prot_H-paniculata_contig20043.5153.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig20043.5153.1
Unique Name	prot_H-paniculata_contig20043.5153.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	176

Homology

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BLAST of mRNA_H-paniculata_contig20043.5153.1 vs. uniprot
Match: A0A6H5L2M1_9PHAE (Isoleucine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2M1_9PHAE)

HSP 1 Score: 316 bits (810), Expect = 1.490e-98
Identity = 152/176 (86.36%), Postives = 163/176 (92.61%), Query Frame = 0

Query:    1 RKLVVATDLVETVSAKVGLEEGDTLKVLATLPGKDLVGTRYQHPLCERISEVVVGGDYITTEAGTGLVHTAPGHGQEDYVTGLKYGLPLLSPVDDAGKFTAEAGERFAGLSVLKEGNEEVLTALGEAGGLLAKEAYSHKYPYDWRTKKPTIFRATDQWFASVDRFRDTALDAINKV 176
            RKL+VATDLV  VSAK+GLEEGDTLKV+ T  GKDL+GT+YQHPLC+R+SEVV+GGDYITTE GTGLVHTAPGHGQEDYVTG KYGLPLLSPVDDAGKFTAEAG+RF GL+VLKEGNEEVL AL EAGGLLA+EAY HKYPYDWRTKKPTIFRATDQWFASVDRFRDTAL AI KV
Sbjct:  375 RKLLVATDLVGAVSAKIGLEEGDTLKVVETFTGKDLIGTKYQHPLCDRVSEVVIGGDYITTETGTGLVHTAPGHGQEDYVTGQKYGLPLLSPVDDAGKFTAEAGDRFKGLNVLKEGNEEVLVALEEAGGLLAREAYQHKYPYDWRTKKPTIFRATDQWFASVDRFRDTALSAIEKV 550

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BLAST of mRNA_H-paniculata_contig20043.5153.1 vs. uniprot
Match: A0A7S2XYB8_9STRA (Isoleucine--tRNA ligase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYB8_9STRA)

HSP 1 Score: 272 bits (695), Expect = 2.980e-88
Identity = 133/176 (75.57%), Postives = 151/176 (85.80%), Query Frame = 0

Query:    1 RKLVVATDLVETVSAKVGLEEGDTLKVLATLPGKDLVGTRYQHPLCERISEVVVGGDYITTEAGTGLVHTAPGHGQEDYVTGLKYGLPLLSPVDDAGKFTAEAGERFAGLSVLKEGNEEVLTALGEAGGLLAKEAYSHKYPYDWRTKKPTIFRATDQWFASVDRFRDTALDAINKV 176
            ++++VA  LV+T+SAK+GLEEG  L+V  TL GKDL GT+Y H +CER SEVV+GGDYITT++GTGLVHTAPGHGQEDY TGLKYGLPLLSPVDDAGKFTAEAGERF GLSVL +GN EV+ AL E G LL  E Y+HKYPYDWRTKKPTIFRATDQWFASVD FRD A+ AI+KV
Sbjct:   94 QRMLVAKGLVDTMSAKLGLEEGQGLEVEGTLLGKDLAGTKYFHSVCERESEVVIGGDYITTDSGTGLVHTAPGHGQEDYQTGLKYGLPLLSPVDDAGKFTAEAGERFQGLSVLGDGNTEVIAALEEKGSLLLGEDYNHKYPYDWRTKKPTIFRATDQWFASVDSFRDDAMAAIDKV 269

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BLAST of mRNA_H-paniculata_contig20043.5153.1 vs. uniprot
Match: A0A7S4ERA1_9STRA (Isoleucine--tRNA ligase n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A7S4ERA1_9STRA)

HSP 1 Score: 263 bits (672), Expect = 4.540e-79
Identity = 126/175 (72.00%), Postives = 149/175 (85.14%), Query Frame = 0

Query:    2 KLVVATDLVETVSAKVGLEEGDTLKVLATLPGKDLVGTRYQHPLCERISEVVVGGDYITTEAGTGLVHTAPGHGQEDYVTGLKYGLPLLSPVDDAGKFTAEAGERFAGLSVLKEGNEEVLTALGEAGGLLAKEAYSHKYPYDWRTKKPTIFRATDQWFASVDRFRDTALDAINKV 176
            KLVVATDLVET+++KVGL EG++ +++ATLPG DLVGT Y HPL +R S V+ GGDYITTE+GTGLVHTAPGHGQEDY+TGLK GL LLSPVDD+G+FT EAGE F GL+VLKEGN+ ++ AL   G LL  E Y HKYPYDWRTKKPTIFRATDQWFASV+ FRD+AL+A++ V
Sbjct:  328 KLVVATDLVETIASKVGLPEGESFEIVATLPGSDLVGTMYTHPLYDRNSPVLEGGDYITTESGTGLVHTAPGHGQEDYLTGLKNGLELLSPVDDSGRFTIEAGEEFKGLNVLKEGNQAMIDALTAKGALLKVEDYGHKYPYDWRTKKPTIFRATDQWFASVEGFRDSALEAVDTV 502

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BLAST of mRNA_H-paniculata_contig20043.5153.1 vs. uniprot
Match: A0A7S0LI09_9EUKA (Isoleucine--tRNA ligase (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LI09_9EUKA)

HSP 1 Score: 260 bits (665), Expect = 3.210e-78
Identity = 127/175 (72.57%), Postives = 143/175 (81.71%), Query Frame = 0

Query:    2 KLVVATDLVETVSAKVGLEEGDTLKVLATLPGKDLVGTRYQHPLCERISEVVVGGDYITTEAGTGLVHTAPGHGQEDYVTGLKYGLPLLSPVDDAGKFTAEAGERFAGLSVLKEGNEEVLTALGEAGGLLAKEAYSHKYPYDWRTKKPTIFRATDQWFASVDRFRDTALDAINKV 176
            KLVVA+DLV +V+ ++ L EG+ L  +A L G DL  + Y+HPL ER S+VV+GGDYITTE+GTGLVHTAPGHGQEDY+TG KYGLPLLSPVDDAGKFT EAGE F GLSVL +GN  V+TAL EAG LLA E Y+HKYPYDWRTKKPTIFRAT QWFASVD FRD AL AI  V
Sbjct:  314 KLVVASDLVSSVAGRLSLPEGEELSTIAVLSGADLEKSVYKHPLYERTSQVVIGGDYITTESGTGLVHTAPGHGQEDYITGQKYGLPLLSPVDDAGKFTTEAGEPFVGLSVLGDGNTAVITALQEAGALLASEGYAHKYPYDWRTKKPTIFRATSQWFASVDAFRDDALSAIESV 488

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BLAST of mRNA_H-paniculata_contig20043.5153.1 vs. uniprot
Match: A0A7S2A607_TRICV (Isoleucine--tRNA ligase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A607_TRICV)

HSP 1 Score: 255 bits (651), Expect = 7.900e-78
Identity = 122/175 (69.71%), Postives = 142/175 (81.14%), Query Frame = 0

Query:    2 KLVVATDLVETVSAKVGLEEGDTLKVLATLPGKDLVGTRYQHPLCERISEVVVGGDYITTEAGTGLVHTAPGHGQEDYVTGLKYGLPLLSPVDDAGKFTAEAGERFAGLSVLKEGNEEVLTALGEAGGLLAKEAYSHKYPYDWRTKKPTIFRATDQWFASVDRFRDTALDAINKV 176
            +L+VATDL E +++K  L EG+T  +LAT+PG D+VGT Y HPL  R S V+ GGDYITTE+GTGLVHTAPGHGQEDY+TGLK+GL LLSPV+DAG+FT EAGE F G+SVL EGN  V+ AL E G LL  E Y HKYPYDWRTKKPTIFRATDQWFASV+ FRD ALDA++ V
Sbjct:   25 RLLVATDLAENLASKFNLPEGETFTILATMPGSDVVGTTYNHPLYPRTSPVLAGGDYITTESGTGLVHTAPGHGQEDYLTGLKHGLDLLSPVNDAGQFTKEAGEMFEGMSVLGEGNTAVVDALAETGSLLLAEDYGHKYPYDWRTKKPTIFRATDQWFASVEGFRDEALDAVDTV 199

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BLAST of mRNA_H-paniculata_contig20043.5153.1 vs. uniprot
Match: A0A7S1ZYZ0_9STRA (Isoleucine--tRNA ligase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZYZ0_9STRA)

HSP 1 Score: 259 bits (662), Expect = 1.330e-77
Identity = 124/175 (70.86%), Postives = 145/175 (82.86%), Query Frame = 0

Query:    2 KLVVATDLVETVSAKVGLEEGDTLKVLATLPGKDLVGTRYQHPLCERISEVVVGGDYITTEAGTGLVHTAPGHGQEDYVTGLKYGLPLLSPVDDAGKFTAEAGERFAGLSVLKEGNEEVLTALGEAGGLLAKEAYSHKYPYDWRTKKPTIFRATDQWFASVDRFRDTALDAINKV 176
            +L+VA DL E+++ K  L EG+ L +LAT+ G +++GT Y HPL +R S V+ GGDYITTE+GTGLVHTAPGHGQEDY+TGLK GL LLSPVDD G+FT EAGERFAG++VLKEGNEEV+TAL E G LL  E Y HKYPYDWRTKKPTIFRATDQWFASV+ FRD ALDAI+ V
Sbjct:  342 RLLVAADLAESLATKFELPEGEKLSILATMKGSEIIGTTYSHPLYDRKSPVLAGGDYITTESGTGLVHTAPGHGQEDYLTGLKAGLDLLSPVDDLGRFTIEAGERFAGMNVLKEGNEEVVTALQETGSLLRAEDYGHKYPYDWRTKKPTIFRATDQWFASVEGFRDAALDAIDTV 516

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BLAST of mRNA_H-paniculata_contig20043.5153.1 vs. uniprot
Match: A0A1Z5JP77_FISSO (Isoleucine--tRNA ligase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JP77_FISSO)

HSP 1 Score: 254 bits (650), Expect = 5.360e-76
Identity = 124/175 (70.86%), Postives = 139/175 (79.43%), Query Frame = 0

Query:    2 KLVVATDLVETVSAKVGLEEGDTLKVLATLPGKDLVGTRYQHPLCERISEVVVGGDYITTEAGTGLVHTAPGHGQEDYVTGLKYGLPLLSPVDDAGKFTAEAGERFAGLSVLKEGNEEVLTALGEAGGLLAKEAYSHKYPYDWRTKKPTIFRATDQWFASVDRFRDTALDAINKV 176
            KL+VATDL ET++ K  L EG+   V  T  G DLVGT YQHPL ER S V+ GGDYITTE+GTGLVHTAPGHGQEDY+TGLK GL +LSPVDD GKFTA+AGE+F GLSVL EGN+ ++ AL E G LL  E Y HKYPYDWRTKKPTIFRATDQWFASV  FRD+AL AI+ V
Sbjct:  318 KLLVATDLAETLAKKFALPEGEVFDVRGTFQGSDLVGTTYQHPLYERRSPVLAGGDYITTESGTGLVHTAPGHGQEDYLTGLKNGLEILSPVDDVGKFTADAGEKFVGLSVLAEGNQAIIDALAETGALLKAEDYGHKYPYDWRTKKPTIFRATDQWFASVQGFRDSALKAIDTV 492

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BLAST of mRNA_H-paniculata_contig20043.5153.1 vs. uniprot
Match: A0A7S3HPS4_9STRA (Isoleucine--tRNA ligase (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HPS4_9STRA)

HSP 1 Score: 253 bits (645), Expect = 1.620e-75
Identity = 122/175 (69.71%), Postives = 145/175 (82.86%), Query Frame = 0

Query:    4 VVATDLVETVSAKVGLE--EGDTLKVLATLPGKDLVGTRYQHPLCERISEVVVGGDYITTEAGTGLVHTAPGHGQEDYVTGLKYGLPLLSPVDDAGKFTAEAGERFAGLSVLKEGNEEVLTALGEAGGLLAKEAYSHKYPYDWRTKKPTIFRATDQWFASVDRFRDTALDAINKV 176
            +V   LVE++SAK+GL+  EG  L++   L G+DLVG++YQHPLCER+SEVV+GGDYI  E+GTGLVHTAPGHGQEDY+TGLKY LPLLSPV+D GKFT EAGERF GL VLKEGN  V+ AL EAG L+ +E YSHKYPYDWR+KKPTIFRAT+QWFASV  FR+  L AI++V
Sbjct:  331 LVGLPLVESLSAKLGLDIKEGHKLQISTVLKGEDLVGSKYQHPLCERVSEVVLGGDYINMESGTGLVHTAPGHGQEDYLTGLKYNLPLLSPVNDLGKFTVEAGERFVGLDVLKEGNVAVIKALEEAGVLIKEEPYSHKYPYDWRSKKPTIFRATEQWFASVSTFREATLQAIDQV 505

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BLAST of mRNA_H-paniculata_contig20043.5153.1 vs. uniprot
Match: B7FRF4_PHATC (Isoleucine--tRNA ligase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FRF4_PHATC)

HSP 1 Score: 253 bits (646), Expect = 2.210e-75
Identity = 123/175 (70.29%), Postives = 141/175 (80.57%), Query Frame = 0

Query:    2 KLVVATDLVETVSAKVGLEEGDTLKVLATLPGKDLVGTRYQHPLCERISEVVVGGDYITTEAGTGLVHTAPGHGQEDYVTGLKYGLPLLSPVDDAGKFTAEAGERFAGLSVLKEGNEEVLTALGEAGGLLAKEAYSHKYPYDWRTKKPTIFRATDQWFASVDRFRDTALDAINKV 176
            KL+VATDL  +++ K  L E +TL +LAT PGKDLVGT Y+HP+ +R S V+ GGDYITTE+GTGLVHTAPGHGQEDY+TGLK GL +LSPVDD GKFT EAGER+ G+ VL EGN  ++ AL EAG LL  E Y HKYPYDWRTKKPTIFRATDQWFASV  FRD ALDA+ KV
Sbjct:  330 KLLVATDLASSLARKFDLPEDETLDILATFPGKDLVGTIYKHPMYDRKSPVLAGGDYITTESGTGLVHTAPGHGQEDYLTGLKNGLEILSPVDDVGKFTIEAGERYVGMRVLAEGNLAMIDALQEAGSLLKAEDYGHKYPYDWRTKKPTIFRATDQWFASVAGFRDQALDAVEKV 504

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BLAST of mRNA_H-paniculata_contig20043.5153.1 vs. uniprot
Match: A0A7S0M4Z3_9CRYP (Isoleucine--tRNA ligase (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M4Z3_9CRYP)

HSP 1 Score: 243 bits (620), Expect = 3.930e-75
Identity = 122/178 (68.54%), Postives = 139/178 (78.09%), Query Frame = 0

Query:    1 RKLVVATDLVETVSAKVGL--EEGDTLKVLATLPGKDLVGTRYQHPLCERISEVVVGGDYITTEAGTGLVHTAPGHGQEDYVTGLKYGLPLLSPVDDAGKFTAEAGERFAGLSVLKEGNEEVLTALGEAGGLLAKEAYSHKYPYDWRTKKPTIFRATDQWFASVDRFRDTALDAINKV 176
            R LVVA DLVE V +K+    EEG  L+VL TL G +L GTRY+HPL +R   VVVGGDYITTE GTGLVHTAPGHG EDY TGLKYGL LLSPVDDAG+FTAEAG    G  VL +GN+ VL  +G+AG LL +EAY HKYPYDWRTKKPTIFRATDQWFASV+ FR  A++A++ V
Sbjct:   30 RLLVVAKDLVEAVGSKMAAPGEEGAGLRVLGTLTGAELAGTRYKHPLYDREGPVVVGGDYITTETGTGLVHTAPGHGVEDYQTGLKYGLALLSPVDDAGRFTAEAGPALEGKDVLADGNQAVLELMGQAGALLKEEAYGHKYPYDWRTKKPTIFRATDQWFASVESFRKQAVEAVDGV 207

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig20043.5153.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig20043.5153.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L2M1_9PHAE	1.490e-98	86.36	Isoleucine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A7S2XYB8_9STRA	2.980e-88	75.57	Isoleucine--tRNA ligase (Fragment) n=1 Tax=Fibroca...	[more]
A0A7S4ERA1_9STRA	4.540e-79	72.00	Isoleucine--tRNA ligase n=2 Tax=Pseudo-nitzschia T...	[more]
A0A7S0LI09_9EUKA	3.210e-78	72.57	Isoleucine--tRNA ligase (Fragment) n=1 Tax=Coccoli...	[more]
A0A7S2A607_TRICV	7.900e-78	69.71	Isoleucine--tRNA ligase n=1 Tax=Trieres chinensis ...	[more]
A0A7S1ZYZ0_9STRA	1.330e-77	70.86	Isoleucine--tRNA ligase n=1 Tax=Ditylum brightwell...	[more]
A0A1Z5JP77_FISSO	5.360e-76	70.86	Isoleucine--tRNA ligase n=2 Tax=Fistulifera solari...	[more]
A0A7S3HPS4_9STRA	1.620e-75	69.71	Isoleucine--tRNA ligase (Fragment) n=1 Tax=Spumell...	[more]
B7FRF4_PHATC	2.210e-75	70.29	Isoleucine--tRNA ligase n=2 Tax=Phaeodactylum tric...	[more]
A0A7S0M4Z3_9CRYP	3.930e-75	68.54	Isoleucine--tRNA ligase (Fragment) n=1 Tax=Cryptom...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002300	Aminoacyl-tRNA synthetase, class Ia	PFAM	PF00133	tRNA-synt_1	coord: 2..176 e-value: 2.8E-43 score: 148.1
IPR009008	Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain	GENE3D	3.90.740.10		coord: 2..145 e-value: 5.3E-55 score: 188.8
IPR009008	Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain	SUPERFAMILY	50677	ValRS/IleRS/LeuRS editing domain	coord: 2..140
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620		coord: 146..176 e-value: 5.3E-55 score: 188.8
None	No IPR available	PANTHER	PTHR42765:SF3		coord: 3..176
None	No IPR available	PANTHER	PTHR42765	FAMILY NOT NAMED	coord: 3..176
None	No IPR available	SUPERFAMILY	52374	Nucleotidylyl transferase	coord: 140..175

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig20043	contig	H-paniculata_contig20043:313..3875 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig20043.5153.1	mRNA_H-paniculata_contig20043.5153.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig20043 313..3875 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig20043.5153.1 ID=prot_H-paniculata_contig20043.5153.1|Name=mRNA_H-paniculata_contig20043.5153.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=176bp
RKLVVATDLVETVSAKVGLEEGDTLKVLATLPGKDLVGTRYQHPLCERIS
EVVVGGDYITTEAGTGLVHTAPGHGQEDYVTGLKYGLPLLSPVDDAGKFT
AEAGERFAGLSVLKEGNEEVLTALGEAGGLLAKEAYSHKYPYDWRTKKPT
IFRATDQWFASVDRFRDTALDAINKV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002300	aa-tRNA-synth_Ia
IPR009008	Val/Leu/Ile-tRNA-synth_edit
IPR014729	Rossmann-like_a/b/a_fold