPHKFASDVIPCWFKHKVLLQRML--SEKERL------DLLKHVHDNLENYFAVIGLLDNFDLTMGMLQHVYHVPFRDRCSDTHKNQGRFRKRRQKIEADLLVAKLKRELLADPRVNASLHA----DLVLYEKAKQIFNRQKEVFKYL 390          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20088.5170.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWQ3_ECTSI6.290e-8546.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G716_ECTSI2.040e-8245.42Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G715_ECTSI1.390e-7241.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FS84_ECTSI1.560e-5839.54Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JY77_9PHAE2.460e-5739.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNJ0_9PHAE9.220e-4633.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L061_9PHAE9.660e-3938.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQY7_9PHAE9.480e-3732.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JT32_9PHAE1.490e-1527.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI001BB22A8D4.870e-1528.15uncharacterized protein LOC121411570 n=1 Tax=Lytec... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20088contigH-paniculata_contig20088:442..2235 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score285.8
Seed ortholog evalue2.7e-74
Seed eggNOG ortholog2880.D7FWQ3
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Sulfotransferase family
EggNOG OGs2CYGC@1,2S47N@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons1
Model size1794
Cds size1050
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20088.5170.1prot_H-paniculata_contig20088.5170.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig20088 501..1550 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929515.4164317-UTR-H-paniculata_contig20088:441..5001622929515.4164317-UTR-H-paniculata_contig20088:441..500Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig20088 442..500 +
1691480894.4890225-UTR-H-paniculata_contig20088:441..5001691480894.4890225-UTR-H-paniculata_contig20088:441..500Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig20088 442..500 +
1622929515.4402018-UTR-H-paniculata_contig20088:1550..22351622929515.4402018-UTR-H-paniculata_contig20088:1550..2235Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig20088 1551..2235 +
1691480894.5092833-UTR-H-paniculata_contig20088:1550..22351691480894.5092833-UTR-H-paniculata_contig20088:1550..2235Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig20088 1551..2235 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929515.4293118-CDS-H-paniculata_contig20088:500..15501622929515.4293118-CDS-H-paniculata_contig20088:500..1550Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20088 501..1550 +
1691480894.500466-CDS-H-paniculata_contig20088:500..15501691480894.500466-CDS-H-paniculata_contig20088:500..1550Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20088 501..1550 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig20088.5170.1

>prot_H-paniculata_contig20088.5170.1 ID=prot_H-paniculata_contig20088.5170.1|Name=mRNA_H-paniculata_contig20088.5170.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=350bp
MRMLPLTPLPGAALLCAIISLLISGVRGIELSTRKAKDNEIPSNSNVTML
ASAKNEVDTRCWIFSHLQKCGGSTVKEMIVHRWGEDFQIFDNNHWKRGDA
FSARYSEILLSGKRWHVSGGGYTEGLRRHVGDRCTWFTMFRHPVPRLVSA
YFYCKGVPTDAACASERVDAKDVDLLTFAKHWGNFALRQFVLSRIDVDDF
INDSLAQGFHQRSDGLLQDSGWYMLKKYLKRGIYGSEEEVLPDRALYDML
RPVLELIENNYTAVGLLENFHESLELFNRALGMPALDWHESFSQYSIMKQ
EKEFAAQEKKVLASAWTNAEIKQYIALDLVLYDHAVAVFNKQKKKYGIL*
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mRNA from alignment at H-paniculata_contig20088:442..2235+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig20088.5170.1 ID=mRNA_H-paniculata_contig20088.5170.1|Name=mRNA_H-paniculata_contig20088.5170.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1794bp|location=Sequence derived from alignment at H-paniculata_contig20088:442..2235+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGATTCAACGGGTTGACTCCTCCGTCAACATTTTCCGGTGTCTCTACTT GAAGGACAAATGAGGATGTTACCGCTGACACCATTACCCGGCGCGGCTCT ATTGTGCGCCATTATCTCTCTGTTGATTAGCGGCGTGAGGGGTATTGAAC TGTCCACGAGAAAGGCTAAGGATAACGAGATACCTAGCAACAGCAATGTA ACCATGTTAGCCTCGGCGAAAAATGAGGTGGACACCCGATGCTGGATATT TTCGCATCTACAAAAATGCGGCGGATCGACGGTCAAGGAAATGATCGTTC ATCGGTGGGGGGAAGATTTTCAGATCTTTGACAACAATCACTGGAAGAGA GGAGATGCCTTCAGCGCACGTTATTCCGAAATACTGCTGAGTGGAAAAAG ATGGCATGTCAGTGGCGGGGGATACACGGAAGGCTTGAGGCGTCATGTGG GAGATCGATGCACGTGGTTCACCATGTTTCGACACCCTGTTCCAAGGCTG GTTTCGGCATATTTTTACTGTAAAGGGGTCCCAACAGACGCGGCATGTGC CTCTGAACGGGTGGATGCTAAAGATGTCGACCTTTTGACTTTCGCGAAGC ATTGGGGTAATTTCGCCCTGAGGCAGTTCGTGCTAAGTCGTATCGATGTC GACGATTTTATCAATGATTCGTTGGCCCAAGGCTTCCATCAGAGGAGCGA TGGATTGCTTCAGGATTCCGGGTGGTACATGCTGAAGAAGTACCTAAAAA GGGGTATCTATGGTAGCGAGGAGGAAGTATTGCCGGATAGAGCTCTGTAT GACATGCTCCGTCCGGTGCTCGAGTTGATCGAAAACAACTACACTGCTGT TGGTCTCTTGGAGAATTTCCATGAGTCTTTAGAACTGTTCAACCGTGCAC TGGGAATGCCGGCCCTCGACTGGCATGAATCGTTTAGTCAATATAGTATT ATGAAACAGGAGAAGGAGTTCGCTGCCCAAGAAAAAAAAGTGTTGGCTAG CGCCTGGACAAACGCAGAGATTAAGCAGTATATCGCACTTGACCTGGTTC TGTACGATCATGCTGTGGCCGTTTTCAACAAGCAGAAAAAAAAATACGGC ATATTATAGATTTTTGAGAGCTTTGTACCGGTGGTATCGAAGGAGTGTAG TAAAATGTCCTTTGACACCCTCTTGATCAGGGGGAAGGAAACATCACTTT GAAGCCAATGATGCTACCTAAAGTATCGGCTATTTTGAAGCGTACGAGGT AGATTGTCCCGAATGTATCTACATCCGCTACATACCACCTTCAGGTTCAT GAAGTCTTCAGTATGTTTAGCTTGGTAAAAAAGATACACGGACATCATTG AGTTGTGCATAAAGGGGTCCCTGCCATGCGTATCAACCACGCAACAGTAA CGACGGGACTGTGACGGGAACAGGATCACTAACGTTCATCACTGGACTGA CGCGCACGGTTGAGGGAAAGGACGGAGAAAACGATCGAGGAGCCCATAGA ACAGGCCGCCGGCCAACGCATGGTGTGGGCGGGGCACAAGAGGGGTTGTT TGGATGTGGAAGCAGCAGAAAAGGTTTTTACCTCAGCCTTCCGGGGGTTA AAAAAAAAGAAAAAAAGAGGGGTTGTTGCGTGTTGTGAGCAAACTATCTC TGCTGATGTAGGGGCAGATGAAGGCTTCTCGAATAGAACGAAAATTAGTG AGTCAGTACGGTTTTGTTCTGTTATTGTGAAAATTCTAAGAATCATTTGT TTGCCATACCTCGTCACGCCCTTCCGTCCGTGTTTGCGCACCGG
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Coding sequence (CDS) from alignment at H-paniculata_contig20088:442..2235+

>mRNA_H-paniculata_contig20088.5170.1 ID=mRNA_H-paniculata_contig20088.5170.1|Name=mRNA_H-paniculata_contig20088.5170.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2100bp|location=Sequence derived from alignment at H-paniculata_contig20088:442..2235+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGGATGTTACCGCTGACACCATTACCCGGCGCGGCTCTATTGTGCGC
CATTATCTCTCTGTTGATTAGCGGCGTGAGGGGTATTGAACTGTCCACGA
GAAAGGCTAAGGATAACGAGATACCTAGCAACAGCAATGTAACCATGTTA
GCCTCGGCGAAAAATGAGGTGGACACCCGATGCTGGATATTTTCGCATCT
ACAAAAATGCGGCGGATCGACGGTCAAGGAAATGATCGTTCATCGGTGGG
GGGAAGATTTTCAGATCTTTGACAACAATCACTGGAAGAGAGGAGATGCC
TTCAGCGCACGTTATTCCGAAATACTGCTGAGTGGAAAAAGATGGCATGT
CAGTGGCGGGGGATACACGGAAGGCTTGAGGCGTCATGTGGGAGATCGAT
GCACGTGGTTCACCATGTTTCGACACCCTGTTCCAAGGCTGGTTTCGGCA
TATTTTTACTGTAAAGGGGTCCCAACAGACGCGGCATGTGCCTCTGAACG
GGTGGATGCTAAAGATGTCGACCTTTTGACTTTCGCGAAGCATTGGGGTA
ATTTCGCCCTGAGGCAGTTCGTGCTAAGTCGTATCGATGTCGACGATTTT
ATCAATGATTCGTTGGCCCAAGGCTTCCATCAGAGGAGCGATGGATTGCT
TCAGGATTCCGGGTGGTACATGCTGAAGAAGTACCTAAAAAGGGGTATCT
ATGGTAGCGAGGAGGAAGTATTGCCGGATAGAGCTCTGTATGACATGCTC
CGTCCGGTGCTCGAGTTGATCGAAAACAACTACACTGCTGTTGGTCTCTT
GGAGAATTTCCATGAGTCTTTAGAACTGTTCAACCGTGCACTGGGAATGC
CGGCCCTCGACTGGCATGAATCGTTTAGTCAATATAGTATTATGAAACAG
GAGAAGGAGTTCGCTGCCCAAGAAAAAAAAGTGTTGGCTAGCGCCTGGAC
AAACGCAGAGATTAAGCAGTATATCGCACTTGACCTGGTTCTGTACGATC
ATGCTGTGGCCGTTTTCAACAAGCAGAAAAAAAAATACGGCATATTATAG
ATGAGGATGTTACCGCTGACACCATTACCCGGCGCGGCTCTATTGTGCGC
CATTATCTCTCTGTTGATTAGCGGCGTGAGGGGTATTGAACTGTCCACGA
GAAAGGCTAAGGATAACGAGATACCTAGCAACAGCAATGTAACCATGTTA
GCCTCGGCGAAAAATGAGGTGGACACCCGATGCTGGATATTTTCGCATCT
ACAAAAATGCGGCGGATCGACGGTCAAGGAAATGATCGTTCATCGGTGGG
GGGAAGATTTTCAGATCTTTGACAACAATCACTGGAAGAGAGGAGATGCC
TTCAGCGCACGTTATTCCGAAATACTGCTGAGTGGAAAAAGATGGCATGT
CAGTGGCGGGGGATACACGGAAGGCTTGAGGCGTCATGTGGGAGATCGAT
GCACGTGGTTCACCATGTTTCGACACCCTGTTCCAAGGCTGGTTTCGGCA
TATTTTTACTGTAAAGGGGTCCCAACAGACGCGGCATGTGCCTCTGAACG
GGTGGATGCTAAAGATGTCGACCTTTTGACTTTCGCGAAGCATTGGGGTA
ATTTCGCCCTGAGGCAGTTCGTGCTAAGTCGTATCGATGTCGACGATTTT
ATCAATGATTCGTTGGCCCAAGGCTTCCATCAGAGGAGCGATGGATTGCT
TCAGGATTCCGGGTGGTACATGCTGAAGAAGTACCTAAAAAGGGGTATCT
ATGGTAGCGAGGAGGAAGTATTGCCGGATAGAGCTCTGTATGACATGCTC
CGTCCGGTGCTCGAGTTGATCGAAAACAACTACACTGCTGTTGGTCTCTT
GGAGAATTTCCATGAGTCTTTAGAACTGTTCAACCGTGCACTGGGAATGC
CGGCCCTCGACTGGCATGAATCGTTTAGTCAATATAGTATTATGAAACAG
GAGAAGGAGTTCGCTGCCCAAGAAAAAAAAGTGTTGGCTAGCGCCTGGAC
AAACGCAGAGATTAAGCAGTATATCGCACTTGACCTGGTTCTGTACGATC
ATGCTGTGGCCGTTTTCAACAAGCAGAAAAAAAAATACGGCATATTATAG
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