prot_H-paniculata_contig200.5129.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig200.5129.1 vs. uniprot
Match: D8LND0_ECTSI (Replication factor C subunit 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LND0_ECTSI) HSP 1 Score: 976 bits (2523), Expect = 0.000e+0 Identity = 519/725 (71.59%), Postives = 573/725 (79.03%), Query Frame = 0
Query: 2 GGSRQAPPNEGNKEVPKGADQCLSGKTFVVSGVLDSLGREAAEDLIKEYGGKVTGSVSSKTAFLLLGSVLDDGRPPEEGSKYKKAQQHKTKIIDEDGLFKMLRDSNPGGRGSSASSTPTAASAATGASKKPGVANPYA-KAAVANPYGSFTAKXXXXXXXXXXXXXXGAESGGAKSPAKVSRNGKGSS------------SSSTPSVLNKPGQMWVDKHKPQATKDIIGHTGQVTKLQTWLRNWENWHLKANGPKPPQGKDNPGARAALLSGVPGVGKSSTATLVAKEMGYHVFELNASDTRNKSSLSVELASVIGNQCLNFTAEGRSRSSXXXXXXXXXXXXXXXXXXXXXKKQLVVMDEVDGMGGSDRGGIQELIALIKKAKVPIIAICNDRQHQKIRSLVNHCYDLRFQRPQKATIAKRVKAIAKMEGMDVDDNAAEMLVEANGNDIRQVLHALQMWSRKSSKLSYMNLKGGLAAIEKDKVQRCGPFEAARSILGG-ERTPLKERYEAFFTDYSLLPLLVHQNYPSSLMKIDPSTRTDVTMRAAAACSDADIISGKMRGDVQHWELLPAQAALNVRVGSIGAGSLGFPEFPKWLGNYSRENKRRRLLGELSTHLNASVSGGPEAVRLSYVHFLKTVLTRPLRERGAEGAQECVDMLEEYGLSRDDLFEIMPEFQLSSTGMKHPPPDVFGCLDGKTKSAVTRCYNSISHKSQALVEAMQAPKK 712
GG+R APPNEG KEVP G +QCL+GK FVVSGVLDSLGREAAEDLIK+YGGKVTG+VSS+T FL+LG+VLDDGRPPEEGSKYK+A KT+IIDEDGLFKMLRDSNP G+ + KP VANPY K AV NPY S A A G K A ++ G+S + + +V PGQMWVDK+KP ++ +IGH GQV KL+ WL+NWE WHLK G K P GKDNPGARAALLSGVPGVGKSSTATLVA+EMGYHV ELNASDTR+K SLS ELASVIGN+ L+FTA G XXX +KQLVVMDEVDGMGGSDRGGIQELI LIKK++VPIIAICNDRQHQKIRSLVNHCYDLRF RPQK TIAKRVKA+AKMEGMDVDDNAAEMLVEANGNDIRQVLHALQMWSRKSSK++YMNLKGG++AIEKDK QR GPF+AARSILGG RTPL++RYE FFTDYSLLPLLVHQNY SSLM++D RT+VT A+AA SDADIISGKMRGDVQHWELLPAQAALNVRVGS+G GSLGFPEFPKWLGNYSRENKRRRLLGELSTHLNASVSGG EAVRLSY+HFLK +LT+PLRE GA GA CVD+LEEYGLSRDDLFE++PEF LS GMK PPPD+FG LD KT+SAVTRCYNS +HKSQAL A+QAPKK
Sbjct: 235 GGARLAPPNEGKKEVPVGKEQCLAGKAFVVSGVLDSLGREAAEDLIKQYGGKVTGAVSSRTHFLVLGTVLDDGRPPEEGSKYKRAMVMKTRIIDEDGLFKMLRDSNPKGQQPPGXXXXXXXXXXXAPASKPAVANPYQPKKAVVNPYASMQAAAKKKAAVNPFGA---AVIAGGKGKAPAGKSPAGTSXXXXXXXXXXXGARAAAAVRQNPGQMWVDKYKPTSSSGVIGHAGQVKKLKVWLQNWEGWHLK--GAKAPTGKDNPGARAALLSGVPGVGKSSTATLVAREMGYHVMELNASDTRSKRSLSEELASVIGNKVLSFTANGXXXXXXXXGF----------------RKQLVVMDEVDGMGGSDRGGIQELILLIKKSRVPIIAICNDRQHQKIRSLVNHCYDLRFARPQKVTIAKRVKAVAKMEGMDVDDNAAEMLVEANGNDIRQVLHALQMWSRKSSKMTYMNLKGGISAIEKDKNQRIGPFDAARSILGGASRTPLRDRYELFFTDYSLLPLLVHQNYLSSLMQVDAKVRTEVTAAASAAVSDADIISGKMRGDVQHWELLPAQAALNVRVGSVGGGSLGFPEFPKWLGNYSRENKRRRLLGELSTHLNASVSGGTEAVRLSYIHFLKRLLTQPLREEGAAGAPACVDLLEEYGLSRDDLFEVLPEFVLSGKGMKRPPPDLFGSLDSKTRSAVTRCYNSQAHKSQALAVALQAPKK 938
BLAST of mRNA_H-paniculata_contig200.5129.1 vs. uniprot
Match: A0A1Z5JWY4_FISSO (Replication factor C subunit 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JWY4_FISSO) HSP 1 Score: 448 bits (1152), Expect = 3.830e-141 Identity = 291/724 (40.19%), Postives = 402/724 (55.52%), Query Frame = 0
Query: 28 TFVVSGVLDSLGREAAEDLIKEYGGKVTGSVSSKTAFLLLGSVLDDGRPPEEGSKYKKAQQHKTKIIDED-----GLFKMLRD---------------SNPGGRGSSASSTPTAASAATGASKKPGVANPYAKAAVANPYGSFTAKXXXXXXXXXXXXXXGAESGGAKSPAKVSRNGKGSSSSSTPSVLNKPGQMWVDKHKPQATKDIIGHTGQVTKLQTWLRNWEN-WHLKANGPKPPQGKDNPGARAALLSGVPGVGKSSTATLVAKEMGYHVFELNASDTRNKSSLSVELASVIGNQCLNFTAEGRSRSSXXXXXXXXXXXXXXXXXXXXXKKQLVVMDEVDGMGGSDRGGIQELIALIKKAKVPIIAICNDRQHQKIRSLVNHCYDLRFQRPQKATIAKRVKAIAKMEGMDVDDNAAEMLVEANGNDIRQVLHALQMWSRKSSKLSYMNLKGGLAAIEKDKVQRCGPFEAARSILGGER-----TPLKER------YEAFFTDYSLLPLLVHQNYPSSLM-------KIDPSTRTDVTMR---AAAACSDADIISGKMRGDVQHWELLPAQAALNVRVGSIGAGSLG-----FPEFPKWLGNYSRENKRRRLLGELSTHLNASVSGGPEAVRLSYVHFLKTVLTRPLRERGAEGAQECVDMLEEYGLSRDDLFEIMPEFQLSSTGMKHPPPDVFGCLDGKTKSAVTRCYNSISHKSQALV 704
TF SGVL+ L R+AA+DL+K GG+VT +VSSKT +L++G+VL+DGR ++GSKYKKA + K+ +I GL + D S P S+ ST TAA+ +KK +NPYA A AN YG A PA S ++ + P + + +WVDK+KP + ++I+G+ V KL WL +WE ++ N K + P +AALLSG PG+GK++TATLVAKE G V E NASD R+K +L+ + G+Q ++FT + KK+ ++MDEVDGMG DR G+ ELI +IKK+KVPI+ ICNDRQ QK++SL+ +C DLR++RP K IA R + + EG++V+ NAAE L E+ GNDIRQVL+ LQMWSRK + L + +LK I KD + R F+AA+ +L G + TP +ER ++AFF DY LLV QNY L + + +++ +V R AA A SD D+ ++RG Q+W LLP ++L V+ G +G G FPEF WLG S + K+ RLL EL HLN S+SGG RLSY+ L+T L + L+ A+ AQ +D ++EYGL RDD+FE + EF LSS+ F L K K++ TR YN +H SQALV
Sbjct: 195 TFCFSGVLEQLSRDAAQDLVKTLGGRVTTAVSSKTDYLVVGNVLEDGRDYQQGSKYKKAMELKSVVIVRGEELFYGLLQTYHDLCGPVVAPAVASTLVSAPPSVPSNPYSTATAATKVNPYAKK--ASNPYAATAKANSYGRKAA------------------------PAMTSVTSNTTTMAVAPVLGDTSSMLWVDKYKPTSAREILGNQDAVKKLTQWLNSWERIFNTTQNSNKTFSAPNGPW-KAALLSGPPGIGKTTTATLVAKEAGRDVLEFNASDVRSKKALTNVFGDITGSQTIDFTTQA--------------------------KKRCIIMDEVDGMGAGDRSGMAELIQMIKKSKVPIVCICNDRQSQKLKSLIPYCLDLRYRRPTKNVIANRAVQVGQQEGLNVEQNAAEALAESCGNDIRQVLNCLQMWSRKGNSLKFKDLKERANDINKDDILRVSLFDAAKQLLEGRQGLNGSTPEQERDSFFRRHDAFFVDYGFTGLLVQQNYLKVLQGPFGEAKRKNAASQLEVLHRMSDAAEALSDYDLAENQLRGG-QNWSLLPLCSSLIVKTGFHASGPNGGFLPGFPEFTSWLGRNSTKGKKYRLLSELQHHLNYSISGGGSETRLSYLPVLRTRLLQLLQ---ADDAQAAIDFMDEYGLDRDDVFEKLDEFMLSSSKAA-----TFNDLSSKKKASFTRLYNQTAHSSQALV 856
BLAST of mRNA_H-paniculata_contig200.5129.1 vs. uniprot
Match: A0A835YT94_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT94_9STRA) HSP 1 Score: 438 bits (1126), Expect = 2.420e-140 Identity = 266/643 (41.37%), Postives = 341/643 (53.03%), Query Frame = 0
Query: 195 VLNKPGQMWVDKHKPQATKDIIGHTGQVTKLQTWLRNWENWHLKANGPKPPQGK--DNPGARAALLSGVPGVGKSSTATLVAKEMGYHVFELNASDTRNKSSLSVELASVIGNQCLNFTAEGRSRSSXXXXXXXXXXXXXXXXXXXXXKKQLVVMDEVDGMGGSDRGG----------------IQELIALIKKAKVPIIAICNDRQHQKIRSLVNHCYDLRFQRPQKATIAKRVKAIAKMEGMDVDDNAAEMLVEANGNDIRQVLHALQMWSRKSSKLSYMNLKGGLAAIEKDKVQRCGPFEAARSILGGERTPLKERYEAFFTDYSLLPLLVHQNYPSSLMKIDPSTRTDVTMRAAAACSDADIISGKMRGDVQHWELLPAQAALNVRVGSIGAGSLGFPEFPKWLGNYSRENKRRRLLGELSTHLNASVSGGP--------------------EAVRLSYVH--------------------------------FLKTVLTRPLRERGAEGAQECVDMLEEYGLSRDDLFEIMPEFQLSST----------------GMKH------------------------PPP---------------DVFGCLDGKTKSAVTRCYNSISHKSQALVEAMQAPKK 712
V ++PGQ+W DK++PQ D++GHTG V KL WL N+E A +GK D+ RA L+SG PG+GK++ AT+VAK +G+ V E NASDTR+K S+ L V+ N L+F ++ S+ K++++MDEVDGMGG DRGG + ELI LI KVPII ICNDRQ KIRSLVNHC D+RF+RP K IAKR+K +A+ EG+D+D NAAEML E+ GNDIRQ LHA+QMWSR S ++YM +K GL A+ KDK QR F+ AR I + P ERYEAFFTDY L+PLLV QN+P ++ K + +T RAA A SDA++ +RGDV HWELLP AAL++RVG G +GFP FP+WLG S KRRRL+ E++TH+NA + P EAV L YV L V+T PLR GA+G E + ML+EYGLSRDDL E M + L T G+ H PP D G + K+A+TR YNS +H SQALV+ + APK+
Sbjct: 42 VSSEPGQLWADKYRPQKPSDLLGHTGDVRKLTEWLNNFEARAAPAVKGAKGKGKAGDDMHKRAVLISGPPGIGKTTAATIVAKSLGFEVTEFNASDTRSKKSMEEGLKDVLSNTVLSFGSKAGSKPP----------------------KRVIIMDEVDGMGGGDRGGRNVAEADVQMRLLARSMGELIKLIAITKVPIICICNDRQDTKIRSLVNHCIDMRFKRPVKTMIAKRMKEVAQKEGLDIDLNAAEMLSESVGNDIRQCLHAMQMWSRGSRTMAYMEVKDGLGAVSKDKSQRVSAFDGARMIFQTKSIPQAERYEAFFTDYGLVPLLVQQNWPDAIAKSNKATMMQRMARAADAISDAELAGSMVRGDVNHWELLPLYAALHLRVGLECDGYIGFPGFPQWLGKNSAATKRRRLVAEINTHMNARQARTPSPDNDHLPLESLLSLVNAEREAVWLDYVSSSVLSVRLIVIQSEREKRVXXXXXXXXXXXVPVLTRVITEPLRSAGADGVGEAMAMLDEYGLSRDDLLESMADLTLKGTRVFIVPIHTCAVRHALGVVHRQGANDFNLSSPIHAYLYMYIEVPKPPVPLAMRATLRRQGTRDYIGEVSTAAKTALTRAYNSTTHTSQALVDEISAPKR 662
BLAST of mRNA_H-paniculata_contig200.5129.1 vs. uniprot
Match: A0A7S4IHD5_9STRA (Replication factor C subunit 1 (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IHD5_9STRA) HSP 1 Score: 432 bits (1110), Expect = 6.080e-133 Identity = 328/800 (41.00%), Postives = 429/800 (53.62%), Query Frame = 0
Query: 22 QCLSGKTFVVSGVLD----SLGREAAEDLIKEYGGKVTGSVSSKTAFLLLGSVLDDGRPPEEGSKYKKAQQ---HKTKIIDED----GLFKMLRDS-NP---------GGRGSSASSTPTAASA-------------------------ATGASKKPGVANPYAKAAVA------------------NPY---GSFTAKXXXXXXXXXXXXXXGAESGGAKSPAKVSRNGKGSSSS---STPSVLNKPGQMWVDKHKPQATKDIIGHTGQVTKLQTWLRNWEN-WHLKANGPKPPQGKDNPGAR-AALLSGVPGVGKSSTATLVAKEMGYHVFELNASDTRNKSSLSVELASVIGNQCLNFTAEGRSRSSXXXXXXXXXXXXXXXXXXXXXKKQLVVMDEVDGMGGSDRGGIQELIALIKKAKVPIIAICNDRQHQKIRSLVNHCYDLRFQRPQKATIAKRVKAIAKMEGMDVDDNAAEMLVEANGNDIRQVLHALQMWSRK-----------SSKLSYMNLKGGLAAIEKDKVQRCGPFEAARSILGGER--TP----------LKERYEAFFTDYSLLPLLVHQNYPSSLMKIDPSTRTDVTM-----------RAAAACSDADIISGKMRGDVQHWELLPAQAALNVRVGSIGAGSLG-----FPEFPKWLGNYSRENKRRRLLGELSTHLNASVSGGPEAVRLSYVHFLKTV-LTRPLRERGAEGAQECVDMLEEYGLSRDDLFEIMPEFQLSSTGMKHPPPDVFGCLDGKTKSAVTRCYNSISHKSQALVEAMQA 709
+CLSG TFV +G+L + R+ AED +K GG+VT +VS KT +L+ G L+DGR EEGSKY+KA + K I+ + L KM+ + NP G TP A + G + P ANPYAK A NPY G+ XXXXXXXXXXXXXX G K PA NG GS++ + P +W DK+ P+ T+DI+G+ VTKL WL WE+ +++ ++G K N G + AALLSG PG+GK++TATLVA+E G V ELNASD R+K SL+ L V G+Q LNF + XXXXXXXX +K++++MDEVDGMG DR G+ ELIA+IKK+KVPII ICNDRQ QK+RSLV HC DLR++RP K IA+R + +MEGM V+ NAAE + E+ GND+RQVL+ LQMWS K ++ L+Y LK AI KD++ R F+A + I+ G R TP L +R +A+FTDY L+ L VHQNYP + +T+ + +AA + SD + +RG +W LLP + L V G G G FPEF WLG S K+RRLL EL HLN +VS +RL+YV L++ L + + G +E +DM++EYGL RDDLFE + EF L + G K F LD K K+A TR YN SH+SQALVE A
Sbjct: 352 ECLSGLTFVFTGILSCPILAGSRDEAEDYVKTLGGRVTKAVSGKTDYLVCGYELEDGRGVEEGSKYRKANELGGDKVGIVRDSTEFYALVKMIDERRNPNKKVEKRGEGEEKKEEDGTPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAGMASPPARANPYAKKGGASPAXXXXXRSGVGXXXXXNPYAAAGAXXXXXXXXXXXXXXXXXXXXXXXGKKPPAAA--NGAGSTADRGGGSGGSSGDPNALWADKYAPRTTQDILGNRDAVTKLTNWLNRWESTFNVPSSGGKKSFSNPNGGPKKAALLSGPPGIGKTTTATLVARESGRDVLELNASDARSKKSLTENLGDVTGSQVLNFAPSAKGGKGKGGXXXXXXXXPPRK------QKRVIIMDEVDGMGAGDRSGMSELIAMIKKSKVPIICICNDRQSQKVRSLVAHCLDLRYRRPVKTVIARRAVEVGRMEGMHVEPNAAEAIAESCGNDVRQVLNCLQMWSSKKRDGNSDAAAGNNDLTYKGLKDRRDAISKDEMLRVTMFDATKLIIEGRRGLTPDSDRKAQLDSLYKRSDAYFTDYGLMGLNVHQNYPKVMTSQFQATKKERDEEGELGVLERLGKAADSMSDFAVAEEAVRGGDGNWGLLPLCSILAVSTGYHAGGERGGFLPGFPEFAGWLGKNSSRGKKRRLLQELDRHLNFAVSADRTELRLNYVPALRSAFLDLMMNKEGGPRTREVIDMMDEYGLDRDDLFETLDEFTLDAKGKK------FADLDSKVKAAFTREYNKGSHRSQALVEEQGA 1137
BLAST of mRNA_H-paniculata_contig200.5129.1 vs. uniprot
Match: A0A7S2SF18_9STRA (Replication factor C subunit 1 n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SF18_9STRA) HSP 1 Score: 419 bits (1077), Expect = 3.800e-132 Identity = 263/690 (38.12%), Postives = 366/690 (53.04%), Query Frame = 0
Query: 24 LSGKTFVVSGVLDSL-GREAAEDLIKEYGGKVTGSVSSKTAFLLLG--SVLDDGRPPEEGSKYKKAQQHKTKIIDEDGLFKMLRDSNPGGRGSSASSTPTAASAATGASKKPGVANPYAKAAVANPYGSFTAKXXXXXXXXXXXXXXGAESGGAKSPAKVSRNGKGSSSSSTPSVLNKPGQMWVDKHKPQATKDIIGHTGQVTKLQTWLRNWENWHLKANGPKPPQGKDNPGARAALLSGVPGVGKSSTATLVAKEMGYHVFELNASDTRNKSSLSVELASVIGNQCLNFTAEGRSRSSXXXXXXXXXXXXXXXXXXXXXKKQLVVMDEVDGMGGSDRGGIQELIALIKKAKVPIIAICNDRQHQKIRSLVNHCYDLRFQRPQKATIAKRVKAIAKMEGMDVDDNAAEMLVEANGNDIRQVLHALQMWSRKSSKLSYMNLKGGLAAIEKDKVQRCGPFEAARSILG---GERTPLKERYEAFFTDYSLLPLLVHQNY---PSSLMKIDPSTRTDVTMRAAAACSDADIISGKMRGDVQHWELLPAQAALNVRVGSIGAGSLGFPEFPKWLGNYSRENKRRRLLGELSTHLNASVSGGPEAVRLSYVHFLKTVLTRPLRERGAEGAQECVDMLEEYGLSRDDLFEIMPEFQLSSTGMKHPPPDVFGCLDGKTKSAVTRCYNSISHKSQALV 704
L+ + FV +GVL RE A D +K +G VT VSSKT ++ G + L+D RP E+ KY+ A + I+DE+ K+L + + + +S +KP G E A++ K+ G S PS++ +WVDK+KP+ D+IG++ ++ L+ WL WE+ H+K GP PP K+NPG++ ALLSG PG+GKSS A +V++ GY V ELNASD R+K +S L + + L+ ++E K+LV+MDEVDGM DRGG+QELI L+KK KVPII ICNDRQ +R+L HCYDL+F RP + I ++ IA+ EGM ++ NA +LV + ND+RQVL LQMW R SSK+SY + K + KD + FEA ++I G+ T L ERY AFF +Y L+PL+V QNY +S D + AA A D+D++ ++RGD+ W LLP QA NV VGSI G +GFP FP+WLG S K+ RLL E + H+ + +RL Y+ L+ L +PL +D ++ YGL RDD+FE M E QLS P++F +D KTK+A TR +N H SQALV
Sbjct: 94 LTNRKFVFTGVLRKYPDREDAVDAVKRFGANVTTCVSSKTTDVVGGYQATLEDERPVEQTRKYRDAVEKGINILDEEAFLKLLEECDRKRKSASP--------------EKP-------------------------------MFEIGQEKAQAQAMPKLGDTGN--SKEENPSMM-----LWVDKYKPKVVGDLIGNSSKINALKNWLAKWESIHIKG-GPPPPFSKENPGSKVALLSGPPGIGKSSAAGIVSRAAGYDVMELNASDARSKKIISRVLGDALNCKSLSQSSE----------------------------KRLVIMDEVDGMSSDDRGGMQELIKLMKKTKVPIICICNDRQKSSVRTLAGHCYDLKFIRPTSSVIVRKASIIAEKEGMRLEPNALNILVASAQNDVRQVLGTLQMWKRGSSKISYDDAKRQQKTVGKDSEFKMSDFEACQAIFNQASGKET-LNERYGAFFINYDLMPLMVQQNYIGAANSAKGADEQEKLRRLSAAADAVCDSDLLQRRIRGDMS-WGLLPQQAMANVHVGSICKGFIGFPGFPEWLGKNSSRGKKSRLLSETAAHMRMKTNMNTRTLRLDYLCLLRDHLVKPLLTGDKGNVIRTIDSMDSYGLDRDDVFETMQELQLSG-------PNMFDRIDSKTKAAFTREFNKKIHTSQALV 693
BLAST of mRNA_H-paniculata_contig200.5129.1 vs. uniprot
Match: A0A812KXV0_9DINO (Replication factor C subunit 1 n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812KXV0_9DINO) HSP 1 Score: 421 bits (1082), Expect = 1.730e-131 Identity = 273/711 (38.40%), Postives = 368/711 (51.76%), Query Frame = 0
Query: 12 GNKEVPKGADQCLSGKTFVVSGVLDSLGREAAEDLIKEYGGKVTGSVSSKTAFLLLGSVLDDGRPPEEGSKYKKAQQHKTKIIDEDGLFKMLRDSNPGGRGSSASSTPTAASAATGASKKPGVANPYAKAAVANPYGSFTAKXXXXXXXXXXXXXXGAESGGAKSPAKVSRNGKGSSSSSTPSVLNKPGQMWVDKHKPQATKDIIGHTGQVTKLQTWLRNWENWHLKANGPKPP---QGKDNPGARAALLSGVPGVGKSSTATLVAKEMGYHVFELNASDTRNKSSLSVELASVIGNQCLNFTAEGRSRSSXXXXXXXXXXXXXXXXXXXXXKKQLVVMDEVDGMGGSDRGGIQELIALIKKAKVPIIAICNDRQHQKIRSLVNHCYDLRFQRPQKATIAKRVKAIAKMEGMDVDDNAAEMLVEANGNDIRQVLHALQMWSRK----SSKLSYMNLKGGLAAIEKDKVQRCGPFEAARSILGGERTP-LKERYEAFFTDYSLLPLLVHQNYPSSLMKIDPSTRTDVTMR---AAAACSDADIISG--KMRGDVQHWELLPAQAALNVRVGSIGAGSLGFPEFPKWLGNYSRENKRRRLLGELSTHLNASVSGGPEAVRLSYVHFLKTVLTRPLRERGAEGAQECVDMLEEYGLSRDDLFE---IMPEFQL---SSTGMKHPPPDVFGCLDGKTKSAVTRCYNSISHKSQAL 703
G VP CL G V+GV L RE D+IK YGG VTGSVS KT +LL G L+ G P +KY+ A++ + L P A A V GG+ A+ ++ +G+ + MWVD++KP + +D++G+ + +L WL++WE H+K PKP + NPGARA LLSG PG+GKS+ A LVA+ +GY V E+NASDTR+K SL LA V+GN+ + F A XXXXXXXX +Q+V+MDEVDGM DRGG ELI +IK + PII ICNDRQ +RSL N C DL+F RP K +AKR+ IA +G+ + NA E LVE +GNDIRQ +H LQMW+ +L++ +K A +KDK R F+ +++ R+ ERY +FF DY L+PLLV Q P S+ T R AA A + +D++S +MRG W LL + AA+NV+ +GS+ FP FP+W G S KRRRLLGELS HLN VSGG +++R+ Y+ LK+ P+ E+GA+G + + ML+ YGLS+ DL E P F L K D F + G KS +TR YN+ +H+SQAL
Sbjct: 177 GRSTVPSAKRLCLQGVALAVTGVFPQLDREEVCDIIKTYGGTVTGSVSGKTHYLLTGDALESGDPVSASAKYRAAKERGVPTLTLPAFLDFLA--------------------------------PRAVAKV----------------------------GGSMPMARPAQRQRGAEEA-----------MWVDRYKPASVEDLVGNKALIGRLVAWLKDWEAIHIKKTKPKPAFDARAGTNPGARAVLLSGPPGIGKSTAALLVARAVGYQVQEMNASDTRSKRSLKETLAEVVGNRAITFFARAPGGGXXXXXXXXXTA------------RQVVIMDEVDGMSSGDRGGNAELIRIIKTTRRPIICICNDRQKSSVRSLANSCLDLKFSRPNKQQVAKRLALIAAEQGLAAEPNALEYLVETSGNDIRQTVHMLQMWANSPHGADGRLTFAAMKAAEATSQKDKSLRLNGFDVTKTLFSDVRSSTFTERYNSFFVDYDLIPLLVQQAMPQSVQTPRGEAPTSKLARMADAADAIALSDVMSNCVRMRG---QWSLLTSVAAMNVKAAYHASGSVAFPGFPEWFGKNSTMGKRRRLLGELSMHLNHRVSGGSQSLRMHYMETLKSAFYAPMLEKGADGVPDTIAMLDSYGLSKQDLTESCHAWPFFTLRWLQEFQFKGITTDWFARVPGAVKSKLTRAYNASTHRSQAL 801
BLAST of mRNA_H-paniculata_contig200.5129.1 vs. uniprot
Match: A0A7S3JSX2_9STRA (Replication factor C subunit 1 (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JSX2_9STRA) HSP 1 Score: 415 bits (1066), Expect = 4.890e-130 Identity = 277/753 (36.79%), Postives = 389/753 (51.66%), Query Frame = 0
Query: 8 PPNEGNKEVPKGADQCLSGKTFVVSGVLDSLG-REAAEDLIKEYGGKVTGSVSSKTAFLLLGSVLDDGRPPEEGSKYKKAQQHKT-------KIIDEDGLFKMLRDSNPGGRGSSASSTPTAASAATGASKKPGVANPYAKAAVANPYGSFTAKXXXXXXXXXXXXXXGAESGGAKSPAKVSRNGKGSSSSSTPSVLNKPGQMWVDKHKPQATKDIIGHTGQVTKLQTWLRNWENWHL--KANGPKPPQGKDNPGARAALLSGVPGVGKSSTATLVAKEMGYHVFELNASDTRNKSSLSVELASVIGNQCLNFTAEGRSRSSXXXXXXXXXXXXXXXXXXXXXKKQLVVMDEVDGMGGSDRGGIQELIALIKKAKVPIIAICNDRQHQKIRSLVNHCYDLRFQRPQKATIAKRVKAIAKMEGMDVDDNAAEMLVEANGNDIRQVLHALQMWSRKSS--------------------------KLSYMNLKGGL-AAIEKDKVQRCGPFEAARSILGG-ERTPLKERYEAFFTDYSLLPLLVHQNY---PSSLMKIDPSTRTDVTMRAAAACSDADIISGKMRGDVQHWELLPAQAALNVRVGSIGAGSLGFPEFPKWLGNYSRENKRRRLLGELSTHLNASVSGGPEAVRLSYVHFLKTVLTRPLRERGAEGAQE-------CVDMLEEYGLSRDDLFEIMPEFQLSSTGMKHPPPDVFGCLDGKTKSAVTRCYNSISHKSQALVEAMQAPKK 712
PP+ K + CL G +FV+SGVLD R E IK GG+V+GSVS KT FL++G++L+DGR EEG K+K A + K K++D + R S P + G+ K G+ + KV + SSS S + ++W D++KP++TKD++G+ V KL+++L NWE HL ++ K K+NP A+AALLSG PG+GK++ A L+AKE GY V ELNASD R+K SL+ +L + L F A + K+L++MDEVDG+ GSDRGG QELI LIK ++VPII ICNDRQ K++ L N C+DLR +RP K TIAKR+ IA EG+D++ NAAE+L E GNDIRQ L+ALQMWS + S K +Y+ +K L IEKD + R F+ A+SIL ER ER E+FF DY L PLL+H+NY +S+ + + ++A+ + S +D++ K+R + Q+W LL QAA+ V+VG G P FP W G S K RL EL+ HLN S + +RL Y+ L + +++P ++ A + +D ++EYG+SRDD F+ MP+ ++ P P LD K K+ T+ YNS +H SQAL + APKK
Sbjct: 102 PPSTTISNSSKNPELCLDGISFVLSGVLDEKPERSQVESYIKSLGGRVSGSVSGKTNFLVVGTLLEDGRSVEEGRKFKDAIERKVTIIRGWEKLVDTVEEMRKKRQSKP----------------SEGSLGKLGLTKSKKR--------------------------------------KVGSSTAPSSSMSGSGIERIENELWADRYKPKSTKDVLGNGEVVKKLRSFLENWEKVHLGPESKRKKLVPSKENPNAKAALLSGPPGIGKTTLAHLIAKEHGYDVLELNASDARSKKSLTEQLGGTLDCPTLKFGAINAKDMTT---------------------KRLLIMDEVDGLSGSDRGGSQELIRLIKISRVPIICICNDRQSNKVKGLANSCFDLRCKRPMKQTIAKRIVLIANKEGLDLEANAAELLAENCGNDIRQCLNALQMWSTELSTQGEESMLTHGVTEDNNDDNTSKQKRKATYLAMKSRLKGGIEKDSILRYTAFDGAKSILSDHERKSHNERIESFFIDYGLTPLLIHENYINASNSVKNCSIENKLERVVQASESLSISDLVEAKIRNE-QNWGLLTTQAAMIVKVGVDIQGFCMNPNFPAWFGKNSTTTKNYRLTSELAFHLNHRCSASKQTIRLDYLEPLLSYISQPFQQLDANDDTDDNNACALVIDRMDEYGVSRDDFFDSMPDLLVTKNS---PIPK----LDTKAKTKFTKTYNSRNHSSQALHKDAPAPKK 771
BLAST of mRNA_H-paniculata_contig200.5129.1 vs. uniprot
Match: A0A7S3ZNL0_9STRA (Replication factor C subunit 1 n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZNL0_9STRA) HSP 1 Score: 415 bits (1066), Expect = 7.270e-129 Identity = 274/713 (38.43%), Postives = 369/713 (51.75%), Query Frame = 0
Query: 14 KEVPKGADQCLSGKTFVVSGVL--DSLGREAAEDLIKEYGGKVTGSVSSKTAFLLLGSVLDDGRPPEEGSKYKKAQQHKTKIIDEDGLFKM-LRDSNPGGRGSSASSTPTAASAATGASKKPGVANPYAKAAVANPYGSFTAKXXXXXXXXXXXXXXGAESGGAKSPAKVSRNGKGSSSSSTPSVLNKPGQMWVDKHKPQATKDIIGHTGQVTKLQTWLRNWENWHL--KANGPKPPQGKDNPGARAALLSGVPGVGKSSTATLVAKEMGYHVFELNASDTRNKSSLSVELASVIGNQCLNFTAEGRSRSSXXXXXXXXXXXXXXXXXXXXXKKQLVVMDEVDGMGGSDRGGIQELIALIKKAKVPIIAICNDRQHQKIRSLVNHCYDLRFQRPQKATIAKRVKAIAKMEGMDVDDNAAEMLVEANGNDIRQVLHALQMW--SRKSSKLSYMNLKGGLAAIEKDKVQRCGPFEAARSILGG-ERTPLKERYEAFFTDYSLLPLLVHQNYPSSLMK-------IDPSTRTDVTMRAAAACSDADIISGKMRGDVQHWELLPAQAALNVRVGSIGAGSLGFPEFPKWLGNYSRENKRRRLLGELSTHLNASVSGGPEAVRLSYVHFLKTVLTRPLRERGAEGAQECVDMLEEYGLSRDDLFEIMPEFQLSSTGMKHPPPDVFGCLDGKTKSAVTRCYNSISHKSQALVEAMQAPK 711
K+ P L+G TFV +GVL D + RE AED+IKE GGK TG+VS +T +++ G +L+DGRP EEGSK++ A+ KT +I FK L+D++ A K P V A P + + G +W D+HKP+ KD++G+ +KL WL WE HL KP NP ARAALLSG PG+GKS+ A L+ ++ G+ V E NASDTR+K S+ LA +G L F +G R +++ V+MDEVDG+ SDRGG LI LIK PII ICNDRQ K++SL NHCYDLR +RP K +AKR+ A+A EG+ ++ NAAE+LV++ GNDIRQ L+ALQMW S S K +Y ++KG ++AI KD++QR F+AA+ IL +R +R EAFF DY+ +PL+V Q+Y + M + + + AA SD D+I ++R D Q W LLP QA+ V VG+ G P+F +W G S K RR +LS L VS G EAVR Y+ L ++ PL A G ++ L+ YGLSRDDL E +P+ +L P +F LD K KSA TR YNS+ H +Q L A K
Sbjct: 241 KKAPAEPQLALTGTTFVFTGVLAGDDVTRELAEDMIKERGGKCTGAVSGRTNYVVCGELLEDGRPVEEGSKFRAAEDKKTTLIRGARAFKQFLQDAD-----------------AKFKDKAPPVK--------------------------------------ALPPLERPKAAPG---------------LWADRHKPKQNKDMMGNGDIRSKLGKWLDQWERVHLGDPKKRIKPKHEPQNPSARAALLSGPPGIGKSTMAALLCEQRGFEVVEYNASDTRSKKSIEGGLADALGCGSL-FGKKGGQR-----------------------RRRCVIMDEVDGLSASDRGGSAALIKLIKTTATPIICICNDRQSPKVKSLANHCYDLRCKRPMKQIVAKRLVAVAAAEGLTLEQNAAELLVDSCGNDIRQCLNALQMWTQSNASGKATYGDMKGRISAISKDEMQRASTFDAAKMILSDHQRKSHIDRVEAFFHDYTAMPLMVQQSYIQAAMNAKEGGKPLSQLGKLERISEAAERLSDVDLIDRRIRQD-QDWSLLPLQASTTVGVGATVGGFCMNPQFSQWFGKNSTTQKNRRQCADLSYRLGHRVSAGREAVRRDYLGPLLRHVSAPLLGGDASGT---IERLDAYGLSRDDLMETLPDLELHDKDK----PKLFASLDAKAKSAFTRAYNSVGHSAQGLQPASMVVK 851
BLAST of mRNA_H-paniculata_contig200.5129.1 vs. uniprot
Match: H3GWA8_PHYRM (Replication factor C subunit 1 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GWA8_PHYRM) HSP 1 Score: 413 bits (1061), Expect = 1.060e-128 Identity = 261/699 (37.34%), Postives = 372/699 (53.22%), Query Frame = 0
Query: 14 KEVPKGADQCLSGKTFVVSGVLDSLGREAAEDLIKEYGGKVTGSVSSKTAFLLLGSVLDDGRPPEEGSKYKKAQQHKTKIIDEDGLFKMLRDSNPGGRGSSASSTPTAASAATGASKKPGVANPYAKAAVANPYGSFTAKXXXXXXXXXXXXXXGAESGGAKSPAKVSRNGKGSSSSSTPSVLNKPGQMWVDKHKPQATKDIIGHTGQVTKLQTWLRNWENWHLKANGPKPPQGK--DNPGARAALLSGVPGVGKSSTATLVAKEMGYHVFELNASDTRNKSSLSVELASVIGNQCLNF-TAEGRSRSSXXXXXXXXXXXXXXXXXXXXXKKQLVVMDEVDGMGGSDRGGIQELIALIKKAKVPIIAICNDRQHQKIRSLVNHCYDLRFQRPQKATIAKRVKAIAKMEGMDVDDNAAEMLVEANGNDIRQVLHALQMWSRKSSKLSYMNLKGGLAAIEKDKVQRCGPFEAARSILGGERTPLKERYEAFFTDYSLLPLLVHQNYPSSLMKIDPST--RTDVTMRAAAACSDADIISGKMRGDVQHWELLPAQAALNVRVGSIGAGSLGFPEFPKWLGNYSRENKRRRLLGELSTHLNASVSGGPEAVRLSYVHFLKTVLTRPLRERGAEGAQECVDMLEEYGLSRDDLFEIMPEFQLSSTGMKHPPPDVFGCLDGKTKSAVTRCYNSISHKSQALVEAM 707
K+VP CL GKTF SG+LDSL RE A L+K GG VT SV+ T +L++G+ L+ G E +KYK+A +I+ ++ + ++ + AA A A+ E+ GAK+ S GK +SS +N ++W DK+KPQ +IG+ KL+ WL +WE H+K P K +N GA+ LLSG PG+GK++ A LVA+E G+ ELNASDTR+K L L V+G Q L F + G+S+ ++++VMDEVDGM G DRGG ELI LIKK+K PII ICNDRQ QK+RSL NH +DLR +RP K I KR+ I EG+ ++ NA E + GNDIRQ+L +Q W ++K++Y ++ + KD+ R PF A + I + + R EA+F DY L+PL+V +NY S+M S+ + M A+ S++D+++ +R + Q W+LL QAA+NV AG +G PEF KWLG S +K +RLL ELS + + SG E +RL YV ++K +L + L G E E +++L+E ++R+DL E M F+ G+K + LD K K+A TR YN SHKSQA+VE++
Sbjct: 157 KKVPAPCSGCLDGKTFAFSGLLDSLSREDAVHLVKSCGGSVTNSVTRSTKYLVIGATLEQGGKVTEAAKYKEAVAKSVRILTQNEFYNLITE-----------------------------------AAAAQQAQDLAAEKRRIK----------VEAAGAKT---TSTKGKQKLNSS----INN--ELWTDKYKPQTLDHMIGNIELGRKLKMWLMDWEAMHVKGTKKIPFTTKLSENRGAKTVLLSGPPGIGKTTIANLVARECGFECTELNASDTRSKKMLQTGLKDVLGTQALQFGVSTGKSKEKMHLA------------------RRVIVMDEVDGMSGGDRGGTAELIQLIKKSKTPIICICNDRQSQKVRSLANHSFDLRMRRPTKIQIGKRLMEIGLKEGLHMEKNAIEEAADRCGNDIRQLLTQMQRWRLTTTKITYADMVNPSSQHNKDESLRLNPFSATQQIFQRDLS-FDARNEAYFVDYDLMPLMVQENYIQSIMNNRTSSDENLEAAMHASEFISESDLLNTYVRVE-QRWDLLTKQAAMNVGACVYSAGFIGHPEFSKWLGKNSSASKSKRLLSELSVRMRSHASGSREVIRLDYVPYMKEILLKKLLS-GEENIHEVIELLDECEITREDLTESMESFKFP--GVKRHS---YSELDSKAKTAFTRMYNKASHKSQAVVESV 775
BLAST of mRNA_H-paniculata_contig200.5129.1 vs. uniprot
Match: D0NZ13_PHYIT (Replication factor C subunit 1 n=5 Tax=Phytophthora TaxID=4783 RepID=D0NZ13_PHYIT) HSP 1 Score: 413 bits (1061), Expect = 3.090e-128 Identity = 263/699 (37.63%), Postives = 375/699 (53.65%), Query Frame = 0
Query: 14 KEVPKGADQCLSGKTFVVSGVLDSLGREAAEDLIKEYGGKVTGSVSSKTAFLLLGSVLDDGRPPEEGSKYKKAQQHKTKIIDEDGLFKMLRDSNPGGRGSSASSTPTAASAATGASKKPGVANPYAKAAVANPYGSFTAKXXXXXXXXXXXXXXGAESGGAKSPAKVSRNGKGSSSSSTPSVLNKPGQMWVDKHKPQATKDIIGHTGQVTKLQTWLRNWENWHLKANGPKPPQGK--DNPGARAALLSGVPGVGKSSTATLVAKEMGYHVFELNASDTRNKSSLSVELASVIGNQCLNF-TAEGRSRSSXXXXXXXXXXXXXXXXXXXXXKKQLVVMDEVDGMGGSDRGGIQELIALIKKAKVPIIAICNDRQHQKIRSLVNHCYDLRFQRPQKATIAKRVKAIAKMEGMDVDDNAAEMLVEANGNDIRQVLHALQMWSRKSSKLSYMNLKGGLAAIEKDKVQRCGPFEAARSILGGERTPLKERYEAFFTDYSLLPLLVHQNYPSSLMKIDPST--RTDVTMRAAAACSDADIISGKMRGDVQHWELLPAQAALNVRVGSIGAGSLGFPEFPKWLGNYSRENKRRRLLGELSTHLNASVSGGPEAVRLSYVHFLKTVLTRPLRERGAEGAQECVDMLEEYGLSRDDLFEIMPEFQLSSTGMKHPPPDVFGCLDGKTKSAVTRCYNSISHKSQALVEAM 707
K+VP CL GKTF SGVL+SL RE A L+K GG + S++ T +L++GS L+ G +GSKYK+A +I+ ++ + ++ ++ A++ T AA A K AE+G K+ + KG+ ST +N ++W DK+KPQ +IG+ KL+TWL +WE H+K P K +N GA+ LLSG PG+GK++ A LVA+E G+ ELNASDTR+K L L V+G Q L F A G + +++++MDEVDGM G DRGG ELI L+KK+K PII ICNDRQ QK+RSL NH +DLR +RP K I KR+ I EG+ ++ NA E + GNDIRQ+L +Q W ++K++Y ++ + KD+ R PF A + I E + R EA+F DY L+PL+V +NY S+M S+ + M A+ S++D+++ +R + Q W+LL QAA+NV AG +G PEF KWLG S +K +RLL ELS + A SG E +RL YV ++K +L + L G + E +++L+E +SR+DL E M F+ G+K + LD K K+A TR YN SHKSQA+VEA+
Sbjct: 202 KKVPAPCSGCLDGKTFAFSGVLESLSREDAVHLVKSCGGSIAISITRSTKYLVIGSTLEQGGNVTDGSKYKEAVAKNVRILTQNEFYNLITEA--------ATAQQTQDLAAEKAKIK-------------------------------------AETGALKT------SSKGNQKLST--SIND--ELWTDKYKPQTLNHMIGNIELGKKLKTWLLDWEAMHVKGTKKVPFSTKLSENRGAKTVLLSGPPGIGKTTIANLVARECGFACTELNASDTRSKKMLQTGLKDVLGTQALQFGAASGEFKEKMHLA------------------RRVIIMDEVDGMSGGDRGGTAELIQLLKKSKTPIICICNDRQSQKVRSLANHSFDLRMRRPTKVQIGKRLMEIGLNEGLHMEKNAVEEAADRCGNDIRQLLTQMQRWRLTTTKITYADMVNPSSQHNKDESLRLNPFSATQQIFQRELS-FDARNEAYFVDYDLMPLMVQENYIQSIMNNRRSSDENLEAAMHASEFISESDLLNTYVRVE-QRWDLLTKQAAMNVGACVYSAGFIGHPEFSKWLGKNSSASKSKRLLSELSVRMRAHASGSREVIRLDYVPYMKEILLKKLLS-GEDNIHEVIELLDECEISREDLTESMESFKFP--GVKRHS---YSELDTKAKTAFTRMYNKASHKSQAVVEAV 819 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig200.5129.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig200.5129.1 ID=prot_H-paniculata_contig200.5129.1|Name=mRNA_H-paniculata_contig200.5129.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=767bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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