mRNA_H-paniculata_contig19959.5096.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig19959.5096.1
Unique NamemRNA_H-paniculata_contig19959.5096.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig19959.5096.1 vs. uniprot
Match: A0A6H5KGS8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGS8_9PHAE)

HSP 1 Score: 223 bits (568), Expect = 5.760e-66
Identity = 121/309 (39.16%), Postives = 189/309 (61.17%), Query Frame = 1
Query:    1 IGMRWVFKVKADGRFKARLVVQGWSQKHGVKCGSTFAPVCRLESQRLLLALATAKDWTVFALDVQVAFLNGKLKESVFCKQAPGFEKTHPTTGQPYVMRSNHTYIMLSLFVDDILVTGPTDRLLMDVRNKLMNKCTITDLGEVSLILGMEVLRNKQTGTLQLSQHKYVLSVLDRFNISSANPTKTPGVKTDSTTTTSEDSQLLDAAATKEYQAMVGGLIFLTQCTRFDICFSVIQAAHYMSAPTQQHLVAVKRIFRYLQGHPDVPITYSRCEPKLLGYSDASYCT-----LSTTGAMFSLPTDWYTSHL 912
            +G ++VFK K DGRFKARLVV G  Q+ G   G ++APVCR+ S R+  A+    +W ++ LD+  AFLN      V+ + APG    +  TG+P V    +  ++L+++VDDIL+TG   +L+   + +L ++  +TD+GEV  ILG++V R+ + GTL +SQ  YV ++L+RF +  ANP  TPG   + +T   +D Q+L     K YQ+M G +++L QCTRFD+ ++ +Q +   S P Q ++ A K + RYL+G+P +PI Y R + +L  ++D+S+        STTG + SL + W T  L
Sbjct:   25 LGTKFVFKKKLDGRFKARLVVGGHRQEPGQDYGRSYAPVCRIGSIRMTCAIGCHNNWPIYQLDIVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMV---GNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQD-QILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYI-SLLSGWRTHQL 328          
BLAST of mRNA_H-paniculata_contig19959.5096.1 vs. uniprot
Match: A0A6H5KE92_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE92_9PHAE)

HSP 1 Score: 212 bits (540), Expect = 1.140e-57
Identity = 121/341 (35.48%), Postives = 187/341 (54.84%), Query Frame = 1
Query:    1 IGMRWVFKVKADGRFKARLVVQGWSQKHGVKCGSTFAPVCRLESQRLLLALATAKDWTVFALDVQVAFLNGKLKESVFCKQAPGFEKTHPTTGQP-----------------------------------------YVMRSNHTYIMLSLFVDDILVTGPTDRLLMDVRNKLMNKCTITDLGEVSLILGMEVLRNKQTGTLQLSQHKYVLSVLDRFNISSANPTKTPGVKTDSTTTTSEDSQLLDAAATKEYQAMVGGLIFLTQCTRFDICFSVIQAAHYMSAPTQQHLVAVKRIFRYLQGHPDVPITYSRCEPKLLGYSDASYCT-----LSTTGAMFSL 885
            +G ++VFK K DGRFKARLVV G  Q+ G   G ++APVCR+ S R+  A+    +W ++ LDV  AFLN      V+ + APG    +  TG+P                                         YV  S +  ++L+++VDDIL+TG   +L+   + +L ++  +TD+GEV  ILG++V R+ + GTL +SQ  YV ++L+RF +  ANP  TPG   + +T   +D Q+L     K YQ+M G +++L QCTRFD+ ++ +Q +   S P Q ++ A K + RYL+G+P +PI Y R + +L  ++D+S+        STTG +F L
Sbjct:  389 LGTKFVFKKKLDGRFKARLVVGGHRQEPGQDYGRSYAPVCRIGSIRMTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQD-QILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFL 728          
BLAST of mRNA_H-paniculata_contig19959.5096.1 vs. uniprot
Match: A0A6H5JF89_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF89_9PHAE)

HSP 1 Score: 210 bits (534), Expect = 1.280e-57
Identity = 120/341 (35.19%), Postives = 186/341 (54.55%), Query Frame = 1
Query:    1 IGMRWVFKVKADGRFKARLVVQGWSQKHGVKCGSTFAPVCRLESQRLLLALATAKDWTVFALDVQVAFLNGKLKESVFCKQAPGFEKTHPTTGQP-----------------------------------------YVMRSNHTYIMLSLFVDDILVTGPTDRLLMDVRNKLMNKCTITDLGEVSLILGMEVLRNKQTGTLQLSQHKYVLSVLDRFNISSANPTKTPGVKTDSTTTTSEDSQLLDAAATKEYQAMVGGLIFLTQCTRFDICFSVIQAAHYMSAPTQQHLVAVKRIFRYLQGHPDVPITYSRCEPKLLGYSDASYCT-----LSTTGAMFSL 885
            +G ++VFK   DGRFKARLVV G  Q+ G   G ++APVCR+ S R+  A+    +W ++ LDV  AFLN      V+ + APG    +  TG+P                                         YV  S +  ++L+++VDDIL+TG   +L+   + +L ++  +TD+GEV  ILG++V R+ + GTL +SQ  YV ++L+RF +  ANP  TPG   + +T   +D Q+L     K YQ+M G +++L QCTRFD+ ++ +Q +   S P Q ++ A K + RYL+G+P +PI Y R + +L  ++D+S+        STTG +F L
Sbjct:  233 LGTKFVFKKTLDGRFKARLVVGGHRQEPGQDYGRSYAPVCRIGSIRMTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSHALWNDTLDESLTVLGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQD-QILGPTDKKIYQSMAGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFL 572          
BLAST of mRNA_H-paniculata_contig19959.5096.1 vs. uniprot
Match: A0A6H5KQD0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQD0_9PHAE)

HSP 1 Score: 204 bits (520), Expect = 3.070e-57
Identity = 119/341 (34.90%), Postives = 185/341 (54.25%), Query Frame = 1
Query:    1 IGMRWVFKVKADGRFKARLVVQGWSQKHGVKCGSTFAPVCRLESQRLLLALATAKDWTVFALDVQVAFLNGKLKESVFCKQAPGFEKTHPTTGQP-----------------------------------------YVMRSNHTYIMLSLFVDDILVTGPTDRLLMDVRNKLMNKCTITDLGEVSLILGMEVLRNKQTGTLQLSQHKYVLSVLDRFNISSANPTKTPGVKTDSTTTTSEDSQLLDAAATKEYQAMVGGLIFLTQCTRFDICFSVIQAAHYMSAPTQQHLVAVKRIFRYLQGHPDVPITYSRCEPKLLGYSDASYCT-----LSTTGAMFSL 885
            +G ++VFK K DGRFKARLVV G  Q+ G   G ++APVCR+ S R+  A+    +W ++ LDV  AFLN      V+ + APG    +  TG+P                                         YV  S +  ++L+++VDDIL+TG   +L+   + +L ++  +TD+GEV  ILG++V R+ + GTL +SQ  YV + L+RF +  ANP  T G   + +T   +D Q+L     K YQ+M G +++L QCT+FD+ ++ +Q +   S P Q ++ A K + RYL+G+P +PI Y R + +L  ++D+S+        STTG +F L
Sbjct:   25 LGTKFVFKKKLDGRFKARLVVGGHRQEPGQDYGRSYAPVCRIGSIRMTCAIGCHNNWPIYQLDVVGAFLNALCDRYVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTRLERFGMQEANPVSTLGYGAEISTNQPQD-QILGPTDKKIYQSMTGSILYLAQCTQFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFL 364          
BLAST of mRNA_H-paniculata_contig19959.5096.1 vs. uniprot
Match: A0A6H5KY84_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY84_9PHAE)

HSP 1 Score: 212 bits (539), Expect = 7.600e-57
Identity = 117/324 (36.11%), Postives = 179/324 (55.25%), Query Frame = 1
Query:    1 IGMRWVFKVKADGRFKARLVVQGWSQKHGVKCGSTFAPVCRLESQRLLLALATAKDWTVFALDVQVAFLNGKLKESVFCKQAPGFEKTHPTTGQPYVMR-----------------------------------------SNHTYIMLSLFVDDILVTGPTDRLLMDVRNKLMNKCTITDLGEVSLILGMEVLRNKQTGTLQLSQHKYVLSVLDRFNISSANPTKTPGVKTDSTTTTSEDSQLLDAAATKEYQAMVGGLIFLTQCTRFDICFSVIQAAHYMSAPTQQHLVAVKRIFRYLQGHPDVPITYSRCEPKLLGYSDASY 849
            IG RW++K+KA G  KARL+VQGW Q+HG+ CG T+APV R  SQ +L+A+A  + + V  +DV  AFL   ++E V+ +QA G+E T   TG P VM+                                         +  TY +L ++VDD  + G T  ++ D++ +L +K  +TD G   L+LGME+  ++  G + +SQHKYV+++LD++ +    P  TPG   +      E++  L     K YQ +VG L+FLT  TR++I ++V+     M+ PT QH+V  KR+ RYL+G PD+P+ + R +  L  Y DAS+
Sbjct:  937 IGSRWLYKMKATGVMKARLIVQGWGQRHGIDCGGTYAPVSRFSSQLVLMAIAAERGYVVETMDVVTAFLQSNVEEEVYVRQAKGYEITDEVTGLPLVMKLKKSLYGLKQSPRNFGNAFAKGIKEIGFTALLSDPCVYVYGAGPTYAILCVYVDDCTLAGKTPSVVQDLKKQLSDKFKMTDGGPAELLLGMEI--SQSDGEIIVSQHKYVMNILDKYQMVDCKPAATPGSGPE-IEQEPENAIYLSEEDKKLYQGIVGSLLFLTNTTRWEIGYAVMVLCRGMNKPTNQHMVGAKRVLRYLRGCPDMPLKFRRGQWDLKCYCDASF 1257          
BLAST of mRNA_H-paniculata_contig19959.5096.1 vs. uniprot
Match: A0A6H5JF46_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF46_9PHAE)

HSP 1 Score: 206 bits (524), Expect = 5.260e-56
Identity = 121/338 (35.80%), Postives = 179/338 (52.96%), Query Frame = 1
Query:   10 RWVFKVKADGRFKARLVVQGWSQKHGVKCGSTFAPVCRLESQRLLLALATAKDWTVFALDVQVAFLNGKLKESVFCKQAPGFEKTHPTTGQP-----------------------------------------YVMRSNHTYIMLSLFVDDILVTGPTDRLLMDVRNKLMNKCTITDLGEVSLILGMEVLRNKQTGTLQLSQHKYVLSVLDRFNISSANPTKTPGVKTDSTTTTSEDSQLLDAAATKEYQAMVGGLIFLTQCTRFDICFSVIQAAHYMSAPTQQHLVAVKRIFRYLQGHPDVPITYSRCEPKLLGYSDASYCT-----LSTTGAMFSL 885
            R+VFK+KAD RFKARLV  G  Q+ G   G  +APV RL S R+L A+A    W V+ LDV  AFLN      V+ + APG E+  PTTG+                                          Y+  S     +L+++VDDIL+TG    ++   + +LM+   +TD+GEV  ++G+EV R+ + GTL +SQ  Y   +L R+ +  ANP  TPG   + +T   +D QLL     + +QA+ G L++L QCTR+D+ ++V Q     + P Q H+ A K + RYL+G PD+PI Y + + +L  ++D+S+        STTG +F L
Sbjct:  269 RFVFKIKADSRFKARLVAGGHRQRAGRHFGRNYAPVTRLGSIRMLFAIACEHGWEVYQLDVVAAFLNAYTDRDVYVRPAPGDEERDPTTGEMMVYKLEKSLYGLSQSPSLWNDAINDRLIIFGWQRTRSDPCVYIFVSGDELTILAIYVDDILITGGNKEIVSRKKKELMDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGVELSTEQPQD-QLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGKFRLSCFTDSSFGANPDNGRSTTGYLFFL 605          
BLAST of mRNA_H-paniculata_contig19959.5096.1 vs. uniprot
Match: A0A6H5JDU8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDU8_9PHAE)

HSP 1 Score: 202 bits (515), Expect = 5.450e-56
Identity = 121/341 (35.48%), Postives = 185/341 (54.25%), Query Frame = 1
Query:    1 IGMRWVFKVKADGRFKARLVVQGWSQKHGVKCGSTFAPVCRLESQRLLLALATAKDWTVFALDVQVAFLNGKLKESVFCKQAPGFEKTHPTTGQP-----------------------------------------YVMRSNHTYIMLSLFVDDILVTGPTDRLLMDVRNKLMNKCTITDLGEVSLILGMEVLRNKQTGTLQLSQHKYVLSVLDRFNISSANPTKTPGVKTDSTTTTSEDSQLLDAAATKEYQAMVGGLIFLTQCTRFDICFSVIQAAHYMSAPTQQHLVAVKRIFRYLQGHPDVPITYSRCEPKLLGYSDASYCT-----LSTTGAMFSL 885
            +G ++VFK K DGRFKA LVV G  Q+ G   GS++APVCR+ S R+   +    +W ++ LDV VAFLN      V+ + APG    +  TG+P                                         Y+  S +  ++L+++VDDIL+TG  D+ L+D + +L ++  +TD+GEV  ILG++V R+ + GTL +SQ  YV ++L+RF +  ANP  T G   + +T   +D Q+L     K YQ+M   +++L QCTRFD+ ++ +Q +   S P Q +L A K + RYL+G+P +PI Y R +  L   +D+S+        STTG +F L
Sbjct:  126 LGTKFVFKKKLDGRFKAHLVVGGHRQEPGQDYGSSYAPVCRIGSIRMTCTIGCHNNWPIYQLDVVVAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLNESLKVFGWKRTQYDPCVYMYTSGNIIVILTVYVDDILITGG-DQQLVDQKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEYYVNTLLERFGMQEANPVSTLGYGAEISTNQPQD-QILGPTDKKIYQSMTRSILYLAQCTRFDLSYAALQLSKACSNPAQVNLTAAKHVLRYLRGNPVLPIVYKRGQFWLAASTDSSFGANLDNGRSTTGYLFFL 464          
BLAST of mRNA_H-paniculata_contig19959.5096.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 208 bits (529), Expect = 1.780e-55
Identity = 120/330 (36.36%), Postives = 175/330 (53.03%), Query Frame = 1
Query:    1 IGMRWVFKVKADGRFKARLVVQGWSQKHGVKCGSTFAPVCRLESQRLLLALATAKDWTVFALDVQVAFLNGKLKESVFCKQAPGFEKTHPTTGQP----------------------------------------YVMRSNHTYIMLSLFVDDILVTGPTDRLLMDVRNKLMNKCTITDLGEVSLILGMEVLRNKQTGTLQLSQHKYVLSVLDRFNISSANPTKTPGVKTDSTTTTSEDSQLLDAAATKEYQAMVGGLIFLTQCTRFDICFSVIQAAHYMSAPTQQHLVAVKRIFRYLQGHPDVPITYSRCEPKLLGYSDASYCTLSTTG 870
            I  +WVFK KADG FK R+V QGW+Q  G+ CGST+APVCR++S R++  +    +     +DV  AFL   ++E VF +Q PGFE      G                                          Y+   N   I L+L+VDD+L+ G     +  V+ KL  +  +TDLGE SL+LGME+ R+++  TL +SQ  Y  S+L+RF IS + PT TPG  ++ +    ED+ LLD   T++YQ +VG L+++ Q  R+DI ++  Q A  M+ P++ H+VA K   RYL G  D  ITY +   KL  +SD+++      G
Sbjct: 1198 IKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGISGSKPTSTPGYGSEISNIQPEDT-LLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNG 1526          
BLAST of mRNA_H-paniculata_contig19959.5096.1 vs. uniprot
Match: A0A6H5KDK0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDK0_9PHAE)

HSP 1 Score: 198 bits (503), Expect = 1.860e-54
Identity = 114/324 (35.19%), Postives = 176/324 (54.32%), Query Frame = 1
Query:    1 IGMRWVFKVKADGRFKARLVVQGWSQKHGVKCGSTFAPVCRLESQRLLLALATAKDWTVFALDVQVAFLNGKLKESVFCKQAPGFEKTHPTTGQP------------------------YVMRSNHTYIMLSLFVDDILVTGPTDRLLMDVRNKLMNKCTITDLGEVSLILGMEVLRNKQTGTLQLSQHKYVLSVLDRFNISSANPTKTPGVKTDSTTTTSEDSQLLDAAATKEYQAMVGGLIFLTQCTRFDICFSVIQAAHYMSAPTQQHLVAVKRIFRYLQGHPDVPITYSRCEPKLLGYSDASYCT-----LSTTGAMFSL 885
            +G ++VFK   DGRFKARLVV G+ Q+ G   G ++APVCR+   R+  A+    +W ++ LDV  AFLN      V+ + APG    +  TG+P                        YV  S +  ++L+++VDDIL+TG   +L+   + +L ++  +TD+GEV  ILG++V R+ + GTL +SQ  YV ++L+RF +  ANP                  Q+L     K YQ+M G ++ L QCTRFD+ ++ +Q +   S P Q ++ A K   RYL+G+P +PI Y R + +L  ++D+S+        STTG +F L
Sbjct:   25 LGTKFVFKKDLDGRFKARLVVGGYRQEPGQDYGRSYAPVCRIGGIRMTCAIGCHHNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANP-----------------DQILGPTDKKIYQSMTGSILNLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHDVRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFL 331          
BLAST of mRNA_H-paniculata_contig19959.5096.1 vs. uniprot
Match: A0A6H5KL37_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL37_9PHAE)

HSP 1 Score: 198 bits (503), Expect = 1.380e-52
Identity = 116/332 (34.94%), Postives = 169/332 (50.90%), Query Frame = 1
Query:    1 IGMRWVFKVKADGRFKARLVVQGWSQKHGVKCGSTFAPVCRLESQRLLLALATAKDWTVFALDVQVAFLNGKLKESVFCKQAPGFEKTHPTTGQ----------------------------------------PYVMRSNHTYIMLSLFVDDILVTGPTDRLLMDVRNKLMNKCTITDLGEVSLILGMEVLRNKQTGTLQLSQHKYVLSVLDRFNISSANPTKTPGVKTDSTTTTSEDSQLLDAAATKEYQAMVGGLIFLTQCTRFDICFSVIQAAHYMSAPTQQHLVAVKRIFRYLQGHPDVPITYSRCEPKLLGYSDASYCTLSTTGAM 876
            I  +WVFK KA G FK RLV QGW+Q  G+ CG+T+APVCR +S R+L  +A   +  +  +DV  AFL   + E+VF +Q PGFE      G                                          Y+   +   + L+L+VDD+L+ G   R +  ++ KL  +  +TD+GEV L+LGME+ R++  GTL +SQ  Y  S+L+RF +S   PT TPG  ++ +    ED+ LL    T+ YQ +VG LI++ Q  R+DI ++  Q    M+ P++ H+VA K   RY+ G  D  ITY         +S A  CT    G +
Sbjct:  506 IKSKWVFKRKAGGSFKGRLVAQGWNQVPGLDCGNTYAPVCRFQSIRMLACIAVQFNLELDQMDVSTAFLYADILENVFVEQPPGFEVKDKDGGDLVMQLQKSLYGLAQSPSNWFHTIDPFLVEIGFVPLKSDTCVYLYDHDDVQVYLTLYVDDLLLAGNNSRAISMIKKKLTQRFKMTDMGEVKLVLGMEIKRDRNQGTLTISQEAYSKSILERFGMSECKPTSTPGYGSELSNKQPEDT-LLSEEETRRYQGIVGCLIYIAQVLRYDIMYATGQLTRPMAKPSKIHMVAAKHTLRYVAGTTDFRITYGPFGQIFKIFSPAQRCTFLGVGVL 836          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19959.5096.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KGS8_9PHAE5.760e-6639.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KE92_9PHAE1.140e-5735.48Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JF89_9PHAE1.280e-5735.19Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KQD0_9PHAE3.070e-5734.90Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KY84_9PHAE7.600e-5736.11Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JF46_9PHAE5.260e-5635.80Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JDU8_9PHAE5.450e-5635.48Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KJH6_9PHAE1.780e-5536.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDK0_9PHAE1.860e-5435.19Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KL37_9PHAE1.380e-5234.94Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig19959contigH-paniculata_contig19959:2332..3707 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score166.8
Seed ortholog evalue1.6e-38
Seed eggNOG ortholog981085.XP_010091283.1
KEGG koko:K05665,ko:K05666,ko:K05670
KEGG TC3.A.1.208,3.A.1.208.2,3.A.1.208.8
KEGG Pathwayko01523,ko01524,ko02010,ko04071,ko04976,ko04977,ko05206,map01523,map01524,map02010,map04071,map04976,map04977,map05206
Hectar predicted targeting categorymitochondrion
GOsGO:0000325,GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005911,GO:0006810,GO:0008150,GO:0009506,GO:0009605,GO:0009607,GO:0009624,GO:0015399,GO:0015405,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0030054,GO:0031090,GO:0042623,GO:0042626,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0051704,GO:0051707,GO:0055044,GO:0055085,GO:0098588,GO:0098805
EggNOG free text desc.ABC transporter C family member
EggNOG OGs37PYD@33090,3G8VE@35493,4JDGI@91835,COG1132@1,COG2801@1,KOG0017@2759,KOG0054@2759
COG Functional cat.Q
Best tax levelfabids
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000
Exons2
Model size1253
Cds size921
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig19959.5096.1prot_H-paniculata_contig19959.5096.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig19959 2338..3381 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929504.2903388-UTR-H-paniculata_contig19959:2331..23371622929504.2903388-UTR-H-paniculata_contig19959:2331..2337Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig19959 2332..2337 +
1691480889.5557094-UTR-H-paniculata_contig19959:2331..23371691480889.5557094-UTR-H-paniculata_contig19959:2331..2337Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig19959 2332..2337 +
1622929504.3447204-UTR-H-paniculata_contig19959:3381..37071622929504.3447204-UTR-H-paniculata_contig19959:3381..3707Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig19959 3382..3707 +
1691480889.591461-UTR-H-paniculata_contig19959:3381..37071691480889.591461-UTR-H-paniculata_contig19959:3381..3707Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig19959 3382..3707 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929504.304511-CDS-H-paniculata_contig19959:2337..26261622929504.304511-CDS-H-paniculata_contig19959:2337..2626Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19959 2338..2626 +
1691480889.5672636-CDS-H-paniculata_contig19959:2337..26261691480889.5672636-CDS-H-paniculata_contig19959:2337..2626Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19959 2338..2626 +
1622929504.32303-CDS-H-paniculata_contig19959:2749..33811622929504.32303-CDS-H-paniculata_contig19959:2749..3381Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19959 2750..3381 +
1691480889.5769243-CDS-H-paniculata_contig19959:2749..33811691480889.5769243-CDS-H-paniculata_contig19959:2749..3381Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19959 2750..3381 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig19959.5096.1

>prot_H-paniculata_contig19959.5096.1 ID=prot_H-paniculata_contig19959.5096.1|Name=mRNA_H-paniculata_contig19959.5096.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=307bp
MRWVFKVKADGRFKARLVVQGWSQKHGVKCGSTFAPVCRLESQRLLLALA
TAKDWTVFALDVQVAFLNGKLKESVFCKQAPGFEKTHPTTGQPYVMRSNH
TYIMLSLFVDDILVTGPTDRLLMDVRNKLMNKCTITDLGEVSLILGMEVL
RNKQTGTLQLSQHKYVLSVLDRFNISSANPTKTPGVKTDSTTTTSEDSQL
LDAAATKEYQAMVGGLIFLTQCTRFDICFSVIQAAHYMSAPTQQHLVAVK
RIFRYLQGHPDVPITYSRCEPKLLGYSDASYCTLSTTGAMFSLPTDWYTS
HLDYRR*
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mRNA from alignment at H-paniculata_contig19959:2332..3707+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig19959.5096.1 ID=mRNA_H-paniculata_contig19959.5096.1|Name=mRNA_H-paniculata_contig19959.5096.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1376bp|location=Sequence derived from alignment at H-paniculata_contig19959:2332..3707+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATTGGCATGCGCTGGGTATTTAAAGTAAAAGCAGACGGAAGATTCAAGGC TCGGCTCGTGGTACAAGGCTGGTCGCAAAAACATGGGGTTAAATGCGGGA GTACCTTTGCACCTGTATGCAGACTGGAGAGCCAGCGACTACTGCTAGCA CTAGCGACGGCAAAGGATTGGACCGTATTTGCACTAGATGTTCAAGTTGC TTTTCTAAACGGCAAGCTGAAGGAGAGCGTCTTCTGCAAACAAGCTCCTG GTTTTGAGAAGACTCACCCTACTACTGGACAACCTTACGTGATGAGTTTG AAGAACTCGATATATGGGTTGCGCCCAAGCCCAAATGTGTGGAATCATAC AATCGACAACGAGCTGAGGAGCATGGGTTTTACACCAACTGTCTCGGACC CCTGTGTCTACAGTAAAGGAAGCAACCACACCTACATTATGCTTAGTCTT TTCGTCGACGATATACTAGTGACAGGACCAACGGACAGGCTGCTAATGGA CGTGCGCAACAAGCTGATGAATAAATGTACTATCACGGACCTTGGAGAAG TATCGCTTATACTTGGGATGGAAGTACTACGCAACAAACAGACCGGCACT CTACAGCTATCACAGCACAAGTATGTACTATCTGTTTTGGACAGGTTCAA CATATCATCAGCGAATCCCACGAAAACACCTGGAGTTAAAACGGACTCCA CTACTACTACTAGCGAAGACAGTCAACTACTGGATGCAGCAGCTACAAAG GAATATCAAGCCATGGTAGGGGGACTCATCTTCTTGACCCAGTGTACAAG ATTCGACATCTGCTTCAGCGTCATCCAAGCGGCACACTACATGAGCGCAC CAACTCAACAGCATCTAGTCGCAGTAAAGCGGATTTTTCGGTATTTACAG GGTCACCCAGATGTTCCCATCACGTACAGCAGATGTGAGCCGAAACTCCT CGGCTATTCTGATGCATCATACTGCACACTGTCTACAACAGGCGCTATGT TCTCTTTGCCAACGGATTGGTACACTTCTCATCTCGACTACAGAAGATAA CGGCTACAAGCATAACTGAGGCAGATCTCATCGCACTGGCTACATGCGCA AAACAAGGCATTTACCTTCTGGATATCTGCAGGGAGCTGGGTCTTCAACT GACTAGCTGCGAGGTTCGAAGTGACAACCGGGGAGCTCTTCATCTCGCGG CCAACAGCAATTACTCAAGCCGCAGCAAACACATCGCCATCAGCTTCGCA GCACTGAAAGACTGGATCAGGAGACATCAGCTTATCATCGACCATGTGCC AAGTACTGATCAGCTAGCTGACATTCTCACCAAACACTGCGAAAGAGTGT TATTCGCCCAACTACGGAGCAAAATA
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Coding sequence (CDS) from alignment at H-paniculata_contig19959:2332..3707+

>mRNA_H-paniculata_contig19959.5096.1 ID=mRNA_H-paniculata_contig19959.5096.1|Name=mRNA_H-paniculata_contig19959.5096.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1842bp|location=Sequence derived from alignment at H-paniculata_contig19959:2332..3707+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCGCTGGGTATTTAAAGTAAAAGCAGACGGAAGATTCAAGGCTCGGCT
CGTGGTACAAGGCTGGTCGCAAAAACATGGGGTTAAATGCGGGAGTACCT
TTGCACCTGTATGCAGACTGGAGAGCCAGCGACTACTGCTAGCACTAGCG
ACGGCAAAGGATTGGACCGTATTTGCACTAGATGTTCAAGTTGCTTTTCT
AAACGGCAAGCTGAAGGAGAGCGTCTTCTGCAAACAAGCTCCTGGTTTTG
AGAAGACTCACCCTACTACTGGACAACCTTACGTGATGAATGCGCTGGGT
ATTTAAAGTAAAAGCAGACGGAAGATTCAAGGCTCGGCTCGTGGTACAAG
GCTGGTCGCAAAAACATGGGGTTAAATGCGGGAGTACCTTTGCACCTGTA
TGCAGACTGGAGAGCCAGCGACTACTGCTAGCACTAGCGACGGCAAAGGA
TTGGACCGTATTTGCACTAGATGTTCAAGTTGCTTTTCTAAACGGCAAGC
TGAAGGAGAGCGTCTTCTGCAAACAAGCTCCTGGTTTTGAGAAGACTCAC
CCTACTACTGGACAACCTTACGTGATGAGAAGCAACCACACCTACATTAT
GCTTAGTCTTTTCGTCGACGATATACTAGTGACAGGACCAACGGACAGGC
TGCTAATGGACGTGCGCAACAAGCTGATGAATAAATGTACTATCACGGAC
CTTGGAGAAGTATCGCTTATACTTGGGATGGAAGTACTACGCAACAAACA
GACCGGCACTCTACAGCTATCACAGCACAAGTATGTACTATCTGTTTTGG
ACAGGTTCAACATATCATCAGCGAATCCCACGAAAACACCTGGAGTTAAA
ACGGACTCCACTACTACTACTAGCGAAGACAGTCAACTACTGGATGCAGC
AGCTACAAAGGAATATCAAGCCATGGTAGGGGGACTCATCTTCTTGACCC
AGTGTACAAGATTCGACATCTGCTTCAGCGTCATCCAAGCGGCACACTAC
ATGAGCGCACCAACTCAACAGCATCTAGTCGCAGTAAAGCGGATTTTTCG
GTATTTACAGGGTCACCCAGATGTTCCCATCACGTACAGCAGATGTGAGC
CGAAACTCCTCGGCTATTCTGATGCATCATACTGCACACTGTCTACAACA
GGCGCTATGTTCTCTTTGCCAACGGATTGGTACACTTCTCATCTCGACTA
CAGAAGATAAGAAGCAACCACACCTACATTATGCTTAGTCTTTTCGTCGA
CGATATACTAGTGACAGGACCAACGGACAGGCTGCTAATGGACGTGCGCA
ACAAGCTGATGAATAAATGTACTATCACGGACCTTGGAGAAGTATCGCTT
ATACTTGGGATGGAAGTACTACGCAACAAACAGACCGGCACTCTACAGCT
ATCACAGCACAAGTATGTACTATCTGTTTTGGACAGGTTCAACATATCAT
CAGCGAATCCCACGAAAACACCTGGAGTTAAAACGGACTCCACTACTACT
ACTAGCGAAGACAGTCAACTACTGGATGCAGCAGCTACAAAGGAATATCA
AGCCATGGTAGGGGGACTCATCTTCTTGACCCAGTGTACAAGATTCGACA
TCTGCTTCAGCGTCATCCAAGCGGCACACTACATGAGCGCACCAACTCAA
CAGCATCTAGTCGCAGTAAAGCGGATTTTTCGGTATTTACAGGGTCACCC
AGATGTTCCCATCACGTACAGCAGATGTGAGCCGAAACTCCTCGGCTATT
CTGATGCATCATACTGCACACTGTCTACAACAGGCGCTATGTTCTCTTTG
CCAACGGATTGGTACACTTCTCATCTCGACTACAGAAGATAA
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