prot_H-paniculata_contig200.5129.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig200.5129.1
Unique Nameprot_H-paniculata_contig200.5129.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length767
Homology
BLAST of mRNA_H-paniculata_contig200.5129.1 vs. uniprot
Match: D8LND0_ECTSI (Replication factor C subunit 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LND0_ECTSI)

HSP 1 Score: 976 bits (2523), Expect = 0.000e+0
Identity = 519/725 (71.59%), Postives = 573/725 (79.03%), Query Frame = 0
Query:    2 GGSRQAPPNEGNKEVPKGADQCLSGKTFVVSGVLDSLGREAAEDLIKEYGGKVTGSVSSKTAFLLLGSVLDDGRPPEEGSKYKKAQQHKTKIIDEDGLFKMLRDSNPGGRGSSASSTPTAASAATGASKKPGVANPYA-KAAVANPYGSFTAKXXXXXXXXXXXXXXGAESGGAKSPAKVSRNGKGSS------------SSSTPSVLNKPGQMWVDKHKPQATKDIIGHTGQVTKLQTWLRNWENWHLKANGPKPPQGKDNPGARAALLSGVPGVGKSSTATLVAKEMGYHVFELNASDTRNKSSLSVELASVIGNQCLNFTAEGRSRSSXXXXXXXXXXXXXXXXXXXXXKKQLVVMDEVDGMGGSDRGGIQELIALIKKAKVPIIAICNDRQHQKIRSLVNHCYDLRFQRPQKATIAKRVKAIAKMEGMDVDDNAAEMLVEANGNDIRQVLHALQMWSRKSSKLSYMNLKGGLAAIEKDKVQRCGPFEAARSILGG-ERTPLKERYEAFFTDYSLLPLLVHQNYPSSLMKIDPSTRTDVTMRAAAACSDADIISGKMRGDVQHWELLPAQAALNVRVGSIGAGSLGFPEFPKWLGNYSRENKRRRLLGELSTHLNASVSGGPEAVRLSYVHFLKTVLTRPLRERGAEGAQECVDMLEEYGLSRDDLFEIMPEFQLSSTGMKHPPPDVFGCLDGKTKSAVTRCYNSISHKSQALVEAMQAPKK 712
            GG+R APPNEG KEVP G +QCL+GK FVVSGVLDSLGREAAEDLIK+YGGKVTG+VSS+T FL+LG+VLDDGRPPEEGSKYK+A   KT+IIDEDGLFKMLRDSNP G+                 + KP VANPY  K AV NPY S  A                A   G K  A   ++  G+S            + +  +V   PGQMWVDK+KP ++  +IGH GQV KL+ WL+NWE WHLK  G K P GKDNPGARAALLSGVPGVGKSSTATLVA+EMGYHV ELNASDTR+K SLS ELASVIGN+ L+FTA G     XXX                  +KQLVVMDEVDGMGGSDRGGIQELI LIKK++VPIIAICNDRQHQKIRSLVNHCYDLRF RPQK TIAKRVKA+AKMEGMDVDDNAAEMLVEANGNDIRQVLHALQMWSRKSSK++YMNLKGG++AIEKDK QR GPF+AARSILGG  RTPL++RYE FFTDYSLLPLLVHQNY SSLM++D   RT+VT  A+AA SDADIISGKMRGDVQHWELLPAQAALNVRVGS+G GSLGFPEFPKWLGNYSRENKRRRLLGELSTHLNASVSGG EAVRLSY+HFLK +LT+PLRE GA GA  CVD+LEEYGLSRDDLFE++PEF LS  GMK PPPD+FG LD KT+SAVTRCYNS +HKSQAL  A+QAPKK
Sbjct:  235 GGARLAPPNEGKKEVPVGKEQCLAGKAFVVSGVLDSLGREAAEDLIKQYGGKVTGAVSSRTHFLVLGTVLDDGRPPEEGSKYKRAMVMKTRIIDEDGLFKMLRDSNPKGQQPPGXXXXXXXXXXXAPASKPAVANPYQPKKAVVNPYASMQAAAKKKAAVNPFGA---AVIAGGKGKAPAGKSPAGTSXXXXXXXXXXXGARAAAAVRQNPGQMWVDKYKPTSSSGVIGHAGQVKKLKVWLQNWEGWHLK--GAKAPTGKDNPGARAALLSGVPGVGKSSTATLVAREMGYHVMELNASDTRSKRSLSEELASVIGNKVLSFTANGXXXXXXXXGF----------------RKQLVVMDEVDGMGGSDRGGIQELILLIKKSRVPIIAICNDRQHQKIRSLVNHCYDLRFARPQKVTIAKRVKAVAKMEGMDVDDNAAEMLVEANGNDIRQVLHALQMWSRKSSKMTYMNLKGGISAIEKDKNQRIGPFDAARSILGGASRTPLRDRYELFFTDYSLLPLLVHQNYLSSLMQVDAKVRTEVTAAASAAVSDADIISGKMRGDVQHWELLPAQAALNVRVGSVGGGSLGFPEFPKWLGNYSRENKRRRLLGELSTHLNASVSGGTEAVRLSYIHFLKRLLTQPLREEGAAGAPACVDLLEEYGLSRDDLFEVLPEFVLSGKGMKRPPPDLFGSLDSKTRSAVTRCYNSQAHKSQALAVALQAPKK 938          
BLAST of mRNA_H-paniculata_contig200.5129.1 vs. uniprot
Match: A0A1Z5JWY4_FISSO (Replication factor C subunit 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JWY4_FISSO)

HSP 1 Score: 448 bits (1152), Expect = 3.830e-141
Identity = 291/724 (40.19%), Postives = 402/724 (55.52%), Query Frame = 0
Query:   28 TFVVSGVLDSLGREAAEDLIKEYGGKVTGSVSSKTAFLLLGSVLDDGRPPEEGSKYKKAQQHKTKIIDED-----GLFKMLRD---------------SNPGGRGSSASSTPTAASAATGASKKPGVANPYAKAAVANPYGSFTAKXXXXXXXXXXXXXXGAESGGAKSPAKVSRNGKGSSSSSTPSVLNKPGQMWVDKHKPQATKDIIGHTGQVTKLQTWLRNWEN-WHLKANGPKPPQGKDNPGARAALLSGVPGVGKSSTATLVAKEMGYHVFELNASDTRNKSSLSVELASVIGNQCLNFTAEGRSRSSXXXXXXXXXXXXXXXXXXXXXKKQLVVMDEVDGMGGSDRGGIQELIALIKKAKVPIIAICNDRQHQKIRSLVNHCYDLRFQRPQKATIAKRVKAIAKMEGMDVDDNAAEMLVEANGNDIRQVLHALQMWSRKSSKLSYMNLKGGLAAIEKDKVQRCGPFEAARSILGGER-----TPLKER------YEAFFTDYSLLPLLVHQNYPSSLM-------KIDPSTRTDVTMR---AAAACSDADIISGKMRGDVQHWELLPAQAALNVRVGSIGAGSLG-----FPEFPKWLGNYSRENKRRRLLGELSTHLNASVSGGPEAVRLSYVHFLKTVLTRPLRERGAEGAQECVDMLEEYGLSRDDLFEIMPEFQLSSTGMKHPPPDVFGCLDGKTKSAVTRCYNSISHKSQALV 704
            TF  SGVL+ L R+AA+DL+K  GG+VT +VSSKT +L++G+VL+DGR  ++GSKYKKA + K+ +I        GL +   D               S P    S+  ST TAA+     +KK   +NPYA  A AN YG   A                        PA  S     ++ +  P + +    +WVDK+KP + ++I+G+   V KL  WL +WE  ++   N  K     + P  +AALLSG PG+GK++TATLVAKE G  V E NASD R+K +L+     + G+Q ++FT +                           KK+ ++MDEVDGMG  DR G+ ELI +IKK+KVPI+ ICNDRQ QK++SL+ +C DLR++RP K  IA R   + + EG++V+ NAAE L E+ GNDIRQVL+ LQMWSRK + L + +LK     I KD + R   F+AA+ +L G +     TP +ER      ++AFF DY    LLV QNY   L        + + +++ +V  R   AA A SD D+   ++RG  Q+W LLP  ++L V+ G   +G  G     FPEF  WLG  S + K+ RLL EL  HLN S+SGG    RLSY+  L+T L + L+   A+ AQ  +D ++EYGL RDD+FE + EF LSS+         F  L  K K++ TR YN  +H SQALV
Sbjct:  195 TFCFSGVLEQLSRDAAQDLVKTLGGRVTTAVSSKTDYLVVGNVLEDGRDYQQGSKYKKAMELKSVVIVRGEELFYGLLQTYHDLCGPVVAPAVASTLVSAPPSVPSNPYSTATAATKVNPYAKK--ASNPYAATAKANSYGRKAA------------------------PAMTSVTSNTTTMAVAPVLGDTSSMLWVDKYKPTSAREILGNQDAVKKLTQWLNSWERIFNTTQNSNKTFSAPNGPW-KAALLSGPPGIGKTTTATLVAKEAGRDVLEFNASDVRSKKALTNVFGDITGSQTIDFTTQA--------------------------KKRCIIMDEVDGMGAGDRSGMAELIQMIKKSKVPIVCICNDRQSQKLKSLIPYCLDLRYRRPTKNVIANRAVQVGQQEGLNVEQNAAEALAESCGNDIRQVLNCLQMWSRKGNSLKFKDLKERANDINKDDILRVSLFDAAKQLLEGRQGLNGSTPEQERDSFFRRHDAFFVDYGFTGLLVQQNYLKVLQGPFGEAKRKNAASQLEVLHRMSDAAEALSDYDLAENQLRGG-QNWSLLPLCSSLIVKTGFHASGPNGGFLPGFPEFTSWLGRNSTKGKKYRLLSELQHHLNYSISGGGSETRLSYLPVLRTRLLQLLQ---ADDAQAAIDFMDEYGLDRDDVFEKLDEFMLSSSKAA-----TFNDLSSKKKASFTRLYNQTAHSSQALV 856          
BLAST of mRNA_H-paniculata_contig200.5129.1 vs. uniprot
Match: A0A835YT94_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT94_9STRA)

HSP 1 Score: 438 bits (1126), Expect = 2.420e-140
Identity = 266/643 (41.37%), Postives = 341/643 (53.03%), Query Frame = 0
Query:  195 VLNKPGQMWVDKHKPQATKDIIGHTGQVTKLQTWLRNWENWHLKANGPKPPQGK--DNPGARAALLSGVPGVGKSSTATLVAKEMGYHVFELNASDTRNKSSLSVELASVIGNQCLNFTAEGRSRSSXXXXXXXXXXXXXXXXXXXXXKKQLVVMDEVDGMGGSDRGG----------------IQELIALIKKAKVPIIAICNDRQHQKIRSLVNHCYDLRFQRPQKATIAKRVKAIAKMEGMDVDDNAAEMLVEANGNDIRQVLHALQMWSRKSSKLSYMNLKGGLAAIEKDKVQRCGPFEAARSILGGERTPLKERYEAFFTDYSLLPLLVHQNYPSSLMKIDPSTRTDVTMRAAAACSDADIISGKMRGDVQHWELLPAQAALNVRVGSIGAGSLGFPEFPKWLGNYSRENKRRRLLGELSTHLNASVSGGP--------------------EAVRLSYVH--------------------------------FLKTVLTRPLRERGAEGAQECVDMLEEYGLSRDDLFEIMPEFQLSST----------------GMKH------------------------PPP---------------DVFGCLDGKTKSAVTRCYNSISHKSQALVEAMQAPKK 712
            V ++PGQ+W DK++PQ   D++GHTG V KL  WL N+E     A      +GK  D+   RA L+SG PG+GK++ AT+VAK +G+ V E NASDTR+K S+   L  V+ N  L+F ++  S+                        K++++MDEVDGMGG DRGG                + ELI LI   KVPII ICNDRQ  KIRSLVNHC D+RF+RP K  IAKR+K +A+ EG+D+D NAAEML E+ GNDIRQ LHA+QMWSR S  ++YM +K GL A+ KDK QR   F+ AR I   +  P  ERYEAFFTDY L+PLLV QN+P ++ K + +T      RAA A SDA++    +RGDV HWELLP  AAL++RVG    G +GFP FP+WLG  S   KRRRL+ E++TH+NA  +  P                    EAV L YV                                  L  V+T PLR  GA+G  E + ML+EYGLSRDDL E M +  L  T                G+ H                         PP               D  G +    K+A+TR YNS +H SQALV+ + APK+
Sbjct:   42 VSSEPGQLWADKYRPQKPSDLLGHTGDVRKLTEWLNNFEARAAPAVKGAKGKGKAGDDMHKRAVLISGPPGIGKTTAATIVAKSLGFEVTEFNASDTRSKKSMEEGLKDVLSNTVLSFGSKAGSKPP----------------------KRVIIMDEVDGMGGGDRGGRNVAEADVQMRLLARSMGELIKLIAITKVPIICICNDRQDTKIRSLVNHCIDMRFKRPVKTMIAKRMKEVAQKEGLDIDLNAAEMLSESVGNDIRQCLHAMQMWSRGSRTMAYMEVKDGLGAVSKDKSQRVSAFDGARMIFQTKSIPQAERYEAFFTDYGLVPLLVQQNWPDAIAKSNKATMMQRMARAADAISDAELAGSMVRGDVNHWELLPLYAALHLRVGLECDGYIGFPGFPQWLGKNSAATKRRRLVAEINTHMNARQARTPSPDNDHLPLESLLSLVNAEREAVWLDYVSSSVLSVRLIVIQSEREKRVXXXXXXXXXXXVPVLTRVITEPLRSAGADGVGEAMAMLDEYGLSRDDLLESMADLTLKGTRVFIVPIHTCAVRHALGVVHRQGANDFNLSSPIHAYLYMYIEVPKPPVPLAMRATLRRQGTRDYIGEVSTAAKTALTRAYNSTTHTSQALVDEISAPKR 662          
BLAST of mRNA_H-paniculata_contig200.5129.1 vs. uniprot
Match: A0A7S4IHD5_9STRA (Replication factor C subunit 1 (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IHD5_9STRA)

HSP 1 Score: 432 bits (1110), Expect = 6.080e-133
Identity = 328/800 (41.00%), Postives = 429/800 (53.62%), Query Frame = 0
Query:   22 QCLSGKTFVVSGVLD----SLGREAAEDLIKEYGGKVTGSVSSKTAFLLLGSVLDDGRPPEEGSKYKKAQQ---HKTKIIDED----GLFKMLRDS-NP---------GGRGSSASSTPTAASA-------------------------ATGASKKPGVANPYAKAAVA------------------NPY---GSFTAKXXXXXXXXXXXXXXGAESGGAKSPAKVSRNGKGSSSS---STPSVLNKPGQMWVDKHKPQATKDIIGHTGQVTKLQTWLRNWEN-WHLKANGPKPPQGKDNPGAR-AALLSGVPGVGKSSTATLVAKEMGYHVFELNASDTRNKSSLSVELASVIGNQCLNFTAEGRSRSSXXXXXXXXXXXXXXXXXXXXXKKQLVVMDEVDGMGGSDRGGIQELIALIKKAKVPIIAICNDRQHQKIRSLVNHCYDLRFQRPQKATIAKRVKAIAKMEGMDVDDNAAEMLVEANGNDIRQVLHALQMWSRK-----------SSKLSYMNLKGGLAAIEKDKVQRCGPFEAARSILGGER--TP----------LKERYEAFFTDYSLLPLLVHQNYPSSLMKIDPSTRTDVTM-----------RAAAACSDADIISGKMRGDVQHWELLPAQAALNVRVGSIGAGSLG-----FPEFPKWLGNYSRENKRRRLLGELSTHLNASVSGGPEAVRLSYVHFLKTV-LTRPLRERGAEGAQECVDMLEEYGLSRDDLFEIMPEFQLSSTGMKHPPPDVFGCLDGKTKSAVTRCYNSISHKSQALVEAMQA 709
            +CLSG TFV +G+L     +  R+ AED +K  GG+VT +VS KT +L+ G  L+DGR  EEGSKY+KA +    K  I+ +      L KM+ +  NP         G        TP A                            + G +  P  ANPYAK   A                  NPY   G+    XXXXXXXXXXXXXX     G K PA    NG GS++     +      P  +W DK+ P+ T+DI+G+   VTKL  WL  WE+ +++ ++G K      N G + AALLSG PG+GK++TATLVA+E G  V ELNASD R+K SL+  L  V G+Q LNF    +       XXXXXXXX          +K++++MDEVDGMG  DR G+ ELIA+IKK+KVPII ICNDRQ QK+RSLV HC DLR++RP K  IA+R   + +MEGM V+ NAAE + E+ GND+RQVL+ LQMWS K           ++ L+Y  LK    AI KD++ R   F+A + I+ G R  TP          L +R +A+FTDY L+ L VHQNYP  +     +T+ +              +AA + SD  +    +RG   +W LLP  + L V  G    G  G     FPEF  WLG  S   K+RRLL EL  HLN +VS     +RL+YV  L++  L   + + G    +E +DM++EYGL RDDLFE + EF L + G K      F  LD K K+A TR YN  SH+SQALVE   A
Sbjct:  352 ECLSGLTFVFTGILSCPILAGSRDEAEDYVKTLGGRVTKAVSGKTDYLVCGYELEDGRGVEEGSKYRKANELGGDKVGIVRDSTEFYALVKMIDERRNPNKKVEKRGEGEEKKEEDGTPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAGMASPPARANPYAKKGGASPAXXXXXRSGVGXXXXXNPYAAAGAXXXXXXXXXXXXXXXXXXXXXXXGKKPPAAA--NGAGSTADRGGGSGGSSGDPNALWADKYAPRTTQDILGNRDAVTKLTNWLNRWESTFNVPSSGGKKSFSNPNGGPKKAALLSGPPGIGKTTTATLVARESGRDVLELNASDARSKKSLTENLGDVTGSQVLNFAPSAKGGKGKGGXXXXXXXXPPRK------QKRVIIMDEVDGMGAGDRSGMSELIAMIKKSKVPIICICNDRQSQKVRSLVAHCLDLRYRRPVKTVIARRAVEVGRMEGMHVEPNAAEAIAESCGNDVRQVLNCLQMWSSKKRDGNSDAAAGNNDLTYKGLKDRRDAISKDEMLRVTMFDATKLIIEGRRGLTPDSDRKAQLDSLYKRSDAYFTDYGLMGLNVHQNYPKVMTSQFQATKKERDEEGELGVLERLGKAADSMSDFAVAEEAVRGGDGNWGLLPLCSILAVSTGYHAGGERGGFLPGFPEFAGWLGKNSSRGKKRRLLQELDRHLNFAVSADRTELRLNYVPALRSAFLDLMMNKEGGPRTREVIDMMDEYGLDRDDLFETLDEFTLDAKGKK------FADLDSKVKAAFTREYNKGSHRSQALVEEQGA 1137          
BLAST of mRNA_H-paniculata_contig200.5129.1 vs. uniprot
Match: A0A7S2SF18_9STRA (Replication factor C subunit 1 n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SF18_9STRA)

HSP 1 Score: 419 bits (1077), Expect = 3.800e-132
Identity = 263/690 (38.12%), Postives = 366/690 (53.04%), Query Frame = 0
Query:   24 LSGKTFVVSGVLDSL-GREAAEDLIKEYGGKVTGSVSSKTAFLLLG--SVLDDGRPPEEGSKYKKAQQHKTKIIDEDGLFKMLRDSNPGGRGSSASSTPTAASAATGASKKPGVANPYAKAAVANPYGSFTAKXXXXXXXXXXXXXXGAESGGAKSPAKVSRNGKGSSSSSTPSVLNKPGQMWVDKHKPQATKDIIGHTGQVTKLQTWLRNWENWHLKANGPKPPQGKDNPGARAALLSGVPGVGKSSTATLVAKEMGYHVFELNASDTRNKSSLSVELASVIGNQCLNFTAEGRSRSSXXXXXXXXXXXXXXXXXXXXXKKQLVVMDEVDGMGGSDRGGIQELIALIKKAKVPIIAICNDRQHQKIRSLVNHCYDLRFQRPQKATIAKRVKAIAKMEGMDVDDNAAEMLVEANGNDIRQVLHALQMWSRKSSKLSYMNLKGGLAAIEKDKVQRCGPFEAARSILG---GERTPLKERYEAFFTDYSLLPLLVHQNY---PSSLMKIDPSTRTDVTMRAAAACSDADIISGKMRGDVQHWELLPAQAALNVRVGSIGAGSLGFPEFPKWLGNYSRENKRRRLLGELSTHLNASVSGGPEAVRLSYVHFLKTVLTRPLRERGAEGAQECVDMLEEYGLSRDDLFEIMPEFQLSSTGMKHPPPDVFGCLDGKTKSAVTRCYNSISHKSQALV 704
            L+ + FV +GVL     RE A D +K +G  VT  VSSKT  ++ G  + L+D RP E+  KY+ A +    I+DE+   K+L + +   + +S               +KP                                   G E   A++  K+   G   S    PS++     +WVDK+KP+   D+IG++ ++  L+ WL  WE+ H+K  GP PP  K+NPG++ ALLSG PG+GKSS A +V++  GY V ELNASD R+K  +S  L   +  + L+ ++E                            K+LV+MDEVDGM   DRGG+QELI L+KK KVPII ICNDRQ   +R+L  HCYDL+F RP  + I ++   IA+ EGM ++ NA  +LV +  ND+RQVL  LQMW R SSK+SY + K     + KD   +   FEA ++I     G+ T L ERY AFF +Y L+PL+V QNY    +S    D   +      AA A  D+D++  ++RGD+  W LLP QA  NV VGSI  G +GFP FP+WLG  S   K+ RLL E + H+    +     +RL Y+  L+  L +PL           +D ++ YGL RDD+FE M E QLS        P++F  +D KTK+A TR +N   H SQALV
Sbjct:   94 LTNRKFVFTGVLRKYPDREDAVDAVKRFGANVTTCVSSKTTDVVGGYQATLEDERPVEQTRKYRDAVEKGINILDEEAFLKLLEECDRKRKSASP--------------EKP-------------------------------MFEIGQEKAQAQAMPKLGDTGN--SKEENPSMM-----LWVDKYKPKVVGDLIGNSSKINALKNWLAKWESIHIKG-GPPPPFSKENPGSKVALLSGPPGIGKSSAAGIVSRAAGYDVMELNASDARSKKIISRVLGDALNCKSLSQSSE----------------------------KRLVIMDEVDGMSSDDRGGMQELIKLMKKTKVPIICICNDRQKSSVRTLAGHCYDLKFIRPTSSVIVRKASIIAEKEGMRLEPNALNILVASAQNDVRQVLGTLQMWKRGSSKISYDDAKRQQKTVGKDSEFKMSDFEACQAIFNQASGKET-LNERYGAFFINYDLMPLMVQQNYIGAANSAKGADEQEKLRRLSAAADAVCDSDLLQRRIRGDMS-WGLLPQQAMANVHVGSICKGFIGFPGFPEWLGKNSSRGKKSRLLSETAAHMRMKTNMNTRTLRLDYLCLLRDHLVKPLLTGDKGNVIRTIDSMDSYGLDRDDVFETMQELQLSG-------PNMFDRIDSKTKAAFTREFNKKIHTSQALV 693          
BLAST of mRNA_H-paniculata_contig200.5129.1 vs. uniprot
Match: A0A812KXV0_9DINO (Replication factor C subunit 1 n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812KXV0_9DINO)

HSP 1 Score: 421 bits (1082), Expect = 1.730e-131
Identity = 273/711 (38.40%), Postives = 368/711 (51.76%), Query Frame = 0
Query:   12 GNKEVPKGADQCLSGKTFVVSGVLDSLGREAAEDLIKEYGGKVTGSVSSKTAFLLLGSVLDDGRPPEEGSKYKKAQQHKTKIIDEDGLFKMLRDSNPGGRGSSASSTPTAASAATGASKKPGVANPYAKAAVANPYGSFTAKXXXXXXXXXXXXXXGAESGGAKSPAKVSRNGKGSSSSSTPSVLNKPGQMWVDKHKPQATKDIIGHTGQVTKLQTWLRNWENWHLKANGPKPP---QGKDNPGARAALLSGVPGVGKSSTATLVAKEMGYHVFELNASDTRNKSSLSVELASVIGNQCLNFTAEGRSRSSXXXXXXXXXXXXXXXXXXXXXKKQLVVMDEVDGMGGSDRGGIQELIALIKKAKVPIIAICNDRQHQKIRSLVNHCYDLRFQRPQKATIAKRVKAIAKMEGMDVDDNAAEMLVEANGNDIRQVLHALQMWSRK----SSKLSYMNLKGGLAAIEKDKVQRCGPFEAARSILGGERTP-LKERYEAFFTDYSLLPLLVHQNYPSSLMKIDPSTRTDVTMR---AAAACSDADIISG--KMRGDVQHWELLPAQAALNVRVGSIGAGSLGFPEFPKWLGNYSRENKRRRLLGELSTHLNASVSGGPEAVRLSYVHFLKTVLTRPLRERGAEGAQECVDMLEEYGLSRDDLFE---IMPEFQL---SSTGMKHPPPDVFGCLDGKTKSAVTRCYNSISHKSQAL 703
            G   VP     CL G    V+GV   L RE   D+IK YGG VTGSVS KT +LL G  L+ G P    +KY+ A++     +        L                                 P A A V                            GG+   A+ ++  +G+  +           MWVD++KP + +D++G+   + +L  WL++WE  H+K   PKP    +   NPGARA LLSG PG+GKS+ A LVA+ +GY V E+NASDTR+K SL   LA V+GN+ + F A       XXXXXXXX              +Q+V+MDEVDGM   DRGG  ELI +IK  + PII ICNDRQ   +RSL N C DL+F RP K  +AKR+  IA  +G+  + NA E LVE +GNDIRQ +H LQMW+        +L++  +K   A  +KDK  R   F+  +++    R+    ERY +FF DY L+PLLV Q  P S+        T    R   AA A + +D++S   +MRG    W LL + AA+NV+     +GS+ FP FP+W G  S   KRRRLLGELS HLN  VSGG +++R+ Y+  LK+    P+ E+GA+G  + + ML+ YGLS+ DL E     P F L        K    D F  + G  KS +TR YN+ +H+SQAL
Sbjct:  177 GRSTVPSAKRLCLQGVALAVTGVFPQLDREEVCDIIKTYGGTVTGSVSGKTHYLLTGDALESGDPVSASAKYRAAKERGVPTLTLPAFLDFLA--------------------------------PRAVAKV----------------------------GGSMPMARPAQRQRGAEEA-----------MWVDRYKPASVEDLVGNKALIGRLVAWLKDWEAIHIKKTKPKPAFDARAGTNPGARAVLLSGPPGIGKSTAALLVARAVGYQVQEMNASDTRSKRSLKETLAEVVGNRAITFFARAPGGGXXXXXXXXXTA------------RQVVIMDEVDGMSSGDRGGNAELIRIIKTTRRPIICICNDRQKSSVRSLANSCLDLKFSRPNKQQVAKRLALIAAEQGLAAEPNALEYLVETSGNDIRQTVHMLQMWANSPHGADGRLTFAAMKAAEATSQKDKSLRLNGFDVTKTLFSDVRSSTFTERYNSFFVDYDLIPLLVQQAMPQSVQTPRGEAPTSKLARMADAADAIALSDVMSNCVRMRG---QWSLLTSVAAMNVKAAYHASGSVAFPGFPEWFGKNSTMGKRRRLLGELSMHLNHRVSGGSQSLRMHYMETLKSAFYAPMLEKGADGVPDTIAMLDSYGLSKQDLTESCHAWPFFTLRWLQEFQFKGITTDWFARVPGAVKSKLTRAYNASTHRSQAL 801          
BLAST of mRNA_H-paniculata_contig200.5129.1 vs. uniprot
Match: A0A7S3JSX2_9STRA (Replication factor C subunit 1 (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JSX2_9STRA)

HSP 1 Score: 415 bits (1066), Expect = 4.890e-130
Identity = 277/753 (36.79%), Postives = 389/753 (51.66%), Query Frame = 0
Query:    8 PPNEGNKEVPKGADQCLSGKTFVVSGVLDSLG-REAAEDLIKEYGGKVTGSVSSKTAFLLLGSVLDDGRPPEEGSKYKKAQQHKT-------KIIDEDGLFKMLRDSNPGGRGSSASSTPTAASAATGASKKPGVANPYAKAAVANPYGSFTAKXXXXXXXXXXXXXXGAESGGAKSPAKVSRNGKGSSSSSTPSVLNKPGQMWVDKHKPQATKDIIGHTGQVTKLQTWLRNWENWHL--KANGPKPPQGKDNPGARAALLSGVPGVGKSSTATLVAKEMGYHVFELNASDTRNKSSLSVELASVIGNQCLNFTAEGRSRSSXXXXXXXXXXXXXXXXXXXXXKKQLVVMDEVDGMGGSDRGGIQELIALIKKAKVPIIAICNDRQHQKIRSLVNHCYDLRFQRPQKATIAKRVKAIAKMEGMDVDDNAAEMLVEANGNDIRQVLHALQMWSRKSS--------------------------KLSYMNLKGGL-AAIEKDKVQRCGPFEAARSILGG-ERTPLKERYEAFFTDYSLLPLLVHQNY---PSSLMKIDPSTRTDVTMRAAAACSDADIISGKMRGDVQHWELLPAQAALNVRVGSIGAGSLGFPEFPKWLGNYSRENKRRRLLGELSTHLNASVSGGPEAVRLSYVHFLKTVLTRPLRERGAEGAQE-------CVDMLEEYGLSRDDLFEIMPEFQLSSTGMKHPPPDVFGCLDGKTKSAVTRCYNSISHKSQALVEAMQAPKK 712
            PP+       K  + CL G +FV+SGVLD    R   E  IK  GG+V+GSVS KT FL++G++L+DGR  EEG K+K A + K        K++D     +  R S P                + G+  K G+     +                                      KV  +   SSS S   +     ++W D++KP++TKD++G+   V KL+++L NWE  HL  ++   K    K+NP A+AALLSG PG+GK++ A L+AKE GY V ELNASD R+K SL+ +L   +    L F A      +                      K+L++MDEVDG+ GSDRGG QELI LIK ++VPII ICNDRQ  K++ L N C+DLR +RP K TIAKR+  IA  EG+D++ NAAE+L E  GNDIRQ L+ALQMWS + S                          K +Y+ +K  L   IEKD + R   F+ A+SIL   ER    ER E+FF DY L PLL+H+NY    +S+       + +  ++A+ + S +D++  K+R + Q+W LL  QAA+ V+VG    G    P FP W G  S   K  RL  EL+ HLN   S   + +RL Y+  L + +++P ++  A    +        +D ++EYG+SRDD F+ MP+  ++      P P     LD K K+  T+ YNS +H SQAL +   APKK
Sbjct:  102 PPSTTISNSSKNPELCLDGISFVLSGVLDEKPERSQVESYIKSLGGRVSGSVSGKTNFLVVGTLLEDGRSVEEGRKFKDAIERKVTIIRGWEKLVDTVEEMRKKRQSKP----------------SEGSLGKLGLTKSKKR--------------------------------------KVGSSTAPSSSMSGSGIERIENELWADRYKPKSTKDVLGNGEVVKKLRSFLENWEKVHLGPESKRKKLVPSKENPNAKAALLSGPPGIGKTTLAHLIAKEHGYDVLELNASDARSKKSLTEQLGGTLDCPTLKFGAINAKDMTT---------------------KRLLIMDEVDGLSGSDRGGSQELIRLIKISRVPIICICNDRQSNKVKGLANSCFDLRCKRPMKQTIAKRIVLIANKEGLDLEANAAELLAENCGNDIRQCLNALQMWSTELSTQGEESMLTHGVTEDNNDDNTSKQKRKATYLAMKSRLKGGIEKDSILRYTAFDGAKSILSDHERKSHNERIESFFIDYGLTPLLIHENYINASNSVKNCSIENKLERVVQASESLSISDLVEAKIRNE-QNWGLLTTQAAMIVKVGVDIQGFCMNPNFPAWFGKNSTTTKNYRLTSELAFHLNHRCSASKQTIRLDYLEPLLSYISQPFQQLDANDDTDDNNACALVIDRMDEYGVSRDDFFDSMPDLLVTKNS---PIPK----LDTKAKTKFTKTYNSRNHSSQALHKDAPAPKK 771          
BLAST of mRNA_H-paniculata_contig200.5129.1 vs. uniprot
Match: A0A7S3ZNL0_9STRA (Replication factor C subunit 1 n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZNL0_9STRA)

HSP 1 Score: 415 bits (1066), Expect = 7.270e-129
Identity = 274/713 (38.43%), Postives = 369/713 (51.75%), Query Frame = 0
Query:   14 KEVPKGADQCLSGKTFVVSGVL--DSLGREAAEDLIKEYGGKVTGSVSSKTAFLLLGSVLDDGRPPEEGSKYKKAQQHKTKIIDEDGLFKM-LRDSNPGGRGSSASSTPTAASAATGASKKPGVANPYAKAAVANPYGSFTAKXXXXXXXXXXXXXXGAESGGAKSPAKVSRNGKGSSSSSTPSVLNKPGQMWVDKHKPQATKDIIGHTGQVTKLQTWLRNWENWHL--KANGPKPPQGKDNPGARAALLSGVPGVGKSSTATLVAKEMGYHVFELNASDTRNKSSLSVELASVIGNQCLNFTAEGRSRSSXXXXXXXXXXXXXXXXXXXXXKKQLVVMDEVDGMGGSDRGGIQELIALIKKAKVPIIAICNDRQHQKIRSLVNHCYDLRFQRPQKATIAKRVKAIAKMEGMDVDDNAAEMLVEANGNDIRQVLHALQMW--SRKSSKLSYMNLKGGLAAIEKDKVQRCGPFEAARSILGG-ERTPLKERYEAFFTDYSLLPLLVHQNYPSSLMK-------IDPSTRTDVTMRAAAACSDADIISGKMRGDVQHWELLPAQAALNVRVGSIGAGSLGFPEFPKWLGNYSRENKRRRLLGELSTHLNASVSGGPEAVRLSYVHFLKTVLTRPLRERGAEGAQECVDMLEEYGLSRDDLFEIMPEFQLSSTGMKHPPPDVFGCLDGKTKSAVTRCYNSISHKSQALVEAMQAPK 711
            K+ P      L+G TFV +GVL  D + RE AED+IKE GGK TG+VS +T +++ G +L+DGRP EEGSK++ A+  KT +I     FK  L+D++                 A    K P V                                       A  P +  +   G               +W D+HKP+  KD++G+    +KL  WL  WE  HL       KP     NP ARAALLSG PG+GKS+ A L+ ++ G+ V E NASDTR+K S+   LA  +G   L F  +G  R                       +++ V+MDEVDG+  SDRGG   LI LIK    PII ICNDRQ  K++SL NHCYDLR +RP K  +AKR+ A+A  EG+ ++ NAAE+LV++ GNDIRQ L+ALQMW  S  S K +Y ++KG ++AI KD++QR   F+AA+ IL   +R    +R EAFF DY+ +PL+V Q+Y  + M        +    + +    AA   SD D+I  ++R D Q W LLP QA+  V VG+   G    P+F +W G  S   K RR   +LS  L   VS G EAVR  Y+  L   ++ PL    A G    ++ L+ YGLSRDDL E +P+ +L         P +F  LD K KSA TR YNS+ H +Q L  A    K
Sbjct:  241 KKAPAEPQLALTGTTFVFTGVLAGDDVTRELAEDMIKERGGKCTGAVSGRTNYVVCGELLEDGRPVEEGSKFRAAEDKKTTLIRGARAFKQFLQDAD-----------------AKFKDKAPPVK--------------------------------------ALPPLERPKAAPG---------------LWADRHKPKQNKDMMGNGDIRSKLGKWLDQWERVHLGDPKKRIKPKHEPQNPSARAALLSGPPGIGKSTMAALLCEQRGFEVVEYNASDTRSKKSIEGGLADALGCGSL-FGKKGGQR-----------------------RRRCVIMDEVDGLSASDRGGSAALIKLIKTTATPIICICNDRQSPKVKSLANHCYDLRCKRPMKQIVAKRLVAVAAAEGLTLEQNAAELLVDSCGNDIRQCLNALQMWTQSNASGKATYGDMKGRISAISKDEMQRASTFDAAKMILSDHQRKSHIDRVEAFFHDYTAMPLMVQQSYIQAAMNAKEGGKPLSQLGKLERISEAAERLSDVDLIDRRIRQD-QDWSLLPLQASTTVGVGATVGGFCMNPQFSQWFGKNSTTQKNRRQCADLSYRLGHRVSAGREAVRRDYLGPLLRHVSAPLLGGDASGT---IERLDAYGLSRDDLMETLPDLELHDKDK----PKLFASLDAKAKSAFTRAYNSVGHSAQGLQPASMVVK 851          
BLAST of mRNA_H-paniculata_contig200.5129.1 vs. uniprot
Match: H3GWA8_PHYRM (Replication factor C subunit 1 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GWA8_PHYRM)

HSP 1 Score: 413 bits (1061), Expect = 1.060e-128
Identity = 261/699 (37.34%), Postives = 372/699 (53.22%), Query Frame = 0
Query:   14 KEVPKGADQCLSGKTFVVSGVLDSLGREAAEDLIKEYGGKVTGSVSSKTAFLLLGSVLDDGRPPEEGSKYKKAQQHKTKIIDEDGLFKMLRDSNPGGRGSSASSTPTAASAATGASKKPGVANPYAKAAVANPYGSFTAKXXXXXXXXXXXXXXGAESGGAKSPAKVSRNGKGSSSSSTPSVLNKPGQMWVDKHKPQATKDIIGHTGQVTKLQTWLRNWENWHLKANGPKPPQGK--DNPGARAALLSGVPGVGKSSTATLVAKEMGYHVFELNASDTRNKSSLSVELASVIGNQCLNF-TAEGRSRSSXXXXXXXXXXXXXXXXXXXXXKKQLVVMDEVDGMGGSDRGGIQELIALIKKAKVPIIAICNDRQHQKIRSLVNHCYDLRFQRPQKATIAKRVKAIAKMEGMDVDDNAAEMLVEANGNDIRQVLHALQMWSRKSSKLSYMNLKGGLAAIEKDKVQRCGPFEAARSILGGERTPLKERYEAFFTDYSLLPLLVHQNYPSSLMKIDPST--RTDVTMRAAAACSDADIISGKMRGDVQHWELLPAQAALNVRVGSIGAGSLGFPEFPKWLGNYSRENKRRRLLGELSTHLNASVSGGPEAVRLSYVHFLKTVLTRPLRERGAEGAQECVDMLEEYGLSRDDLFEIMPEFQLSSTGMKHPPPDVFGCLDGKTKSAVTRCYNSISHKSQALVEAM 707
            K+VP     CL GKTF  SG+LDSL RE A  L+K  GG VT SV+  T +L++G+ L+ G    E +KYK+A     +I+ ++  + ++ +                                   AA A       A+                E+ GAK+    S  GK   +SS    +N   ++W DK+KPQ    +IG+     KL+ WL +WE  H+K     P   K  +N GA+  LLSG PG+GK++ A LVA+E G+   ELNASDTR+K  L   L  V+G Q L F  + G+S+                        ++++VMDEVDGM G DRGG  ELI LIKK+K PII ICNDRQ QK+RSL NH +DLR +RP K  I KR+  I   EG+ ++ NA E   +  GNDIRQ+L  +Q W   ++K++Y ++    +   KD+  R  PF A + I   + +    R EA+F DY L+PL+V +NY  S+M    S+    +  M A+   S++D+++  +R + Q W+LL  QAA+NV      AG +G PEF KWLG  S  +K +RLL ELS  + +  SG  E +RL YV ++K +L + L   G E   E +++L+E  ++R+DL E M  F+    G+K      +  LD K K+A TR YN  SHKSQA+VE++
Sbjct:  157 KKVPAPCSGCLDGKTFAFSGLLDSLSREDAVHLVKSCGGSVTNSVTRSTKYLVIGATLEQGGKVTEAAKYKEAVAKSVRILTQNEFYNLITE-----------------------------------AAAAQQAQDLAAEKRRIK----------VEAAGAKT---TSTKGKQKLNSS----INN--ELWTDKYKPQTLDHMIGNIELGRKLKMWLMDWEAMHVKGTKKIPFTTKLSENRGAKTVLLSGPPGIGKTTIANLVARECGFECTELNASDTRSKKMLQTGLKDVLGTQALQFGVSTGKSKEKMHLA------------------RRVIVMDEVDGMSGGDRGGTAELIQLIKKSKTPIICICNDRQSQKVRSLANHSFDLRMRRPTKIQIGKRLMEIGLKEGLHMEKNAIEEAADRCGNDIRQLLTQMQRWRLTTTKITYADMVNPSSQHNKDESLRLNPFSATQQIFQRDLS-FDARNEAYFVDYDLMPLMVQENYIQSIMNNRTSSDENLEAAMHASEFISESDLLNTYVRVE-QRWDLLTKQAAMNVGACVYSAGFIGHPEFSKWLGKNSSASKSKRLLSELSVRMRSHASGSREVIRLDYVPYMKEILLKKLLS-GEENIHEVIELLDECEITREDLTESMESFKFP--GVKRHS---YSELDSKAKTAFTRMYNKASHKSQAVVESV 775          
BLAST of mRNA_H-paniculata_contig200.5129.1 vs. uniprot
Match: D0NZ13_PHYIT (Replication factor C subunit 1 n=5 Tax=Phytophthora TaxID=4783 RepID=D0NZ13_PHYIT)

HSP 1 Score: 413 bits (1061), Expect = 3.090e-128
Identity = 263/699 (37.63%), Postives = 375/699 (53.65%), Query Frame = 0
Query:   14 KEVPKGADQCLSGKTFVVSGVLDSLGREAAEDLIKEYGGKVTGSVSSKTAFLLLGSVLDDGRPPEEGSKYKKAQQHKTKIIDEDGLFKMLRDSNPGGRGSSASSTPTAASAATGASKKPGVANPYAKAAVANPYGSFTAKXXXXXXXXXXXXXXGAESGGAKSPAKVSRNGKGSSSSSTPSVLNKPGQMWVDKHKPQATKDIIGHTGQVTKLQTWLRNWENWHLKANGPKPPQGK--DNPGARAALLSGVPGVGKSSTATLVAKEMGYHVFELNASDTRNKSSLSVELASVIGNQCLNF-TAEGRSRSSXXXXXXXXXXXXXXXXXXXXXKKQLVVMDEVDGMGGSDRGGIQELIALIKKAKVPIIAICNDRQHQKIRSLVNHCYDLRFQRPQKATIAKRVKAIAKMEGMDVDDNAAEMLVEANGNDIRQVLHALQMWSRKSSKLSYMNLKGGLAAIEKDKVQRCGPFEAARSILGGERTPLKERYEAFFTDYSLLPLLVHQNYPSSLMKIDPST--RTDVTMRAAAACSDADIISGKMRGDVQHWELLPAQAALNVRVGSIGAGSLGFPEFPKWLGNYSRENKRRRLLGELSTHLNASVSGGPEAVRLSYVHFLKTVLTRPLRERGAEGAQECVDMLEEYGLSRDDLFEIMPEFQLSSTGMKHPPPDVFGCLDGKTKSAVTRCYNSISHKSQALVEAM 707
            K+VP     CL GKTF  SGVL+SL RE A  L+K  GG +  S++  T +L++GS L+ G    +GSKYK+A     +I+ ++  + ++ ++        A++  T   AA  A  K                                     AE+G  K+      + KG+   ST   +N   ++W DK+KPQ    +IG+     KL+TWL +WE  H+K     P   K  +N GA+  LLSG PG+GK++ A LVA+E G+   ELNASDTR+K  L   L  V+G Q L F  A G  +                        +++++MDEVDGM G DRGG  ELI L+KK+K PII ICNDRQ QK+RSL NH +DLR +RP K  I KR+  I   EG+ ++ NA E   +  GNDIRQ+L  +Q W   ++K++Y ++    +   KD+  R  PF A + I   E +    R EA+F DY L+PL+V +NY  S+M    S+    +  M A+   S++D+++  +R + Q W+LL  QAA+NV      AG +G PEF KWLG  S  +K +RLL ELS  + A  SG  E +RL YV ++K +L + L   G +   E +++L+E  +SR+DL E M  F+    G+K      +  LD K K+A TR YN  SHKSQA+VEA+
Sbjct:  202 KKVPAPCSGCLDGKTFAFSGVLESLSREDAVHLVKSCGGSIAISITRSTKYLVIGSTLEQGGNVTDGSKYKEAVAKNVRILTQNEFYNLITEA--------ATAQQTQDLAAEKAKIK-------------------------------------AETGALKT------SSKGNQKLST--SIND--ELWTDKYKPQTLNHMIGNIELGKKLKTWLLDWEAMHVKGTKKVPFSTKLSENRGAKTVLLSGPPGIGKTTIANLVARECGFACTELNASDTRSKKMLQTGLKDVLGTQALQFGAASGEFKEKMHLA------------------RRVIIMDEVDGMSGGDRGGTAELIQLLKKSKTPIICICNDRQSQKVRSLANHSFDLRMRRPTKVQIGKRLMEIGLNEGLHMEKNAVEEAADRCGNDIRQLLTQMQRWRLTTTKITYADMVNPSSQHNKDESLRLNPFSATQQIFQRELS-FDARNEAYFVDYDLMPLMVQENYIQSIMNNRRSSDENLEAAMHASEFISESDLLNTYVRVE-QRWDLLTKQAAMNVGACVYSAGFIGHPEFSKWLGKNSSASKSKRLLSELSVRMRAHASGSREVIRLDYVPYMKEILLKKLLS-GEDNIHEVIELLDECEISREDLTESMESFKFP--GVKRHS---YSELDTKAKTAFTRMYNKASHKSQAVVEAV 819          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig200.5129.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LND0_ECTSI0.000e+071.59Replication factor C subunit 1 n=2 Tax=Ectocarpus ... [more]
A0A1Z5JWY4_FISSO3.830e-14140.19Replication factor C subunit 1 n=2 Tax=Fistulifera... [more]
A0A835YT94_9STRA2.420e-14041.37P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S4IHD5_9STRA6.080e-13341.00Replication factor C subunit 1 (Fragment) n=2 Tax=... [more]
A0A7S2SF18_9STRA3.800e-13238.12Replication factor C subunit 1 n=1 Tax=labyrinthul... [more]
A0A812KXV0_9DINO1.730e-13138.40Replication factor C subunit 1 n=1 Tax=Symbiodiniu... [more]
A0A7S3JSX2_9STRA4.890e-13036.79Replication factor C subunit 1 (Fragment) n=1 Tax=... [more]
A0A7S3ZNL0_9STRA7.270e-12938.43Replication factor C subunit 1 n=3 Tax=Pelagomonas... [more]
H3GWA8_PHYRM1.060e-12837.34Replication factor C subunit 1 n=1 Tax=Phytophthor... [more]
D0NZ13_PHYIT3.090e-12837.63Replication factor C subunit 1 n=5 Tax=Phytophthor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 728..748
NoneNo IPR availableGENE3D1.10.8.60coord: 402..472
e-value: 1.9E-18
score: 67.9
NoneNo IPR availableGENE3D1.20.272.10coord: 476..578
e-value: 4.6E-16
score: 60.6
NoneNo IPR availableGENE3D3.40.50.300coord: 200..401
e-value: 3.8E-49
score: 169.2
NoneNo IPR availablePANTHERPTHR23389:SF6REPLICATION FACTOR C SUBUNIT 1coord: 3..762
NoneNo IPR availablePANTHERPTHR23389CHROMOSOME TRANSMISSION FIDELITY FACTOR 18coord: 3..762
IPR001357BRCT domainSMARTSM00292BRCT_7coord: 21..106
e-value: 1.7E-13
score: 60.8
IPR001357BRCT domainPFAMPF00533BRCTcoord: 23..103
e-value: 1.0E-13
score: 51.5
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 19..104
score: 11.865
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 252..405
e-value: 5.4E-6
score: 35.9
IPR012178Replication factor C subunit 1PIRSFPIRSF036578RFC1coord: 1..766
e-value: 1.2E-201
score: 670.0
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 257..399
e-value: 2.8E-11
score: 43.9
IPR036420BRCT domain superfamilyGENE3D3.40.50.10190coord: 3..106
e-value: 9.9E-31
score: 107.9
IPR036420BRCT domain superfamilySUPERFAMILY52113BRCT domaincoord: 21..104
IPR013725DNA replication factor RFC1, C-terminalPFAMPF08519RFC1coord: 538..695
e-value: 2.2E-38
score: 131.9
IPR008921DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminalSUPERFAMILY48019post-AAA+ oligomerization domain-likecoord: 476..604
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 200..455

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig200contigH-paniculata_contig200:650..19606 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig200.5129.1mRNA_H-paniculata_contig200.5129.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig200 7..19619 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig200.5129.1 ID=prot_H-paniculata_contig200.5129.1|Name=mRNA_H-paniculata_contig200.5129.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=767bp
MGGSRQAPPNEGNKEVPKGADQCLSGKTFVVSGVLDSLGREAAEDLIKEY
GGKVTGSVSSKTAFLLLGSVLDDGRPPEEGSKYKKAQQHKTKIIDEDGLF
KMLRDSNPGGRGSSASSTPTAASAATGASKKPGVANPYAKAAVANPYGSF
TAKKATPNPYAAMASKRGAESGGAKSPAKVSRNGKGSSSSSTPSVLNKPG
QMWVDKHKPQATKDIIGHTGQVTKLQTWLRNWENWHLKANGPKPPQGKDN
PGARAALLSGVPGVGKSSTATLVAKEMGYHVFELNASDTRNKSSLSVELA
SVIGNQCLNFTAEGRSRSSSSSSKKGGGSKKSSSSGGGGFKKQLVVMDEV
DGMGGSDRGGIQELIALIKKAKVPIIAICNDRQHQKIRSLVNHCYDLRFQ
RPQKATIAKRVKAIAKMEGMDVDDNAAEMLVEANGNDIRQVLHALQMWSR
KSSKLSYMNLKGGLAAIEKDKVQRCGPFEAARSILGGERTPLKERYEAFF
TDYSLLPLLVHQNYPSSLMKIDPSTRTDVTMRAAAACSDADIISGKMRGD
VQHWELLPAQAALNVRVGSIGAGSLGFPEFPKWLGNYSRENKRRRLLGEL
STHLNASVSGGPEAVRLSYVHFLKTVLTRPLRERGAEGAQECVDMLEEYG
LSRDDLFEIMPEFQLSSTGMKHPPPDVFGCLDGKTKSAVTRCYNSISHKS
QALVEAMQAPKKKKKAKAPPKSLAMESEEEDEEEEDEEEEDLSAFKKKGS
RGKATPKAKSKTKGKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001357BRCT_dom
IPR003593AAA+_ATPase
IPR012178RFC1
IPR003959ATPase_AAA_core
IPR036420BRCT_dom_sf
IPR013725DNA_replication_fac_RFC1_C
IPR008921DNA_pol3_clamp-load_cplx_C
IPR027417P-loop_NTPase