prot_H-paniculata_contig1977.5030.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1977.5030.1
Unique Nameprot_H-paniculata_contig1977.5030.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length173
Homology
BLAST of mRNA_H-paniculata_contig1977.5030.1 vs. uniprot
Match: A0A1J3IYK5_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3IYK5_NOCCA)

HSP 1 Score: 85.1 bits (209), Expect = 2.940e-16
Identity = 55/155 (35.48%), Postives = 79/155 (50.97%), Query Frame = 0
Query:    1 MKDLGSLSRVLGIDVRRDRPNGTISISQGDYIREVLKRHVFDECRGVPTPVEERVEILASESADKPREPNPIGAVLGNSTEYRGMVGTLMCASTGTRPDIAYAVHQEARRMEDPCREDFSTCNRIFVIAVLRLTSALRSAVRVMVTIWKDSLMPI 155
            MKD+G  SR+LG+D+ RDR  GT+ +SQ  YI +VLK     E +   TP+     + +    ++  E     AV    T Y   VG+LM A  G+RPDIAYAV   +R M +P R+ ++        AV  +   LR + +  +T  KD    I
Sbjct:  115 MKDMGKASRILGMDIIRDRERGTLQLSQESYIEKVLKTFGMTEAKPTTTPLATHFRLKSLTKDERKEE-----AVHMEDTPYASAVGSLMYAMIGSRPDIAYAVGVISRFMSNPGRDHWT--------AVKWVLRYLRGSSKASLTFTKDKSFSI 256          
BLAST of mRNA_H-paniculata_contig1977.5030.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS)

HSP 1 Score: 84.7 bits (208), Expect = 6.560e-16
Identity = 46/125 (36.80%), Postives = 73/125 (58.40%), Query Frame = 0
Query:    1 MKDLGSLSRVLGIDVRRDRPNGTISISQGDYIREVLKRHVFDECRGVPTPVEERVEILASESADKPREPNPIGAVLGNSTEYRGMVGTLMCASTGTRPDIAYAVHQEARRMEDPCREDFSTCNRI 125
            +KDLG   +++GI+++RDR NGTIS+SQ  YI  VL R      R V TP++  V IL   + D   +P  +G        Y+ ++G+L+ A+ GTRPDI++AV +  +   +P  E ++   R+
Sbjct: 1100 VKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTRFGMQNARPVSTPLDPNV-ILKKRTDDLVADPAMVGG-------YQSVIGSLLYAARGTRPDISHAVQELGQFASNPGPEHWTALKRV 1216          
BLAST of mRNA_H-paniculata_contig1977.5030.1 vs. uniprot
Match: A0A6D2JMB2_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JMB2_9BRAS)

HSP 1 Score: 83.2 bits (204), Expect = 2.260e-15
Identity = 46/120 (38.33%), Postives = 68/120 (56.67%), Query Frame = 0
Query:    1 MKDLGSLSRVLGIDVRRDRPNGTISISQGDYIREVLKRHVFDECRGVPTPVEERVEILASESADKPREPNPIGAVLGNSTEYRGMVGTLMCASTGTRPDIAYAVHQEARRMEDPCREDFS 120
            MKDLG  SR+LG+D+ RDR  GT+ +SQ  YI +VLK     + +   TP+    ++ +   A++  E      V   +  Y   VG+LM A  G+RPD+AYAV   +R M +P RE ++
Sbjct: 1160 MKDLGKASRILGMDIIRDREKGTLKLSQESYIEKVLKAFDMADAKSTTTPLATHFKLKSLTKAERKEE-----VVHMENKPYASAVGSLMYAMIGSRPDLAYAVGVISRFMSNPGREHWT 1274          
BLAST of mRNA_H-paniculata_contig1977.5030.1 vs. uniprot
Match: A0A6D2IS22_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2IS22_9BRAS)

HSP 1 Score: 82.8 bits (203), Expect = 2.850e-15
Identity = 54/158 (34.18%), Postives = 83/158 (52.53%), Query Frame = 0
Query:    1 MKDLGSLSRVLGIDVRRDRPNGTISISQGDYIREVLKRHVFDECRGVPTPVEERVEILA---SESADKPREPNPIGAVLGNSTEYRGMVGTLMCASTGTRPDIAYAVHQEARRMEDPCREDFSTCNRIFVIAVLRLTSALRSAVRVMVTIWKDSLMPI 155
            MKDLG   R+LG+D+ RD   G + +SQ  Y++++LK     +CR V TP+   +++ A    +  ++ RE + I         Y  +VG+LM A  G+RPD+AYAV   +R M  P RE +S        AV  +   L+ A    +T  KDS + +
Sbjct:  471 MKDLGPARRILGMDIIRDNKRGVLVLSQEAYLQKLLKTFSMWDCREVQTPLGSHIKLQALTPQQEVEQAREMDKI--------PYASVVGSLMYAMVGSRPDLAYAVGMVSRYMGKPGREHWS--------AVQWILRYLKGAASKCLTFTKDSELKV 612          
BLAST of mRNA_H-paniculata_contig1977.5030.1 vs. uniprot
Match: UPI00142E19AD (uncharacterized protein LOC103874474 n=1 Tax=Brassica campestris TaxID=3711 RepID=UPI00142E19AD)

HSP 1 Score: 82.8 bits (203), Expect = 3.060e-15
Identity = 43/114 (37.72%), Postives = 66/114 (57.89%), Query Frame = 0
Query:    1 MKDLGSLSRVLGIDVRRDRPNGTISISQGDYIREVLKRHVFDECRGVPTPVEERVEILASESADKPREPNPIGAVLGNSTEYRGMVGTLMCASTGTRPDIAYAVHQEARRMEDP 114
            MKD+G  SR+LGID++RDR   T+ + Q  YI++VLKR    E + V TP+    ++ + ++AD+  +   +         Y   VG++M A  GTRPD+AYA+   +R M  P
Sbjct: 1061 MKDMGPASRILGIDIKRDREQDTLKLCQSGYIQKVLKRFKMSESKAVATPMGSHFKLASVKNADERIDTEKV--------PYLSAVGSVMYAMVGTRPDVAYALGLVSRFMSKP 1166          
BLAST of mRNA_H-paniculata_contig1977.5030.1 vs. uniprot
Match: A0A1J3DQ82_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3DQ82_NOCCA)

HSP 1 Score: 80.9 bits (198), Expect = 4.970e-15
Identity = 57/155 (36.77%), Postives = 80/155 (51.61%), Query Frame = 0
Query:    1 MKDLGSLSRVLGIDVRRDRPNGTISISQGDYIREVLKRHVFDECRGVPTPVEERVEILASESADKPREPNPIGAVLGNSTEYRGMVGTLMCASTGTRPDIAYAVHQEARRMEDPCREDFSTCNRIFVIAVLRLTSALRSAVRVMVTIWKDSLMPI 155
            MKD+G  SR+LG+D+ RDR  GT+ +SQ  YI +VLK     E +   TP+      L S S D+ +E     A    +T     VG+LM A  G+RPDIAYAV   +R M +P R+ ++        AV  +   LR + +  +T  KD    I
Sbjct:   25 MKDMGKASRILGMDIIRDREKGTLQLSQESYIEKVLKTFGMTEAKPTSTPLATHFR-LKSLSKDERKEE----AAHMENTPNASAVGSLMYAMIGSRPDIAYAVGVISRFMSNPGRDHWT--------AVKWVLRYLRGSSKASLTFTKDKSFSI 166          
BLAST of mRNA_H-paniculata_contig1977.5030.1 vs. uniprot
Match: A0A1J3I7B7_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3I7B7_NOCCA)

HSP 1 Score: 81.3 bits (199), Expect = 6.360e-15
Identity = 45/120 (37.50%), Postives = 68/120 (56.67%), Query Frame = 0
Query:    1 MKDLGSLSRVLGIDVRRDRPNGTISISQGDYIREVLKRHVFDECRGVPTPVEERVEILASESADKPREPNPIGAVLGNSTEYRGMVGTLMCASTGTRPDIAYAVHQEARRMEDPCREDFS 120
            MKDLG  SR+LG+D+ RDR  GT+ +SQ +YI +VLK     E +   TP+     + +    ++  E     A+    T Y   VG+LM A  G+RPD+A+AV   +R M +P R+ ++
Sbjct:   96 MKDLGKASRILGMDIIRDREKGTLKLSQENYIEKVLKAFGMTEAKPTITPLATHFRLKSLTKDERKEE-----AIHMEGTPYASAVGSLMYAMIGSRPDLAFAVGVISRFMSNPGRDHWT 210          
BLAST of mRNA_H-paniculata_contig1977.5030.1 vs. uniprot
Match: A0A2U1MW82_ARTAN (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1MW82_ARTAN)

HSP 1 Score: 81.6 bits (200), Expect = 7.660e-15
Identity = 43/116 (37.07%), Postives = 66/116 (56.90%), Query Frame = 0
Query:    1 MKDLGSLSRVLGIDVRRDRPNGTISISQGDYIREVLKRHVFDECRGVPTPVEERVEILASESADKPREPNPIGAVLGNSTEYRGMVGTLMCASTGTRPDIAYAVHQEARRMEDPCR 116
            MKDLG+  ++LG+++RRDR  G +++SQ DYI +VLKR     C+ + TP+    ++ + E      +   +  V      Y   VG+LM A   TRPD+A+AV   +R M +P R
Sbjct:  990 MKDLGAAKKILGMEIRRDRKMGKLTLSQSDYISKVLKRFNMSNCKPILTPLAPHFKLSSHECPKSEEDKEDMSLV-----PYSSAVGSLMYAMVCTRPDLAHAVSVVSRYMHNPGR 1100          
BLAST of mRNA_H-paniculata_contig1977.5030.1 vs. uniprot
Match: A0A293MM55_ORNER (Reverse transcriptase, gag, polyprotein (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293MM55_ORNER)

HSP 1 Score: 81.6 bits (200), Expect = 7.670e-15
Identity = 46/105 (43.81%), Postives = 63/105 (60.00%), Query Frame = 0
Query:    1 MKDLGSLSRVLGIDVRRDRPNGTISISQGDYIREVLKRHVFDECRGVPTPVEERVEILASESADKPREPNPIGAVLGNSTEYRGMVGTLMCASTGTRPDIAYAVH 105
            +KDLG    +LG++V+RD+  GTISISQ  YI EVLKR+  + C+ V TP+E     L  E +   RE    G        Y+ ++G+LM    GTRPDIA+AV+
Sbjct: 1053 LKDLGEPKYILGLEVKRDKTQGTISISQKKYIGEVLKRYGMENCKPVSTPIEPG---LTQEESTSQREEQLQGI------PYQSLIGSLMYLVQGTRPDIAFAVN 1148          
BLAST of mRNA_H-paniculata_contig1977.5030.1 vs. uniprot
Match: A0A6A3BLN2_HIBSY (Cytochrome P450 71A9-like n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3BLN2_HIBSY)

HSP 1 Score: 81.3 bits (199), Expect = 1.040e-14
Identity = 45/125 (36.00%), Postives = 72/125 (57.60%), Query Frame = 0
Query:    1 MKDLGSLSRVLGIDVRRDRPNGTISISQGDYIREVLKRHVFDECRGVPTPVEERVEILASESADKPREPNPIGAVLGNSTEYRGMVGTLMCASTGTRPDIAYAVHQEARRMEDPCREDFSTCNRI 125
            MKDLGS++++LG+ + RDR N  I +SQ +Y++++L R    +C+ + TP+    ++ +S S     E   +  V      Y   VG+LM +   TRPDIA AV   +R M +P +E ++T  RI
Sbjct:  780 MKDLGSVNKILGMQIHRDRSNRKIWLSQKNYLKKILSRFNMKDCKPISTPLPINFKLSSSMSPSSEEEMMEMSRV-----PYASAVGSLMFSMICTRPDIAQAVGVVSRYMANPGKEHWNTMKRI 899          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1977.5030.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1J3IYK5_NOCCA2.940e-1635.48Retrovirus-related Pol polyprotein from transposon... [more]
A0A284QR88_ARMOS6.560e-1636.80Uncharacterized protein n=2 Tax=Armillaria TaxID=4... [more]
A0A6D2JMB2_9BRAS2.260e-1538.33Uncharacterized protein n=1 Tax=Microthlaspi errat... [more]
A0A6D2IS22_9BRAS2.850e-1534.18Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI00142E19AD3.060e-1537.72uncharacterized protein LOC103874474 n=1 Tax=Brass... [more]
A0A1J3DQ82_NOCCA4.970e-1536.77Retrovirus-related Pol polyprotein from transposon... [more]
A0A1J3I7B7_NOCCA6.360e-1537.50Retrovirus-related Pol polyprotein from transposon... [more]
A0A2U1MW82_ARTAN7.660e-1537.07Retrovirus-related Pol polyprotein from transposon... [more]
A0A293MM55_ORNER7.670e-1543.81Reverse transcriptase, gag, polyprotein (Fragment)... [more]
A0A6A3BLN2_HIBSY1.040e-1436.00Cytochrome P450 71A9-like n=1 Tax=Hibiscus syriacu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1977contigH-paniculata_contig1977:6237..6800 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1977.5030.1mRNA_H-paniculata_contig1977.5030.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1977 4564..7136 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1977.5030.1 ID=prot_H-paniculata_contig1977.5030.1|Name=mRNA_H-paniculata_contig1977.5030.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=173bp
MKDLGSLSRVLGIDVRRDRPNGTISISQGDYIREVLKRHVFDECRGVPTP
VEERVEILASESADKPREPNPIGAVLGNSTEYRGMVGTLMCASTGTRPDI
AYAVHQEARRMEDPCREDFSTCNRIFVIAVLRLTSALRSAVRVMVTIWKD
SLMPIGRKMSRTESPQRDTLPS*
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