mRNA_H-paniculata_contig19899.5083.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig19899.5083.1 vs. uniprot
Match: D7FXA7_ECTSI (FPL domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA7_ECTSI) HSP 1 Score: 103 bits (256), Expect = 2.340e-23 Identity = 81/197 (41.12%), Postives = 85/197 (43.15%), Query Frame = 1
Query: 7 NVGKNSSLFYLLSNNHVNDMIMFDFRLEDEEVLSHFASFLKTLSLRLNPKTVQDMGFVERR--------------------------------------------------GGKQXXXXXXXXXXXXEGGA----------------------------------------SFPLYTRALEYICHGDFHVRIAALTV 327
NV ++SLFYLLSNNHVNDMIMFDFRLEDEEVLSHFASFLKTLSLRLN TVQ RR GG+ XXX GA SFPLYTRALEYICHGDFH+RIAALTV
Sbjct: 2 NVKSDTSLFYLLSNNHVNDMIMFDFRLEDEEVLSHFASFLKTLSLRLNQDTVQFFLRGPRRKSRAQPQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRDLENGAFSGXXXARDGAPQKXXXXXXXGXXXXXXXXXXXXXXXXXXXXXXXXXXXGSSFPLYTRALEYICHGDFHIRIAALTV 198
BLAST of mRNA_H-paniculata_contig19899.5083.1 vs. uniprot
Match: A0A6H5K768_9PHAE (FPL domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K768_9PHAE) HSP 1 Score: 100 bits (249), Expect = 2.100e-22 Identity = 84/197 (42.64%), Postives = 88/197 (44.67%), Query Frame = 1
Query: 7 NVGKNSSLFYLLSNNHVNDMIMFDFRLEDEEVLSHFASFLKTLSLRLNPKTVQDMGFVERRGGKQXXXXXXXXXXXXEG------------------------------------------------------------------------------------------GASFPLYTRALEYICHGDFHVRIAALTV 327
NV ++SLFYLLSNNHVNDMIMFDFRLEDEEVLSHFASFLKTLSLRLN TVQ RR + XXXXXXXX G+SFPLYTRALEYICHGDFHVRIAALTV
Sbjct: 368 NVKSDTSLFYLLSNNHVNDMIMFDFRLEDEEVLSHFASFLKTLSLRLNQHTVQFFLRGPRRKSRAQPQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSSFPLYTRALEYICHGDFHVRIAALTV 564
BLAST of mRNA_H-paniculata_contig19899.5083.1 vs. uniprot
Match: C1E2B3_MICCC (FPL domain-containing protein (Fragment) n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E2B3_MICCC) HSP 1 Score: 83.2 bits (204), Expect = 9.640e-18 Identity = 50/111 (45.05%), Postives = 69/111 (62.16%), Query Frame = 1
Query: 4 RNVGKNSSLFYLLSNNHVNDMIMFDFRLEDEEVLSHFASFLKTLSLRLNPKTVQ---DMGFVERRGGKQXXXXXXXXXXXXEGGASFPLYTRALEYICHGDFHVRIAALTV 327
+N+ +SLFYL SNNHVN++I DF +DEEV++++ S LKT+SL+LNP TVQ D G + G K+ ASFPL+TRA+ ++ H + VR AA TV
Sbjct: 70 QNIQLETSLFYLFSNNHVNELIECDFDFDDEEVMAYYISLLKTISLKLNPATVQFFFDYGDGVQGGNKKCSEAPDAKL------ASFPLFTRAVGFVEHPESMVRAAARTV 174
BLAST of mRNA_H-paniculata_contig19899.5083.1 vs. uniprot
Match: A0A7S0PJH9_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0PJH9_MICPS) HSP 1 Score: 82.0 bits (201), Expect = 6.010e-16 Identity = 50/111 (45.05%), Postives = 68/111 (61.26%), Query Frame = 1
Query: 4 RNVGKNSSLFYLLSNNHVNDMIMFDFRLEDEEVLSHFASFLKTLSLRLNPKTVQ---DMGFVERRGGKQXXXXXXXXXXXXEGGASFPLYTRALEYICHGDFHVRIAALTV 327
+N+ +SLFYL SNNHVN++I DF +DEEV++++ S LKT+SL+LNP TVQ D G G K+ ASFPL+TRA+ ++ H + VR AA TV
Sbjct: 31 QNIQLETSLFYLFSNNHVNELIECDFDFDDEEVMAYYISLLKTISLKLNPATVQFFFDYGDGVLGGNKKCSEAPDAKL------ASFPLFTRAVGFVEHPESMVRAAARTV 135
BLAST of mRNA_H-paniculata_contig19899.5083.1 vs. uniprot
Match: UPI000BA7EEC3 (protein CLEC16A-like isoform X1 n=4 Tax=Limulus polyphemus TaxID=6850 RepID=UPI000BA7EEC3) HSP 1 Score: 80.1 bits (196), Expect = 2.980e-15 Identity = 46/109 (42.20%), Postives = 61/109 (55.96%), Query Frame = 1
Query: 1 FRNVGKNSSLFYLLSNNHVNDMIMFDFRLEDEEVLSHFASFLKTLSLRLNPKTVQDMGFVERRGGKQXXXXXXXXXXXXEGGASFPLYTRALEYICHGDFHVRIAALTV 327
F N+ +SL+YLLSNNHVN +I+ F DEEV++++ SFLKTLSL+LNP TV E FPLYT A+++ HG+ VRIA T+
Sbjct: 103 FENIRNETSLYYLLSNNHVNSIIVHKFDFSDEEVMAYYISFLKTLSLKLNPHTVN--------------------FFYNEHTNDFPLYTEAIKFFNHGESMVRIAVRTL 191
BLAST of mRNA_H-paniculata_contig19899.5083.1 vs. uniprot
Match: A0A6P8I7U2_ACTTE (protein CLEC16A-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8I7U2_ACTTE) HSP 1 Score: 79.3 bits (194), Expect = 5.230e-15 Identity = 47/109 (43.12%), Postives = 63/109 (57.80%), Query Frame = 1
Query: 1 FRNVGKNSSLFYLLSNNHVNDMIMFDFRLEDEEVLSHFASFLKTLSLRLNPKTVQDMGFVERRGGKQXXXXXXXXXXXXEGGASFPLYTRALEYICHGDFHVRIAALTV 327
F N+ +SL+YLLSNNHVN +I+ F DEEVL+++ SFLKTLSL+LN +T+ F ER+ FPLYT AL++ H + VRIA T+
Sbjct: 104 FENIRNQTSLYYLLSNNHVNSIIIHKFDFSDEEVLAYYISFLKTLSLKLNTQTIHFF-FNERKN-------------------DFPLYTEALKFFNHSESMVRIAVRTL 192
BLAST of mRNA_H-paniculata_contig19899.5083.1 vs. uniprot
Match: UPI00109BBD19 (protein CLEC16A n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BBD19) HSP 1 Score: 79.3 bits (194), Expect = 5.530e-15 Identity = 47/109 (43.12%), Postives = 63/109 (57.80%), Query Frame = 1
Query: 1 FRNVGKNSSLFYLLSNNHVNDMIMFDFRLEDEEVLSHFASFLKTLSLRLNPKTVQDMGFVERRGGKQXXXXXXXXXXXXEGGASFPLYTRALEYICHGDFHVRIAALTV 327
F N+ +SL+YLLSNNHVN +I+ F DEEVL+++ SFLKTLSL+LN +T+ F ER+ FPLYT AL++ H + VRIA T+
Sbjct: 104 FENIRNQTSLYYLLSNNHVNSIIIHKFDFSDEEVLAYYISFLKTLSLKLNTQTIHFF-FNERKN-------------------DFPLYTEALKFFNHSESMVRIAVRTL 192
BLAST of mRNA_H-paniculata_contig19899.5083.1 vs. uniprot
Match: A0A6G1S4J3_9ACAR (Protein CLEC16A n=1 Tax=Aceria tosichella TaxID=561515 RepID=A0A6G1S4J3_9ACAR) HSP 1 Score: 79.0 bits (193), Expect = 7.200e-15 Identity = 45/105 (42.86%), Postives = 58/105 (55.24%), Query Frame = 1
Query: 1 FRNVGKNSSLFYLLSNNHVNDMIMFDFRLEDEEVLSHFASFLKTLSLRLNPKTVQDMGFVERRGGKQXXXXXXXXXXXXEGGASFPLYTRALEYICHGDFHVRIA 315
F N+ +SL+YLLSNNHVN +IM F L DEEV++++ SFLKTLS +LNP T+ G FPLYT A++Y H + VRIA
Sbjct: 131 FENIRHETSLYYLLSNNHVNSIIMHKFDLSDEEVMAYYISFLKTLSFKLNPHTIH----------------------FFFNGTDFPLYTEAIKYFNHPEKMVRIA 213
BLAST of mRNA_H-paniculata_contig19899.5083.1 vs. uniprot
Match: A7RKV2_NEMVE (Predicted protein (Fragment) n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7RKV2_NEMVE) HSP 1 Score: 78.6 bits (192), Expect = 1.010e-14 Identity = 46/109 (42.20%), Postives = 63/109 (57.80%), Query Frame = 1
Query: 1 FRNVGKNSSLFYLLSNNHVNDMIMFDFRLEDEEVLSHFASFLKTLSLRLNPKTVQDMGFVERRGGKQXXXXXXXXXXXXEGGASFPLYTRALEYICHGDFHVRIAALTV 327
F N+ +SL+YLLSNNHVN +I+ F DEEVL+++ SFLKTLSL+LN +T+ F ER+ FPLYT A+++ H + VRIA T+
Sbjct: 79 FENIRNETSLYYLLSNNHVNSIIIHKFDFSDEEVLAYYISFLKTLSLKLNTQTIHFF-FNERKN-------------------DFPLYTEAIKFFNHSESMVRIAVRTL 167
BLAST of mRNA_H-paniculata_contig19899.5083.1 vs. uniprot
Match: UPI0013906825 (protein CLEC16A n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI0013906825) HSP 1 Score: 78.6 bits (192), Expect = 1.040e-14 Identity = 46/109 (42.20%), Postives = 63/109 (57.80%), Query Frame = 1
Query: 1 FRNVGKNSSLFYLLSNNHVNDMIMFDFRLEDEEVLSHFASFLKTLSLRLNPKTVQDMGFVERRGGKQXXXXXXXXXXXXEGGASFPLYTRALEYICHGDFHVRIAALTV 327
F N+ +SL+YLLSNNHVN +I+ F DEEVL+++ SFLKTLSL+LN +T+ F ER+ FPLYT A+++ H + VRIA T+
Sbjct: 104 FENIRNETSLYYLLSNNHVNSIIIHKFDFSDEEVLAYYISFLKTLSLKLNTQTIHFF-FNERKN-------------------DFPLYTEAIKFFNHSESMVRIAVRTL 192 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19899.5083.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig19899.5083.1 >prot_H-paniculata_contig19899.5083.1 ID=prot_H-paniculata_contig19899.5083.1|Name=mRNA_H-paniculata_contig19899.5083.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=109bp FRNVGKNSSLFYLLSNNHVNDMIMFDFRLEDEEVLSHFASFLKTLSLRLNback to top mRNA from alignment at H-paniculata_contig19899:2804..3787+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig19899.5083.1 ID=mRNA_H-paniculata_contig19899.5083.1|Name=mRNA_H-paniculata_contig19899.5083.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=984bp|location=Sequence derived from alignment at H-paniculata_contig19899:2804..3787+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig19899:2804..3787+ >mRNA_H-paniculata_contig19899.5083.1 ID=mRNA_H-paniculata_contig19899.5083.1|Name=mRNA_H-paniculata_contig19899.5083.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=654bp|location=Sequence derived from alignment at H-paniculata_contig19899:2804..3787+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |