mRNA_H-paniculata_contig19977.5101.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig19977.5101.1 vs. uniprot
Match: A0A498M2F0_LABRO (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Labeo rohita TaxID=84645 RepID=A0A498M2F0_LABRO) HSP 1 Score: 284 bits (726), Expect = 5.030e-82 Identity = 220/729 (30.18%), Postives = 343/729 (47.05%), Query Frame = 1
Query: 4 GIKQEFSTTYIPQQNDVAERSRRSIFEMARANMITANKVCRNWAEAVRSAVCCLNRSPTQPHNGGTPYKKWHGETPKLDHLCVFSYTAYGS-SSCSRDASSTTAWAGVLLGHDEDSLIYRTNNPENKSVQLSRNVKFDEEDFVTGHRGQHGNIGESNGDSTMKDAEPAVEDATSA---------------GTAAPVSRGNTTEPSGTEAQRPRDRSIKGSRGGKWRAAMDKEWGALVENETWESKGPGRLLTGRKAIRTKWSFKRELKEDGNVARCKAQIVAQGFSQVEGEDFIETSAPVAHIPTLCAVFSLAAEYNFELEGMDVDAAYLNARVEQELFVKLPPEFSLSPET*NLCAACVKACTALSRR----NSTLDDFVVGIGLDHSTTDSCLYFSRDDGGETDLLVAIYIGDLVIAGHREK-VDEFKHNINQRFRMKDLGSLA---------------------------LKISAPESADKPSEPKSLGTILSDIGDGIQESGRGRSDNSIEYRGMVGLLMYASTGTAPDIAYAVHQAARHMEDPCREDFGICKRIFRYLSTVPDLGITF-----------------GDKSNGHGPEG----LNDGAIMWYSRKQQLVMWSSTAAEYVAAGEAGKETVYIGDLLGSIGFGCRASTTLFEDNKSAINLSKGSGPHCRIKHIGVRGRGIRE*IRERVLALKYAQTGDQLADILTKELSRVKFQSLRNL 1983
GI+ E + P+QN VAER +++ E R+ + A + WAEA+ +AV NRSPT+ G TP++ W GE PK+DHL +F T Y R A +LLG+ ++ YR + + V SR+V F+E + G N EP E++ G V+ TTEP + + KW+ AM+KE +L N W L GRKA+ +KW FK ++ DG R KA++VAQGFSQ G D+ ET +PV ++ + + A +Y +L MDV A+LN +++E++++ P F + + +L ++ L + N LD+ + +G +T D C+Y + GE ++A+Y+ D+++AG +K + E K + + F +KD+G L LK E++ S P + T L ++ S + +++ VG L+Y ST T PDIAYAV+ AR P ++ + KRI RYL +LG+ + GD+++ G ++ A+ W S+KQ V S+ AEY+A A +E V++ L+ + T +FEDN+SAI ++K S H R KHI ++ IRE I V+ L+Y T D +AD+ TK LS+ KF LR +
Sbjct: 34 GIRHELTVPKTPEQNGVAERMNKTLMETVRSMLADAKLPQKFWAEALSTAVYLRNRSPTKSVKGMTPFEAWTGEKPKVDHLRIFGCTVYAHVPKDERKKLDPKAKKCILLGYGTETKGYRLYDSKLAKVFFSRDVIFNESNHAFEKEPVANEDGAVNRYVEFDCQEPDNEESPEQKVQRSERLRKPPDYYGEWVTVASNPTTEPKTVKDV------LSSPDKAKWKEAMEKEMESLYANNVWNLV---ELPKGRKAVGSKWVFKVKVDADGTFERHKARLVAQGFSQKFGSDYDETFSPVVRFESVRTIIAQAVQYGLKLHQMDVKTAFLNGELKEEVYMQQPEGFVVKGKE-HLVCKLNRSIYGLKQSPRCWNIVLDEQLKKMGFVQTTGDPCIYTAAT--GEM-FIIAVYVDDILLAGCSDKRMMEVKKMLAKHFEIKDMGELTHFLGVKIIQKPETGEIWMGQATYAENVLKKFGMENSKPVSTPVDINTKL------VKHSDDSEVMDPKQFQSAVGSLLYLSTRTRPDIAYAVNNVARFCAKPTKQHWTAVKRIMRYLKGTLNLGLLYNKDKPKECIGFSDADWAGDQNDRKSMSGYMFQISGAAVSWRSKKQTCVALSTAEAEYMALASAAQEAVWMRQLMTDLKVNQAGPTVMFEDNQSAICMAKNSQFHGRAKHIDIKYHFIREKIAGGVIDLQYCNTDDMVADMFTKGLSQEKFVKLREM 743
BLAST of mRNA_H-paniculata_contig19977.5101.1 vs. uniprot
Match: A0A1J3IBS4_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3IBS4_NOCCA) HSP 1 Score: 285 bits (729), Expect = 2.830e-81 Identity = 224/739 (30.31%), Postives = 348/739 (47.09%), Query Frame = 1
Query: 4 GIKQEFSTTYIPQQNDVAERSRRSIFEMARANMITANKVCRNWAEAVRSAVCCLNRSPTQPHNGGTPYKKWHGETPKLDHLCVFSYTAYGSSSC-SRDASSTTAWAGVLLGHDEDSLIYRTNNPENKSVQLSRNVKFDEEDFVTGHRGQHGNIGE---SNGDSTMKDAEPAVEDATSAGTAAPVSRGN------------------------------TTEPSG-TEAQRPRDRSIKGSRGGKWRAAMDKEWGALVENETWESKGPGRLLTGRKAIRTKWSFKRELKEDGNVARCKAQIVAQGFSQVEGEDFIETSAPVAHIPTLCAVFSLAAEYNFELEGMDVDAAYLNARVEQELFVKLPPEFSLSPET*NLCAACVKACTALSRRN----STLDDFVVGIGLDHSTTDSCLYFSRDDGGETDLLVAIYIGDLVIAGH-REKVDEFKHNINQRFRMKDLGSL----ALKISAPESADKPSEPKSLGTILS--------------DIGDGIQ-ESGRGRSDNSIEYRGMVGLLMYASTGTAPDIAYAVHQAARHMEDPCREDFGICKRIFRYLSTVPDLGITFGD---------------------KSNGHGPEGLNDGAIMWYSRKQQLVMWSSTAAEYVAAGEAGKETVYIGDLLGSIGFGCRASTTLFEDNKSAINLSKGSGPHCRIKHIGVRGRGIRE*IRERVLALKYAQTGDQLADILTKELSRVKFQSLRN 1980
GI E +T Y P+QN VAER R++ EMAR+ + N + WAE+VR+AV LN SPT+ TPY+ W G P + HL VF AY +R + + LG+ S YR NP + + SRNV FDEE G +G + E N D + P +A + + P S T++P+ TEA D WR AMD+E ++ +N TW+ L G+ +I KW FK + DG++ + KA++V +G++Q G D+ ET +PVA T+ + +L A ++ + DV +A+LN + +E++V P F + + KA L + + +D F V G + S ++ LY + G+ L+V +Y+ DL+ G V +FK ++ ++F M DLG L L++ E S+ K +L +I + +Q + G G++D + +R +VG L+Y T T PDI++AV +R M P R+ FG KR+ RY++ + G+ + KS L GA+ W S+KQ + SS+ AEY AA A + V++ +L + +TT+F DNK+ I ++K H R KHI ++ IR+ + E +AL+Y T +Q AD+LTK LS+ KF R+
Sbjct: 164 GIHHELTTAYTPEQNGVAERKNRTVVEMARSMLKQKNLPNQFWAESVRTAVYLLNISPTKAVLNRTPYEAWCGRKPGVSHLRVFGSIAYSLIDAHNRKKLDDKSEKCIFLGYSSQSKGYRLYNPVSGKIIESRNVTFDEETVWRLREGDNGELEEIVVDNNDEQVVSESPVGSEANTPTNSVPNSXXXXXXXXXXXXSNAPQKFRSLQEIYEVQHAFFTSDPTMFTEAAEKED----------WRKAMDEEITSIEKNSTWQLV---ELPEGKHSIGVKWVFKTKYHADGSIQKYKARLVVKGYAQEYGVDYEETFSPVARFDTVRTLLALGAHMHWPIYQFDVKSAFLNGELLEEVYVDQPEGFVVRGKE-GFVYKLHKALYGLKQAPRAWYNKIDLFFVESGFERSRSEPTLYIKKQSEGDI-LIVCLYVDDLIYMGSCASLVADFKDSMMKKFEMSDLGLLHFFLGLEVKQVEDGIFVSQQKYAMDLLRRFNMTNCNVEETPMNINEKLQKDDGTGKAD-ATRFRSLVGGLIYL-THTRPDISFAVSAISRFMHCPTRQHFGAAKRLLRYIAATTEFGLWYNTVSEFELVGFTDSDWAGCVQDRKSTSGHVFNLGSGAVCWSSKKQNVTALSSSEAEYTAATSAACQAVWLRRILEDVKQEQLKATTIFCDNKATIAMTKNPAYHGRTKHISIKVHFIRDLVNEGSVALEYCSTNEQRADVLTKALSKSKFDYFRS 885
BLAST of mRNA_H-paniculata_contig19977.5101.1 vs. uniprot
Match: A0A151T355_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151T355_CAJCA) HSP 1 Score: 285 bits (729), Expect = 1.450e-79 Identity = 210/715 (29.37%), Postives = 347/715 (48.53%), Query Frame = 1
Query: 4 GIKQEFSTTYIPQQNDVAERSRRSIFEMARANMITANKVCRNWAEAVRSAVCCLNRSPTQPHNGGTPYKKWHGETPKLDHLCVFSYTAYGS-SSCSRDASSTTAWAGVLLGHDEDSLIYRTNNPENKSVQLSRNVKFDE----------EDFVTGHRGQHGNIGESNGDSTMKDAEPAVEDATSAGTAAPVSRGNTTEPSGTEAQRPRDRSIKGSRGGKWRAAMDKEWGALVENETWESKGPGRLLTGRKAIRTKWSFKRELKEDGNVARCKAQIVAQGFSQVEGEDFIETSAPVAHIPTLCAVFSLAAEYNFELEGMDVDAAYLNARVEQELFVKLPPEFSLSPET*NLCAACVKACTALSRRN----STLDDFVVGIGLDHSTTDSCLYFSRDDGGETDLLVAIYIGDLVIAGHR-EKVDEFKHNINQRFRMKDLGS----LALKISAPESADKPSEPKSLGTILSD--------------IGDGIQESGRGRSDNSIEYRGMVGLLMYASTGTAPDIAYAVHQAARHMEDPCREDFGICKRIFRYLSTVPDLGITFGDKSNGHGPEGLND----------------------GAIMWYSRKQQLVMWSSTAAEYVAAGEAGKETVYIGDLLGSIGFGCRASTTLFEDNKSAINLSKGSGPHCRIKHIGVRGRGIRE*IRERVLALKYAQTGDQLADILTKELSRVKFQSLRN 1980
GI+ + + Y PQQN V+ER R++ EMAR + WAEAV ++V LN PT+ G TP++ WHG TP ++HL VF Y RD + G+ LG+ S YR NP K + +SRNVKFDE + + + N+ E N +S ++ + +D GT E A P++ + G WR AM +E + +N TW+ +K I KW ++ +L DG+V + KA++V +G+ Q G DF++T APVA T+ + +LAA++ +++ DV +A+LN +E++++V P F + N KA L + + +D++++ G + S ++ LY R E L++++Y+ D+++ G + + +FKH++ F M DLG L ++I ++ S+ K + IL I + + + ++ YR ++G L+Y S T PDI +A +R M P + +G KR+ RYL D G+ F +G +G D G W S+KQ++V SS AEY++A A +++ +L + +T ++ DNKSAI ++K + R KHI V+ IRE + + ++LK+ + +Q+ADI+TK LS+ KF+ LR+
Sbjct: 542 GIQHQLTVPYTPQQNGVSERKNRTVMEMARCLLFEKGLPKTFWAEAVNTSVYLLNLLPTKALKGNTPFEAWHGRTPSVEHLKVFGCVCYALVPEVKRDKLDQKSEVGIFLGYSSYSKGYRIYNPATKKILVSRNVKFDELSRWNWEKSKAEASNKRQLEVDNLQEQNSESEEQNLDD--DDFPVRGTR---DLAEIYERCNVAALEPKEYAEAAELEG-WRVAMQEEMNMIEKNNTWQLVD---RPINQKVIGLKWVYRTKLNYDGSVNKLKARLVVKGYHQQYGVDFLDTFAPVARHDTIRMLVALAAKFGWKIYHFDVKSAFLNGFLEEDIYVDQPEGFQVKGSE-NKVYKLHKALYGLKQAPRAWYTRIDNYLLQKGFERSENEATLYVKRSQN-EVKLIISLYVDDMLVIGSDFDSLRQFKHDMENEFEMSDLGQMNYFLGMEIYQCDAGIFISQRKYVLEILKKFHMEKCKPVDTPLVINEKLSLNDAIAKVDASLYRSLIGSLLYLSA-TRPDIMFAASLLSRFMHSPSQAHYGAAKRVLRYLKGTTDYGLWFLQNESGE-LQGYADSDWAGSIDDSKSTSGYVFSFGSGVFTWNSKKQEVVAQSSAEAEYISAAAAANHAIWLRKILCDVKQHQNEATIIWVDNKSAIAIAKNPVQYGRTKHIKVKYHAIREAEKSKEVSLKHCSSENQIADIMTKALSKSKFEMLRS 1243
BLAST of mRNA_H-paniculata_contig19977.5101.1 vs. uniprot
Match: A0A6S7HEL0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 (Fragment) n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HEL0_PARCT) HSP 1 Score: 281 bits (718), Expect = 4.960e-78 Identity = 216/724 (29.83%), Postives = 341/724 (47.10%), Query Frame = 1
Query: 4 GIKQEFSTTYIPQQNDVAERSRRSIFEMARANMITANKVCRNWAEAVRSAVCCLNRSPTQPHNGGTPYKKWHGETPKLDHLCVFSYTAYGSSSCSRDASSTTAWAGVLLGHDEDSLIYRTNNPENKSVQLSRNVKFDEEDFVTGHRGQHGNIGESNGDSTMK---DAEPAVEDATSAGTA-----------APVSRGNTTEPSGTEAQRPR--DRSIKGSRGGKWRAAMDKEWGALVENETWESKGPGRLLTGRKAIRTKWSFKRELKEDGNVARCKAQIVAQGFSQVEGEDFIETSAPVAHIPTLCAVFSLAAEYNFELEGMDVDAAYLNARVEQELFVKLPPEFSLSPET*NLCAACVKACTALSRR----NSTLDDFVVGIGLDHSTTDSCLYFSRDDGGETDLLVAIYIGDLVIAGHR-EKVDEFKHNINQRFRMKDLGSL----ALKISAPESADKPSEPKSLGTILSDIG------------------DGIQESGRGRSDNSIEYRGMVGLLMYASTGTAPDIAYAVHQAARHMEDPCREDFGICKRIFRYLSTVPDLGITF-----------------GDKSNGHGPEG----LNDGAIMWYSRKQQLVMWSSTAAEYVAAGEAGKETVYIGDLLGSIGFGCRASTTLFEDNKSAINLSKGSGPHCRIKHIGVRGRGIRE*IRERVLALKYAQTGDQLADILTKELSRVKFQSLRNL 1983
G+K E S P+QN VAER R++ E R +I + + W EA+ +AV NRSPT+ TP++ W G P + HL F T Y + DE + N V SR+VKF+E +F + GN +++ T++ D + VED + AP G + + P ++ G +W AM +E +L E++ WE L RKA+ KW FK + DG++ R KA++VAQGFSQ G D+ ET +PV + V +L+ + +L MDV AA+LN +E E+++K P F + + +L K+ L + NS LD+ + IG + +D C+Y +DG +VAI++ D+++AG EK+ + K +I +RF++KD+G L L++ ++ +P +I+ G I++S N EY+ VG L+Y S+ T PDI +AV+ A+ +P E + KRIFRYL + G+ + GD ++ G +N A+ W S+KQ V S+ AEYVA A +E +++ LL + T++EDN+SAI +SK H R KHI ++ +R+ + ++ L + Y TG LAD+ TK + + +F+ LR L
Sbjct: 569 GVKHELSVPKTPEQNGVAERLNRTLIEAVRGMLIQSKLPQKFWVEALSTAVYLHNRSPTKGVANMTPFEAWTGVKPDVKHLRSFGCTVYAH-----------------IPKDERKKLDSKAKKCNSRVIYSRDVKFNESEFGI-EKELPGNEFQADKHVTLELSNDNDVVVEDDQADNAEINERQPVRERRAPDRFGEWVTIASKDVVEPTTVSEALCGPNAERWHEAMQQEMDSLQEHDVWELT---ELPKDRKAVGCKWVFKVKHNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFEKIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKE-HLVCKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGDI--FVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQEDAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAIEDS---ELFNKEEYQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANPDCVGFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAEAEYVALSAAAQEALWMRQLLTDLNVNIDEPMTIYEDNQSAIAMSKNPQFHGRSKHIDIKYHFVRDQVEKKTLTVLYCPTGSMLADLFTKGIPKEQFKKLREL 1265
BLAST of mRNA_H-paniculata_contig19977.5101.1 vs. uniprot
Match: A0A0K8WJW9_BACLA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=2 Tax=Bactrocera latifrons TaxID=174628 RepID=A0A0K8WJW9_BACLA) HSP 1 Score: 271 bits (693), Expect = 7.990e-75 Identity = 221/760 (29.08%), Postives = 345/760 (45.39%), Query Frame = 1
Query: 4 GIKQEFSTTYIPQQNDVAERSRRSIFEMARANMITANKVCRNWAEAVRSAVCCLNRSPTQPHNGGTPYKKWHGETPKLDHLCVFSYTAYGSSSCSRDASSTTAWAGVLLGHDEDSLIYRTNNPENKSVQLSRNVKFDEEDFVTG--------------------------HRGQHGNIGESNGDSTMKDAEPAVEDATSAGTAAPVS-------------RG----------------------NTTEPSGTEAQRPRDRSIKGSRGGKWRAAMDKEWGALVENETWESKGPGRLLTGRKAIRTKWSFKRELKEDGNVARCKAQIVAQGFSQVEGEDFIETSAPVAHIPTLCAVFSLAAEYNFELEGMDVDAAYLNARVEQELFVKLPPEFSLSPET*NLCAACVKACTALSRR----NSTLDDFVVGIGLDHSTTDSCLYFSRDDGGETDLLVAIYIGDLVIAGHRE-KVDEFKHNINQRFRMKDLGS------LALKISAPESADKPSEPKSLGTILSDIG------------DGIQESGRGRSD---NSIEYRGMVGLLMYASTGTAPDIAYAVHQAARHMEDPCREDFGICKRIFRYLSTVPDLGITF----------------GDKSNGHGPEG----LNDGAIMWYSRKQQLVMWSSTAAEYVAAGEAGKETVYIGDLLGSIGFGCRASTTLFEDNKSAINLSKGSGPHCRIKHIGVRGRGIRE*IRERVLALKYAQTGDQLADILTKELSRVK 1962
GIK+E + Y PQQN VAER+ R+I EMA++ +I AN WAEAV++AV NR PT+ N TP++ W P + HL +F A+ ++ + +G+ + YR + + + + R+VKF E +F T + N+GE + +D E AT++ + A S RG N+TE T Q P + ++ G +WR +M E+ AL+ N TW L G+KAI +KW ++ + GN+ + K+++VA+G Q G ++ ET +PV T+ +F++AAE + +D+ AYLN+++E+ +F+K P F +S + KA L + N+TLD + IG + CLY + ++ + +A+Y+ DL+I E ++ E K I +F+M D G+ L ++ + A + K + ++ G G Q ++ N+ EY+ ++G LMY + + PDI +AV + +RH DP E K I RYLS D+ I + D S+ G L + W S KQ + SST AEYVA A KE +Y+ LL IG+ TL+ DN SA ++++ H R KHI ++ IRE + + LKY T +ADILTK LSR K
Sbjct: 440 GIKRELTVPYTPQQNGVAERANRTIVEMAKSLLIHANLGQFLWAEAVQTAVYLRNRCPTKALNSRTPFEVWKQRKPSVKHLRIFGSRAFALDKTNKGKFDAKGREYIFVGYSNTAKAYRLYDQQRRIIVERRDVKFIEGEFNTSITSEISSSQCNGDFATNIIRLKSPENEQSATENVGEREMKNDFEDLNEEDEFATASDSEAEQSATSSEQDELPKRGRGRPKYIRTGQPGRPKKHFQLLNVNSTEDDETP-QSPTE-ALSGQHAVEWRKSMQLEYDALIANNTWSLVD---LPKGQKAIGSKWVYRIKRDASGNINKFKSRLVAKGCGQQLGVNYWETFSPVIRYETIRMLFAIAAEKELYMHHIDISNAYLNSKLEENIFMKQPEGF-ISKKYPEKVLKLQKAIYGLKQSGRVWNTTLDAVLTSIGFKRCRHEPCLYVNNNNQQYS--YIAVYVDDLIIICPSENEIAEIKKKITAKFQMHDYGTVSDFLGLEIQRKGEKGAISLHQKKYIRAVIDSFGMQNCRATATPLDPGFQVGCTDKNCVKVNATEYQSLIGSLMYLAVLSRPDILHAVSKLSRHNTDPHIEHEAAAKHILRYLSGTIDMSIEYCKTGEDVKGFADADWANDSSDRKSYTGYAFYLGGSSFSWSSTKQNITALSSTEAEYVALAMAAKEAIYLSRLLSEIGWSSSTPITLYGDNISAQHIARNPIHHKRTKHIDIKYHFIREKVENNEINLKYVSTDKNVADILTKSLSRQK 1191
BLAST of mRNA_H-paniculata_contig19977.5101.1 vs. uniprot
Match: A0A7M6DPI8_9CNID (Uncharacterized protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M6DPI8_9CNID) HSP 1 Score: 268 bits (686), Expect = 1.130e-73 Identity = 213/740 (28.78%), Postives = 353/740 (47.70%), Query Frame = 1
Query: 4 GIKQEFSTTYIPQQNDVAERSRRSIFEMARANMITANKVCRNWAEAVRSAVCCLNRSPTQPHNGGTPYKKWHGET-PKLDHLCVFSYTAYGSSSCSR-----DASSTTAWAGVLLGHDEDSLIYRTNNPENKSVQLSRNVKFDEEDF-VTGHRGQHGNIG---ESNGDSTMKDAEPAVEDATSAGTAAPVSRGNTT-------------------EPSGTEAQRPRDRSIKGSRGGKWRAAMDKEWGALVENETWE--SKGPGRLLTGRKAIRTKWSFKRELKEDGNVARCKAQIVAQGFSQVEGEDFIETSAPVAHIPTLCAVFSLAAEYNFELEGMDVDAAYLNARVEQELFVKLPPEFSLSPET*NLCAACVKACTALSRR----NSTLDDFVVGIGLDHSTTDSCLYFSRDDGGETD--LLVAIYIGDLVIAGHREKV-DEFKHNINQRFRMKDLGSLALKISAPESADKPSEPKS------LGTILS--------DIGDGIQESGRGRS---DNSI----EYRGMVGLLMYASTGTAPDIAYAVHQAARHMEDPCREDFGICKRIFRYLSTVPDLGITFGDKSNG----HG---------------PEG----LNDGAIMWYSRKQQLVMWSSTAAEYVAAGEAGKETVYIGDLLGSIGFGCRASTTLFEDNKSAINLSKGSGPHCRIKHIGVRGRGIRE*IRERVLALKYAQTGDQLADILTKELSRVKFQSLR 1977
GI +E + Y PQQN VAER R++ E AR+ + A K + WAEA+ +A NRSPT TPY+ WH + P + +L VF +Y ++ D S + + +G+ + ++ +P+ + + SR+V F E+DF + G + N ES +D +A T P R N EP+ E ++ W+ A+ E+ +L+ENETW+ P + L G +KW FK + DG + RCKA++VAQG+SQ G D+ + APVA ++ +V ++ E + EL MDV A+LN +E+++F+K P F ++ + N+ K+ L + N +D+F+ G + D C+Y + G+ L+VA+Y+ DL+IA + ++ E K + +RF M+D + + D+ + + L ++L+ + ++ S + D I +Y+ +G L YAS GT PDI+ AV ++HM P ++ + KR+ RYL D G+ + +G HG G + + + W S++Q +V S T AEYVA +A +E +++ L + F T +FEDN+ AI L+K H R KHI ++ +R+ + ++V+ L+Y T + +AD+LTK L R +F+ LR
Sbjct: 563 GISREPTIPYSPQQNGVAERMNRTLLETARSMLHHAQKPIKFWAEAISTACYVRNRSPTAFLKETTPYEIWHRKKKPDVSNLKVFGCKSYVHVPDTKRKGKFDKKSISC---IFVGYPSNENGFKFYDPQTRKMFRSRDVTFVEKDFDIEKFDGTNSNFEFFPESTEPDEPEDNXXXXXNARPVRTRRPPERLNVLTGEWWNLIDAASIAIVDEEEPTTIE------EALSSPNAELWKDAIQNEYDSLIENETWKLVEMPPDKNLVG-----SKWVFKHKRGADGKIQRCKARLVAQGYSQKSGIDYNDVFAPVAKYNSIRSVLAITNELDLELHQMDVKTAFLNGDLEEDIFMKQPEGF-INRDNPNMACKLQKSIYGLKQSARCWNEKMDEFLKESGFTRNDADPCIYHKQITKGDKSFTLIVAVYVDDLLIACNNIQILREQKQKLGERFEMEDKSEVHFILGMQVKRDRKNRRLTIDQNAFLSSVLNRFNMNECKPVATPLEPSMKFEKLADDEEIVKLKDYQSAIGCLTYASIGTRPDISAAVGVLSQHMSKPGKQHWIGVKRVLRYLKGTLDYGLIYEGSESGDILLHGFADADWAGDIDTRKSTSGYVFKVGNSTVSWKSKRQSIVALSKTEAEYVALSQATQEVIWLRTLFKGMDFEQTDPTKMFEDNQGAIELAKNQPNHSRTKHIDIKFHHVRDAVAKKVIDLEYCPTDEMIADLLTKGLPRPQFEKLR 1287
BLAST of mRNA_H-paniculata_contig19977.5101.1 vs. uniprot
Match: A0A5S6QN85_TRIMR (Integrase catalytic domain-containing protein n=2 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6QN85_TRIMR) HSP 1 Score: 260 bits (664), Expect = 2.650e-72 Identity = 227/747 (30.39%), Postives = 339/747 (45.38%), Query Frame = 1
Query: 4 GIKQEFSTTYIPQQNDVAERSRRSIFEMARANMITANKVCRNWAEAVRSAVCCLNRSPTQPHNGGTPYKKWHGETPKLDHLCVFSYTAYGSSSCSRDAS-STTAWAGVLLGHDEDSLIYRTNNPENKSVQLSRNVKFDEE-------------DFVTGHRGQHGNIGESNGDSTMKD-----AEPAVE--------DATSAGTAAPVSR------------GNTTEPSGTEA--QRP-RDRSIKGSRGGKWRAAMDKEWGALVENETWESKGPGRLLTGRKAIRTKWSFKRELKEDGNVARCKAQIVAQGFSQVEGEDFIETSAPVAHIPTLCAVFSLAAEYNFELEGMDVDAAYLNARVEQELFVKLPPEFSLSPET*NLCAACVKACTALSRR----NSTLDDFVVGIGLDHSTTDSCLYFSRDDGGETDLLVAIYIGDLVIAGHREKVD-EFKHNINQRFRMKDLGS----LALKISAPESAD---------------------KPSEPKSLGTILSDIGDGIQESGRGRSDNSIEYRGMVGLLMYASTGTAPDIAYAVHQAARHMEDPCREDFGICKRIFRYLSTVPDLGITF-----------------GDKSNGHGPEG----LNDGAIMWYSRKQQLVMWSSTAAEYVAAGEAGKETVYIGDLLGSIGFGCRASTTLFEDNKSAINLSKGSGPHCRIKHIGVRGRGIRE*IRERVLALKYAQTGDQLADILTKELSRVKF 1965
GI+ + + Y PQQN VAER RS+ EMAR ++ A R W EA+ +A NR P++ TPY+ ++G P + HL VF AY R S +A GVL+G+ + YR +P+ V SR+ E D QH + S D AEP+ E + +A A R +T EP E Q P ++R KW A++ E +L +++ WE L G++ I KW FK + + GN+ KA++VA+GFSQ++G D+ ET APV T+ +F++AA N + +DV AYLN ++++ELF++ PP FS P T ++ L + N D + +G + D CL FSR++ T V +Y+ DL+IAG ++ + +N F +KDLG L +++ E KP LS +E DN+ EYR +G L+Y +T T PDI++AV Q R ME P + D+ KR+ RYL+ P + F GD ++ G + + W SRKQ V SST AEYVAA EA ++ ++I +L IG T ++EDN+ I +++ R KHI +R +RE ++AL Y + + AD+LTK L++ KF
Sbjct: 130 GIEHQLTVPYTPQQNGVAERKNRSLIEMARCMLLDAGLSKRFWGEAIITAAYLQNRLPSRSVEC-TPYEHFYGSKPAVSHLRVFGSKAYSLIPKERRRKLSQSAMEGVLVGYGNTTKGYRLLDPKTARVWYSRSAHIVESPQQLSVLHERKRPDAPINRPLQHKMVNLDEWGSFKNDWADVPAEPSSERQELPRRSERLAAKEAEVTERWSNKDYVWKVIKDDTKEPMTWEEMLQLPIKERE-------KWMEAVNAELMSLEKHKVWEIAD---LPPGKRTISAKWVFKAKRDDQGNIHTYKARLVARGFSQIQGRDYDETFAPVVRHETVRILFAVAAMKNMHVRHVDVKTAYLNGKLDEELFLEPPPGFS-QPTTDGKVLRLRRSLYGLKQSARVWNQVATDALQKLGFRPNRADPCL-FSRNEKNNTMSYVLLYVDDLLIAGSSPELTCDVGKQLNSYFEIKDLGEVRQYLGMQVEREEDGSFLLYQAAKVRHLLKEHGLLDAKPVATPMEANFLSST----EEESPKLPDNA-EYRKAIGSLLYLATATRPDISFAVGQLCRCMEHPTQRDWKAVKRVMRYLAGSPYRKLRFSANGSIKLSGFVDADWAGDHADRKSTSGYAFKVGTSTVAWSSRKQSFVALSSTEAEYVAASEACRDLLWIRQVLEDIGIKQVEPTIVYEDNQGCIKMAQSERHTRRTKHIDIRYHQLRELQESGIIALTYCPSNEMPADMLTKPLTKDKF 858
BLAST of mRNA_H-paniculata_contig19977.5101.1 vs. uniprot
Match: A0A0J7K6W1_LASNI (Gag-pol polyprotein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K6W1_LASNI) HSP 1 Score: 262 bits (669), Expect = 2.280e-71 Identity = 218/751 (29.03%), Postives = 339/751 (45.14%), Query Frame = 1
Query: 4 GIKQEFSTTYIPQQNDVAERSRRSIFEMARANMITANKVCRNWAEAVRSAVCCLNRSPTQPHNGGTPYKKWHGETPKLDHLCVFSYTAYGS-SSCSRDASSTTAWAGVLLGHDEDSLIYRTNNPENKSVQLSRNVKFDEEDF--VTGHRGQHGNIGESNG----DSTMKDAEPAVEDATSAGTAAPVSRGNTTEPSGTEAQRPRDRSIKGSRGG---------------------------------KWRAAMDKEWGALVENETWESKGPGRLLTGRKAIRTKWSFKRELKEDGNVARCKAQIVAQGFSQVEGEDFIETSAPVAHIPTLCAVFSLAAEYNFELEGMDVDAAYLNARVEQELFVKLPPEFSLSPET*NLCAACVKACTALSRR----NSTLDDFVVGIGLDHSTTDSCLYFSRDDGGETDLLVAIYIGDLVIAGHREKVDE-FKHNINQRFRMKDLGSLA--LKISAPESAD-----------------------KP-SEPKSLGTILSDIGDGIQESGRGRSDNSIEYRGMVGLLMYASTGTAPDIAYAVHQAARHMEDPCREDFGICKRIFRYLSTVPDLGITF-----------------GDKSNGHGPEG----LNDGAIMWYSRKQQLVMWSSTAAEYVAAGEAGKETVYIGDLLGSIGFGCRASTTLFEDNKSAINLSKGSGPHCRIKHIGVRGRGIRE*IRERVLALKYAQTGDQLADILTKELSRVKFQSLRN 1980
GI+ + + Y PQQN VAER R + E A+ ++ AN R W EA+ +A NR ++ N TP + + GE P + H+ VF Y R A GVL+G+D ++ YR +P + +SR+V+ E D + H+ E +G D M + + T + S PS + PR R + + G W A ++E +L E++TWE L G+KAI KW FK +L +G V KA++VA+GFSQ GED+ ET APV T+ + +AA + +DV +AYLN ++E+E+F++ PP F + +K+ L + N ++ + +G D CLY ++ G T V +Y+ DL++AG +V + ++ + F +KDLG++ L I AD KP + P G + S+ D I + N+ +YR +G L+Y +T + PDIA AV R +E+P D+ KR+ RYL++ D + GDK++ G L +G + W SRKQ V SST AEY+AA A KE +++ LL + T + EDN+ I+L + R KHI VR IR+ ++++ ++Y + LAD+LTK L++ +F L N
Sbjct: 576 GIQHQLTVVYTPQQNGVAERKNRFLTETAKCMLLDANLDNRFWGEAILTATYLQNRMISRSINK-TPVELFTGEKPNISHIRVFGSKVYSLIPKQKRRKWDDKAEEGVLVGYDGNTKGYRILDPNTNRIWISRSVRIIEHDANQFSLHQTSQKEKAEIDGIKMIDYDMSETNHEEASRSEVETESNASDEEYEMPSSVTPETPRRRVSQRTNKGIPPQRLVYKVQTNSIKEPESWAKMLQLPLRERQSWITAAEEEIKSLNEHQTWELTD---LPPGKKAITCKWVFKAKLDSEGQVHTYKARLVARGFSQRYGEDYDETFAPVVKHETIRILLLVAAHKGLHVRHLDVKSAYLNGKLEEEIFLEQPPGFQKRGHE-SKVLRLLKSLYGLKQSARAWNKRANEALAQLGFQSKNADQCLYTRKEKGNNT-TYVLLYVDDLLVAGTSAEVTQKVSKDLQRHFNIKDLGNVNHYLGIQIEREADGSFLLSQKGKISKMLEEYGLLEPKPMATPMETGFLSSEADDSI------KLPNNSQYRKAIGSLLYIATVSRPDIALAVGILCRCVENPTERDWKAVKRVMRYLASTIDKKLQLSSFGKTELECFVDADWAGDKTDRKSTSGYVFRLGNGTVAWSSRKQTTVAMSSTEAEYIAASYASKELLWLRQLLKDMNIPAEGPTIINEDNQGCIHLIESDRCEARTKHIHVRYHQIRDLREKKIIDVRYCPSHTMLADLLTKPLAKERFLELTN 1314
BLAST of mRNA_H-paniculata_contig19977.5101.1 vs. uniprot
Match: W8C3B0_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8C3B0_CERCA) HSP 1 Score: 256 bits (654), Expect = 4.410e-71 Identity = 212/736 (28.80%), Postives = 333/736 (45.24%), Query Frame = 1
Query: 4 GIKQEFSTTYIPQQNDVAERSRRSIFEMARANMITANKVCRNWAEAVRSAVCCLNRSPTQPHNGGTPYKKWHGETPKLDHLCVFSYTAYGSSSCSRDASSTTAWAGVLLGHDEDSLIYRTNNPENKSVQLSRNVKFDEEDFVTGHRGQHGNIGESN-----------GDSTMKDAEPAVEDATSAGTAAPVSRGNTTEPSGTEAQRPR------------------DRSIKGSRGGKWRAAMDKEWGALVENETWESKGPGRLLTGRKAIRTKWSFKRELKEDGNVARCKAQIVAQGFSQVEGEDFIETSAPVAHIPTLCAVFSLAAEYNFELEGMDVDAAYLNARVEQELFVKLPPEFSLSPET*NLCAACVKACTALSRR----NSTLDDFVVGIGLDHSTTDSCLYFSRDDGGETDLLVAIYIGDLVIAG-HREKVDEFKHNINQRFRMKDLG--SLALKISAPESADKPS-------------------EPKSLGTILSDIGDGIQ--ESGRGRSDNSIEYRGMVGLLMYASTGTAPDIAYAVHQAARHMEDPCREDFGICKRIFRYLSTVPDLGITF----------------GDKSNGHGPEG----LNDGAIMWYSRKQQLVMWSSTAAEYVAAGEAGKETVYIGDLLGSIGFGCRASTTLFEDNKSAINLSKGSGPHCRIKHIGVRGRGIRE*IRERVLALKYAQTGDQLADILTKELSRVKFQSLRN 1980
GI +F+ Y PQQN VAER R++ EMAR ++ AN WAEAV +A NRS T+ TPY+ W+ P + H F AY + + V++G+D + YR + K + +SR+V F E I E N ++++ D E A E+ + G + RP+ D+++ +WR AM +E+ AL++NETW L K I+ KW F + ++G + R KA++VA+G SQ+ G ++ +T +PV T+ +F+LAAEY L +DV A+LN +V+ ++++ P F +S + N KA L + N L + +V IG T+ C+Y ++ G + +LL A+Y+ DL+IA H++++ K I++ F++ D G L L + + +K + E + + T L D I +S R D EY+ ++G L+Y + T PDI + V + A+ +P E KR+ RYL D + + G+ G L A+ W S+KQ V SST AEY+A A KE +++ L I C + DN SAI+L K H R KHI +R IR+ + + L+Y + D +AD+LTK LS++ N
Sbjct: 106 GILHQFTVPYTPQQNGVAERFNRTLVEMARCMLVGANLSEYLWAEAVNTAAYLRNRSTTKALEVMTPYEAWYKRKPVVSHFKTFGSIAYALNKKPKGKFEAKGKKYVMVGYDSAAKAYRLFDLATKGIIVSRDVSFIEPSISKECASVELEILECNEAEVNDNNIEVANNSLSDYESAQEENEEESDIQRIGPGRPKLVRSGKPGRPKKEYHLLNLLCDVDIPNTVDQAMASEYADEWRKAMREEYQALLDNETWNLVD---LPENEKVIKCKWVFAVKKNKEGEINRFKARLVAKGCSQIYGVNYTDTFSPVVRYSTIRIIFALAAEYELYLHHVDVSTAFLNGKVDDDIYMAQPEAF-VSRDHPNKVLKLKKALYGLKQAGRQWNVKLHEILVKIGFKQCVTEPCVY-TKHHGDKINLL-AVYVDDLLIASSHKQELQFIKQQISKYFQVVDKGPVELFLSMEVERNGEKGAIAIRQKGHIKQLLQQHNMLECRPIATPL-DAKQQINCIDSECKRVDKQ-EYQSLIGSLLYLALCTRPDIMHTVCKLAQQNSEPHSEHLAAAKRVLRYLCFTTDFALRYYKTGSSIQCYADADWGGESFERKSYTGYVFLLAGCAVSWESKKQSTVALSSTEAEYIALSSAAKEVMFLKQFLEEIKQHCIDKIVIRGDNLSAIHLVKNPVYHTRCKHIEIRYHHIRDMYNKNFIDLEYCSSKDNIADVLTKNLSKLNHNDFVN 833
BLAST of mRNA_H-paniculata_contig19977.5101.1 vs. uniprot
Match: A0A7D9HZ03_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HZ03_PARCT) HSP 1 Score: 251 bits (641), Expect = 1.280e-70 Identity = 195/657 (29.68%), Postives = 316/657 (48.10%), Query Frame = 1
Query: 199 TPYKKWHGETPKLDHLCVFSYTAYGS-SSCSRDASSTTAWAGVLLGHDEDSLIYRTNNPENKSVQLSRNVKFDEEDFVTGHRGQHGNIGESNGDSTMK---DAEPAVEDATSAGTA-----------APVSRGNTTEPSGTEAQRPR--DRSIKGSRGGKWRAAMDKEWGALVENETWESKGPGRLLTGRKAIRTKWSFKRELKEDGNVARCKAQIVAQGFSQVEGEDFIETSAPVAHIPTLCAVFSLAAEYNFELEGMDVDAAYLNARVEQELFVKLPPEFSLSPET*NLCAACVKACTALSRR----NSTLDDFVVGIGLDHSTTDSCLYFSRDDGGETDLLVAIYIGDLVIAGHR-EKVDEFKHNINQRFRMKDLGSL----ALKISAPESADKPSEPKSLGTILSDIG-----------DGIQESGRGRSDNSI----EYRGMVGLLMYASTGTAPDIAYAVHQAARHMEDPCREDFGICKRIFRYLSTVPDLGITF-----------------GDKSNGHGPEG----LNDGAIMWYSRKQQLVMWSSTAAEYVAAGEAGKETVYIGDLLGSIGFGCRASTTLFEDNKSAINLSKGSGPHCRIKHIGVRGRGIRE*IRERVLALKYAQTGDQLADILTKELSRVKFQSLRNL 1983
TP + W G P + HL F Y R + A V LG+ ++ YR +P+N V SR+VKF+E +F + GN +++ T++ D + VED + AP G + + P ++ G +W AM +E +L E++ WE L RKA+ KW FK + DG++ R KA++VAQGFSQ G D+ ET +PV ++ V +L+ + +L MDV AA+LN +E E+++K P F + + +L K+ L + NS LD+ + IG + +D C+Y +DG +VAI++ D+++AG EK+ + K +I +RF++KD+G L L++ ++ +P +I+ G D + D+ + E++ VG L+Y S+ T PDI +AV+ A+ +P E + KRIFRYL + G+ + GD ++ G +N A+ W S+KQ V S+ AAEYVA A +E +++ LL + T++EDN+SAI +SK H R KHI ++ +R+ + ++ L + Y TG LAD+ TK + + +F+ LR L
Sbjct: 2 TPIEAWTGVKPDVKHLRSFGCIVYAHIPKDERKKLDSKAKKCVPLGYGTETKGYRLYDPQNSRVIYSRDVKFNESEFGI-EKELPGNEFQADKHVTLELSNDNDVVVEDDQADNAEINERQPVRERRAPDRFGEWVTIASKDVVEPTTVSEALCGPNAERWHEAMQQEMDSLQEHDVWELT---ELPKDRKAVGCKWVFKVKHNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFESIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKE-HLACKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGNI--FVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQEDAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAMEDSELFNKEEHQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANPDCVGFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAAAEYVALSAAAQEALWMRQLLTDLNVNIDEPMTIYEDNQSAIAMSKNPQFHGRSKHIDIKYYFVRDQVEKKTLTVLYCPTGSMLADLFTKGIPKEQFKKLREL 651 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19977.5101.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig19977.5101.1 >prot_H-paniculata_contig19977.5101.1 ID=prot_H-paniculata_contig19977.5101.1|Name=mRNA_H-paniculata_contig19977.5101.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=310bp MARANMITANKVCRNWAEAVRSAVCCLNRSPTQPHNGGTPYKKWHGETPKback to top mRNA from alignment at H-paniculata_contig19977:685..3184- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig19977.5101.1 ID=mRNA_H-paniculata_contig19977.5101.1|Name=mRNA_H-paniculata_contig19977.5101.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2500bp|location=Sequence derived from alignment at H-paniculata_contig19977:685..3184- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig19977:685..3184- >mRNA_H-paniculata_contig19977.5101.1 ID=mRNA_H-paniculata_contig19977.5101.1|Name=mRNA_H-paniculata_contig19977.5101.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1860bp|location=Sequence derived from alignment at H-paniculata_contig19977:685..3184- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |