mRNA_H-paniculata_contig1977.5030.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1977.5030.1
Unique NamemRNA_H-paniculata_contig1977.5030.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig1977.5030.1 vs. uniprot
Match: A0A498M2F0_LABRO (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Labeo rohita TaxID=84645 RepID=A0A498M2F0_LABRO)

HSP 1 Score: 343 bits (881), Expect = 2.060e-103
Identity = 251/778 (32.26%), Postives = 388/778 (49.87%), Query Frame = 1
Query:   16 KANGLQMKRLRSKQGREFTGEEFRQFCAENSIKQEFSVAYTPQQNGVAERSWRTVFETTRSEMIIANMGCRYWVEAARAAVYCLNRASTRPHNGGLPHEKWHVTTPKLDHLRVFGCTAYVMFQSQQRRKLDDKTWLRVFLGHYEDSPSYRIYRPENKSVQLSRNVRFDEENFVTAHHGQLEHDGT--RDIEGLFSAPSVTPAVTRSRARGEETSRILKRARARENREENSGSAARVAKVEDTSNPTRAVSEEEPKCAAAALKNQEADKWRAAM-----TFVKTWTWESEDRGRLPVGWKAISTKWIIKRKLKEEGSVPRYKARLVAQSFSQVGGEDFFETSALVAHMSTLHTVFSLATKHDFELEGMGVDVAYLNAPMEEELFVKLPSEFFPFSRDIPFVRRLRKRPYDLKQSSRNWNNTLDDFLVGIGLQRSTTDPCL*FSRDEGGETDILVAIYVDYLVIARRHEK-VDKFKDNISWRFTMKDLGSLSRVLGIDVRRDRPNGTISISQGDYIREVLKRHVFDECRGVPTPVEERVEILASESADKPREPNPIGAVLGNSTEYRGMVGTLMCASTGTRPDIAYAVHQEARRMEDPCREDFSTCNRIFVIAVLRLTSALRSAVRVMVTIWKDSLMP-IGRKMSRTESPQRDTLP-S*TVVR*VGVLGS--------NS*SCTEAEYIAAGEVGKEAVYLRDLQGSIGFGCRGSTTLLED-KSAINLSKGSDTHCRTKHIGVRWHGIREWVREGILALKYVQTGDHLADILTTGLSRVK 2292
            K+ G Q+K LR+  G E+T  EF+ F  +  I+ E +V  TP+QNGVAER  +T+ ET RS +  A +  ++W EA   AVY  NR+ T+   G  P E W    PK+DHLR+FGCT Y      +R+KLD K    + LG+  ++  YR+Y  +   V  SR+V F+E N           DG   R +E     P    +  +   R E   R+ K         +  G    VA     SNPT      EPK     L + +  KW+ AM     +      W   +   LP G KA+ +KW+ K K+  +G+  R+KARLVAQ FSQ  G D+ ET + V    ++ T+ + A ++  +L  M V  A+LN  ++EE++++ P  F    ++   V +L +  Y LKQS R WN  LD+ L  +G  ++T DPC+  +    GE   ++A+YVD +++A   +K + + K  ++  F +KD+G L+  LG+ + +    G I + Q  Y   VLK+   +  + V TPV+   +++      +  +P           +++  VG+L+  ST TRPDIAYAV+  AR    P ++ ++        AV R+   L+  + + +   KD     IG   +     Q D    S  + +  G   S         + S  EAEY+A     +EAV++R L   +     G T + ED +SAI ++K S  H R KHI +++H IRE +  G++ L+Y  T D +AD+ T GLS+ K
Sbjct:    4 KSTGRQLKVLRTDNGGEYTSSEFQDFLKKEGIRHELTVPKTPEQNGVAERMNKTLMETVRSMLADAKLPQKFWAEALSTAVYLRNRSPTKSVKGMTPFEAWTGEKPKVDHLRIFGCTVYAHVPKDERKKLDPKAKKCILLGYGTETKGYRLYDSKLAKVFFSRDVIFNESNHAFEKEPVANEDGAVNRYVEFDCQEPDNEESPEQKVQRSE---RLRKPP-------DYYGEWVTVA-----SNPTT-----EPKTVKDVLSSPDKAKWKEAMEKEMESLYANNVWNLVE---LPKGRKAVGSKWVFKVKVDADGTFERHKARLVAQGFSQKFGSDYDETFSPVVRFESVRTIIAQAVQYGLKLHQMDVKTAFLNGELKEEVYMQQPEGFVVKGKEH-LVCKLNRSIYGLKQSPRCWNIVLDEQLKKMGFVQTTGDPCIYTAAT--GEM-FIIAVYVDDILLAGCSDKRMMEVKKMLAKHFEIKDMGELTHFLGVKIIQKPETGEIWMGQATYAENVLKKFGMENSKPVSTPVDINTKLVKHSDDSEVMDPK----------QFQSAVGSLLYLSTRTRPDIAYAVNNVARFCAKPTKQHWT--------AVKRIMRYLKGTLNLGLLYNKDKPKECIGFSDADWAGDQNDRKSMSGYMFQISGAAVSWRSKKQTCVALSTAEAEYMALASAAQEAVWMRQLMTDLKVNQAGPTVMFEDNQSAICMAKNSQFHGRAKHIDIKYHFIREKIAGGVIDLQYCNTDDMVADMFTKGLSQEK 736          
BLAST of mRNA_H-paniculata_contig1977.5030.1 vs. uniprot
Match: A0A151R6U8_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=5 Tax=Cajanus cajan TaxID=3821 RepID=A0A151R6U8_CAJCA)

HSP 1 Score: 350 bits (898), Expect = 7.810e-102
Identity = 243/771 (31.52%), Postives = 389/771 (50.45%), Query Frame = 1
Query:   25 GLQMKRLRSKQGREFTGEEFRQFCAENSIKQEFSVAYTPQQNGVAERSWRTVFETTRSEMIIANMGCRYWVEAARAAVYCLNRASTRPHNGGLPHEKWHVTTPKLDHLRVFGCTAYVMFQSQQRRKLDDKTWLRVFLGHYEDSPSYRIYRPENKSVQLSRNVRFDEENFVTAHHGQLEHDGTRDIEGLFSAPSVTPAVTRSRARGEETSRILKRARARENREENSGSAARVAKVEDTSNPT--------------RAVSEEEPKCAAAALKNQEADKWRAAM-----TFVKTWTWESEDRGRLPVGWKAISTKWIIKRKLKEEGSVPRYKARLVAQSFSQVGGEDFFETSALVAHMSTLHTVFSLATKHDFELEGMGVDVAYLNAPMEEELFVKLPSEFFPFSRDIPFVRRLRKRPYDLKQSSRNWNNTLDDFLVGIGLQRSTTDPCL*FSRDEGGETDILVAIYVDYLVIARRHEKVDKFKDNISWRFTMKDLGSLSRVLGIDVRRDRPNGTISISQGDYIREVLKRHVFDECRGVPTPVEERVEILASESADKPREPNPIGAVLGNSTEYRGMVGTLMCASTGTRPDIAYAVHQEARRMEDPCREDFSTCNRIFVIAVLRLTSALR---SAVRVMVTIWKDSLMPIGRKMSRTESPQRDTLPS*TVVR*VGVLGSNS*SCTEAEYIAAGEVGKEAVYLRDLQGSIGFGCRGSTTLLEDKSAINLSKGSDTHCRTKHIGVRWHGIREWVREGILALKYVQTGDHLADILT 2271
            G ++K LR+  G E+   +F  FC +  IK++F+VA+TPQQNGVAER  RT+ E TR+ +  A +   +W EA + A Y +NR+ +       P E W+        L VFGC  YVM+ SQ+R KLD K+   +FLG+ ++   YR++ P  + V +SR+V F E    T    + E+D T          S+     +S+   ++TS   +    +E  E+N G   R  +   T  P+                  E EP     AL++ +  +W AAM        +  TWE  D   LP G KAI  KW+ K K      V RY+ARLV + ++Q  G DF E  + V  ++T+  V ++    +  LE + V  A+L+  ++EE+++  P  F    ++   V RL K  Y LKQ+ R W    D F++ +G  R ++D C  ++R +  +  IL+    D LV+    +++ + K  ++  F MKDLG  +++LG+ + RDR N  I +SQ +Y+ +VL+R    +C+ + TP+    ++ +S S     E   +  V      Y   VG+LM A   TRPDIA AV   +R M DP RE +S   RI  +  ++ TS +          V  + DS         ++ +    TL    V     +    + S TEAEY+AA +  KEA++++ L   +G      T   + +SA+++++    H RTKHIG+++H +RE V EG + ++ + T D++AD++T
Sbjct:  491 GKRIKCLRTDNGGEYIDGDFLAFCKQEGIKRQFTVAHTPQQNGVAERMNRTLLERTRAMLRTAGLAKSFWAEAVKTACYLINRSPSTAIGLKTPMEMWNGKPSNYSSLHVFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVFAE----TELQKEQENDST------IKDTSIVEIGGKSKE--DDTSEAEQEHDEQEPNEDNDGDVRRTTR--QTKKPSWHSDYVMASHDAYCLLTEEGEPSTFQEALRSSDVSQWMAAMHEEIEALHRNKTWELVD---LPKGRKAIGCKWVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRVVLAMCAAFNLHLEQLDVKTAFLHGELQEEIYMLQPEGFKEQGKEN-LVCRLTKSLYGLKQAPRCWYKRFDSFIISLGYNRLSSDHCTYYNRFDDNDFIILLLYVDDMLVVGPNKDQIQELKAQLAREFDMKDLGPANKILGMQIHRDRKNRRIWLSQKNYLLKVLRRFNMQDCKPISTPLPVNYKLSSSMSPSNEAERMEMSRV-----PYASAVGSLMYAMICTRPDIAQAVGAVSRFMADPGREHWSIVKRI--LRYIKGTSDVALCFEGSEFFVRGYVDSDFAGDLDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWIQRLLEELGHKQEKITVYCDSQSALHIARNPAFHSRTKHIGIQYHFVREVVEEGKVDMQKIHTKDNIADVMT 1236          
BLAST of mRNA_H-paniculata_contig1977.5030.1 vs. uniprot
Match: A0A2N9IUS6_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9IUS6_FAGSY)

HSP 1 Score: 346 bits (887), Expect = 1.310e-98
Identity = 248/787 (31.51%), Postives = 377/787 (47.90%), Query Frame = 1
Query:   34 MKRLRSKQGREFTGEEFRQFCAENSIKQEFSVAYTPQQNGVAERSWRTVFETTRSEMIIANMGCRYWVEAARAAVYCLNRASTRPHNGGLPHEKWHVTTPKLDHLRVFGCTAYVMFQSQQRRKLDDKTWLRVFLGHYEDSPSYRIYRPENKSVQLSRNVRFDEENFVTAHH--------------------------GQLEHDGTRDIEGLFSAPSVTPAVTRSRARGEETSRILKRARARENREENSGSAARVAKVEDTSNPTRAVSEEEPKCAAAALKNQEADKWRAAM-----TFVKTWTWESEDRGRLPVGWKAISTKWIIKRKLKEEGSVPRYKARLVAQSFSQVGGEDFFETSALVAHMSTLHTVFSLATKHDFELEGMGVDVAYLNAPMEEELFVKLPSEFFPFSRDIPFVRRLRKRPYDLKQSSRNWNNTLDDFLVGIGLQRSTTDPCL*FSRDEGGETDILVAIYVDYLVIARRHEKVDKFKDNISWRFTMKDLGSLSRVLGIDVRRDRPNGTISISQGDYIREVLKRHVFDECRGVPTPVEERVEILASESADKPREPNPIGAVLGNSTEYRGMVGTLMCASTGTRPDIAYAVHQEARRMEDPCREDFSTCNRIFVIAVLRLTSALR---SAVRVMVTIWKDSLMPIGRKMSRTESPQRDTLPS*TVVR*VGVLGSNS*SCTEAEYIAAGEVGKEAVYLRDLQGSIGFGCRGSTTLLEDKSAINLSKGSDTHCRTKHIGVRWHGIREWVREGILALKYVQTGDHLADILTTGLSRVK 2292
            +K LR+  G E+TG EF  FC +  IK++F+VAYTPQQNGVAER  RT+ E TR+ +  A M   +W EA + A Y +NR+ +   +   P E W        HL  FG   YVM+ +Q+  KLD K+   VFLG+ +    YR++ P  + V +SR+V F E+      +                           +         +  F+ P V  +    R     +  I++            G+ A     ED           EP     A K+QEA  W  AM        K  TW   D   LP G KAI  KW+ K K      V RY+ARLV + F+Q  G DF E  + V  ++T+  V ++    D  LE + V  A+L+  +EEE+++  P  F    ++   V +L K  Y LKQ+ R W    D F++ +G  R ++DPC+ + R   G   IL+    D LV     +++   K  ++  F MKDLG  +++LG+ + RDR N  I +SQ +Y++++L+R    +C+ +PTP+    ++ +S S     E   +  V      Y   VG+LM A   TRPDIA AV   +R M +P +E +S   RI  +  ++ TS +          V  + DS        S++ S    TL    V     +    + S TEAEY+AA +  KEA++L+ L   +G          + +SA++L+K    H +TKHI V++H +RE V EG + ++ + T D+LAD+LT  ++  K
Sbjct: 1629 IKCLRTDNGGEYTGVEFDSFCQQEGIKRQFTVAYTPQQNGVAERMNRTLLERTRAMLRTAGMAKTFWAEAVKTACYVINRSPSTAIDLKTPMEMWTGKPADYSHLHTFGSPVYVMYNAQEASKLDPKSRKCVFLGYADGVKGYRLWDPTARKVLISRDVIFVEDKVQEKENDXXXXXXXXXXXXXXXXXXXXXXPDSSEXXXXXXXXXQAEFATPQVRRSTRERREPAWHSEYIME------------GNVAYCLLTEDG----------EPSTFHEATKSQEAPMWMVAMQEEIEALHKNKTW---DLVPLPQGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGFAQKEGIDFNEIFSPVVRLTTVRVVLAMCATFDLYLEQLDVKTAFLHGELEEEIYMLQPEGFEEKGKEN-LVCKLNKSLYGLKQAPRCWYKRFDSFIMSLGYNRHSSDPCVYYKRFGDGNFIILLLYVDDMLVAGPNKDRITDLKAQLAREFEMKDLGPANKILGMQIYRDRNNRKIWLSQKNYLKKILRRFNMQDCKPIPTPLPINFKLSSSMSPSNEAERMEMSRV-----PYASAVGSLMFAMVCTRPDIAQAVGVVSRYMVNPGKEHWSAVKRI--LRYVKGTSNVALCYGGSDFTVRGYVDSDYAGDLDKSKSTSGYVFTLAGGAVSWVSKLQSIVATSTTEAEYVAATQASKEAIWLQMLLEELGHKQEKIALFCDSQSALHLAKNPAFHSKTKHIRVQYHFVREKVEEGSVDIQKIHTKDNLADMLTKPINNDK 2382          
BLAST of mRNA_H-paniculata_contig1977.5030.1 vs. uniprot
Match: B8YLY6_MEDTR (Gag-Pol polyprotein n=4 Tax=Medicago truncatula TaxID=3880 RepID=B8YLY6_MEDTR)

HSP 1 Score: 337 bits (865), Expect = 5.480e-97
Identity = 236/761 (31.01%), Postives = 374/761 (49.15%), Query Frame = 1
Query:   34 MKRLRSKQGREFTGEEFRQFCAENSIKQEFSVAYTPQQNGVAERSWRTVFETTRSEMIIANMGCRYWVEAARAAVYCLNRASTRPHNGGLPHEKWHVTTPKLDHLRVFGCTAYVMFQSQQRRKLDDKTWLRVFLGHYEDSPSYRIYRPENKSVQLSRNVRFDEENFVTAHHGQLEHDGTRDIEGLFSAPSVTPAVTRSRARGEETSRILKRARARENREENSGSAARVAKVEDTSNPTRAVSEEEPKCAAAALKNQEADKWRAAM-----TFVKTWTWESEDRGRLPVGWKAISTKWIIKRKLKEEGSVPRYKARLVAQSFSQVGGEDFFETSALVAHMSTLHTVFSLATKHDFELEGMGVDVAYLNAPMEEELFVKLPSEFFPFSRDIPFVRRLRKRPYDLKQSSRNWNNTLDDFLVGIGLQRSTTDPCL*FSRDEGGETDILVAIYVDYLVIARRHEKVDKFKDNISWRFTMKDLGSLSRVLGIDVRRDRPNGTISISQGDYIREVLKRHVFDECRGVPTPVEERVEILASESADKPREPNPIGAVLGNSTEYRGMVGTLMCASTGTRPDIAYAVHQEARRMEDPCREDFSTCNRIFVIAVLRLTSALRSAVRVM-VTIWK--DSLMPIGRKMSRTESPQRDTLPS*TVVR*VGVLGSNS*SCTEAEYIAAGEVGKEAVYLRDLQGSIGFGCRGSTTLLEDKSAINLSKGSDTHCRTKHIGVRWHGIREWVREGILALKYVQTGDHLADILTTGLSRVK 2292
            +K LR+  G E+   EF  FC +  I ++F+VA+TPQQNGVAER  RT+ E TR+ +  A M   +W EAA+ A Y +NR+ +   +   P E W         L VFGC  YVM+ SQ++ KLD K+   +FLG+ ++   YR++ P  + V +SR+V F E    +          T  ++    +                   +    R R  R+    S      +           E EP     AL   +A +W  AM        +  TWE  +   LP G KAI  KW+ K K      V RY+ARLV + ++Q  G DF E  + V  ++T+  V ++    D  LE + V  A+L+  +EEE+++  P  F    ++   V RL K  Y LKQ+ R W    D F++ +   R ++D C  + R +G +  IL+    D LV+    ++V + K  ++  F MKDLG  +++LG+ + RDR +  I +SQ +Y+R+VL+R    +C+ + TP+    ++ +  S     E   +  V      Y   VG+LM A   TRPDIA AV   +R M DP +E ++   RI  +  ++ TS +        +T+W   DS         ++ +    TL    V     +    + S TEAEY+AA +  KEA++++ L   +G      T   + +SA+++++    H RTKHIGV++H +RE V EG + ++ + T D+LAD++T  ++  K
Sbjct:  544 IKCLRTDNGGEYVDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAGMAKSFWAEAAKTACYVINRSPSTAIDLKTPMEMWKGKPVDYSSLHVFGCPVYVMYNSQEKTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVFAENELQSEQKNDSTSKETAIVQMEEKSKXXXXXXXXXXXXXXXXXXVNDGVR-RSTRQTQKPSWQSDYVMTSHDAYCLITEEGEPSTFHEALNGSDASQWMTAMHEEMEALHRNKTWELVE---LPKGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRVVLAMCAALDLHLEQLDVKTAFLHGELEEEIYMLQPEGFKEQGKEN-LVCRLTKSLYGLKQAPRCWYKRFDSFIISLDYNRLSSDHCTYYKRFDGNDFIILLLYVDDMLVVGPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLRKVLRRFNMQDCKPISTPLPVNFKLSSGMSPSNEAERMEMSRV-----PYASAVGSLMYAMICTRPDIAQAVGVVSRFMADPGKEHWNAVKRI--MRYIKGTSGVAVCFGGSELTVWGYVDSDFAGDHDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWMQRLMEELGHKQEQITVYCDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEEGSVDMQKIHTNDNLADVMTKPINTDK 1292          
BLAST of mRNA_H-paniculata_contig1977.5030.1 vs. uniprot
Match: B8YLY7_LOTJA (Gag-Pol polyprotein n=1 Tax=Lotus japonicus TaxID=34305 RepID=B8YLY7_LOTJA)

HSP 1 Score: 332 bits (852), Expect = 3.470e-95
Identity = 245/778 (31.49%), Postives = 383/778 (49.23%), Query Frame = 1
Query:   25 GLQMKRLRSKQGREFTGEEFRQFCAENSIKQEFSVAYTPQQNGVAERSWRTVFETTRSEMIIANMGCRYWVEAARAAVYCLNRASTRPHNGGLPHEKWHVTTPKLDHLRVFGCTAYVMFQSQQRRKLDDKTWLRVFLGHYEDSPSYRIYRPENKSVQLSRNVRFDEENFVTAHHGQLEHDGTRDIEGLFSAPSVTPAVTRSRARGEETSRI-----------LKRARARENREENSGSAARVAKVEDTSNPTRAVSEE-EPKCAAAALKNQEADKWRAAM-----TFVKTWTWESEDRGRLPVGWKAISTKWIIKRKLKEEGSVPRYKARLVAQSFSQVGGEDFFETSALVAHMSTLHTVFSLATKHDFELEGMGVDVAYLNAPMEEELFVKLPSEFFPFSRDIPFVRRLRKRPYDLKQSSRNWNNTLDDFLVGIGLQRSTTDPCL*FSRDEGGETDILVAIYVDYLVIARRHEKVDKFKDNISWRFTMKDLGSLSRVLGIDVRRDRPNGTISISQGDYIREVLKRHVFDECRGVPTPVEERVEILASESADKPREPNPIGAVLGNSTEYRGMVGTLMCASTGTRPDIAYAVHQEARRMEDPCREDFSTCNRIFVIAVLRLTSALR-----SAVRVMVTIWKDSLMPIGRKMSRTESPQRDTLPS*TVVR*VGVLGSNS*SCTEAEYIAAGEVGKEAVYLRDLQGSIGFGCRGSTTLLEDKSAINLSKGSDTHCRTKHIGVRWHGIREWVREGILALKYVQTGDHLADILTTGLSRVK 2292
            G ++K LR+  G E+T  +F  FC +  I ++F+VA+TPQQNGVAER  RT+ E TR+ +  A +   +W EAA+ A Y +NR+ +       P E W         LRVFGC  YVM+ SQ+R KLD K+    FLG+ ++   YR++ P  + + +SR+V F E         + ++DGT            T  V      GEE S                A  R    +    +     V  + +    +SE+ EP     A+   +A  W AAM        +  TWE  +   LP G KAI  KW+ K K      V RY+ARLV + ++Q  G DF E  + V  ++T+  V ++    +  LE + V  A+L+  +EEE+++  P  F    R+   V RL K  Y LKQ+ R W    D F++ +G  R ++D C  + R + G+  IL+    D LV+    ++V + K  ++  F MKDLG  +++LG+ + RDR +  I +SQ +Y+++VL+R    +   + TP+    ++ +S       E   +  V      Y   VG+LM A   TRPDIA AV   +R M DP +E ++   RI  +  +R TS        S   +   +  D    + ++ S T      TL    V     +    + S TEAEY+AA +  KEA++ + L   +G   +  T   +  SA+++++    H RTKHIGV++H +RE V EG + ++ + T D+LAD++T  ++  K
Sbjct:  541 GKRIKCLRTDNGGEYTDGDFLAFCKQEGITRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAGLAKSFWAEAAKTACYVINRSPSTAIGLKTPMEMWKGKPGDYSSLRVFGCPVYVMYNSQERTKLDPKSRRCTFLGYADNVKGYRLWDPTARKIFVSRDVIFVENELQK----EQKNDGTT---------KETATVEIEEKSGEENSEAEPXXXXXXXXXXXDAEPRRTTRQIRKPSWHSEYVMASHDAYCLLSEDGEPSTFHEAVNGSDASLWMAAMQEEIEALHRNNTWELVE---LPKGRKAIGNKWVFKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRIVLAMCAAFELHLEQLDVKTAFLHGELEEEIYMLQPEGFEEKEREN-LVCRLTKSLYGLKQAPRCWYKRFDSFIMSLGYNRLSSDHCTYYKRFDDGDFIILLLYVDDMLVVGPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLQKVLRRFNMQDYNPISTPLPVNYKLSSSMIPSSEAERMEMSRV-----PYASAVGSLMYAMICTRPDIAQAVGTVSRFMADPGKEHWNAVKRI--LRYIRGTSGAALCFGGSEFTIRGYVDSDFAGDLDKRKSTTGYVF--TLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWTQRLLEELGHKQQKITVYCDSPSALHIARNPAFHSRTKHIGVQYHFVREVVEEGSVNMQKIHTKDNLADVMTKPINSDK 1292          
BLAST of mRNA_H-paniculata_contig1977.5030.1 vs. uniprot
Match: A0A438JDY0_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JDY0_VITVI)

HSP 1 Score: 322 bits (825), Expect = 4.840e-95
Identity = 244/772 (31.61%), Postives = 385/772 (49.87%), Query Frame = 1
Query:   25 GLQMKRLRSKQGREFTGEEFRQFCAENSIKQEFSVAYTPQQNGVAERSWRTVFETTRSEMIIANMGCRYWVEAARAAVYCLNRASTRPHNGGLPHEKWHVTTPKLDHLRVFGCTAYVMFQSQQRRKLDDKTWLRVFLGHYEDSPSYRIYRPENKSVQLSRNVRFDEENFVTAHHGQLEHDGTRDIEGLFSAPSV---TPAVTRS--RARGEE-----TSRILKRARARENREENSGSAARVAKVEDTSNPTRAVSEEEPKCAAAALKNQEADKWRAAM-----TFVKTWTWESEDRGRLPVGWKAISTKWIIKRKLKEEGSVPRYKARLVAQSFSQVGGEDFFETSALVAHMSTLHTVFSLATKHDFELEGMGVDVAYLNAPMEEELFVKLPSEFFPFSRDIPFVRRLRKRPYDLKQSSRNWNNTLDDFLVGIGLQRSTTDPCL*FSRDEGGETDILVAIYVDYLVIARRH-EKVDKFKDNISWRFTMKDLGSLSRVLGIDVRRDRPNGTISISQGDYIREVLKRHVFDECRGVPTPVEERVEILASESADKPREPNPIGAVLGNSTEYRGMVGTLMCASTGTRPDIAYAVHQEARRMEDPCREDFSTCNRIFVIAVLRLTSAL---RSAVRVMVTIWKDSLMPIGRKMSRTESPQRDTLPS*TVVR*VGVLGSNS*SCTEAEYIAAGEVGKEAVYLRDLQGSIGFGCRGSTTLLEDKSAINLSKGSDTHCRTKHIGVRWHGIREWVREGILALKYVQTGDHLADILTTGLS 2283
            GL++K LRS  G E+    F ++CA   I+ E ++  TPQQNGVAER  RT+ E  RS  + A +   +W +A   A Y +NR  + P    LP E W     K  HL+VFGC +YV   S  R KLD K+ +  F+G+ ++   YR +  +N+ +  SRNV F+E+     + G+L    T D+  +    S       +T S  + RGEE      S++  R    E R  +S +     +     N        EP+C   AL+++ + KW  AM     + +   TWE  +   LPVG KA+  KW+ +   + +GS  RYKARLV + F Q  G D+ E  + V  MST+  V  +    +  LE + V  A+L+  +EE+L++  P  F    ++   V +LRK  Y LKQ+ R W    D+F+  IG +R   D C      +     I++ +YVD ++IA    EK++  K  +S +F MKDLG+  ++LG+ + RD+ NGT+ +SQ +Y+++VL R   +E + V TP+    ++   +S     E + +  V      Y   +G+LM A   TRPDIA+AV   +R M  P ++ +     I       L + L    +++++   +  D    I  + S T      TL    +     +    + S TEAEY+AA E GKE ++L      +G          + +SAI L+K S  H ++KHI +++H IR  V   ++ L+ +    + AD+LT G++
Sbjct:    7 GLKVKCLRSDNGGEYIDGGFNEYCAAQGIRMEKTIPGTPQQNGVAERMNRTLNERARSMRLHAGLPKTFWADAVSTAAYLINRGPSVPMEFRLPEEVWSGKEVKFSHLKVFGCVSYVHIDSDARSKLDAKSKICFFIGYGDEKFGYRFWDEQNRKIIRSRNVIFNEQ---VMYKGRLTV--TSDVTEIDQKKSEFVNLDELTESTVQKRGEEDKENVNSKVDLRTPVVEVRR-SSRNIRPPQRYSPVLNYLLLTDGGEPECYNEALQDENSSKWELAMKDEMDSLLGNQTWELTE---LPVGKKALHNKWVYRINNEHDGS-KRYKARLVVKGFQQKEGIDYTEIFSPVVKMSTIRLVLGMVAVENLHLEQLDVKTAFLHGDLEEDLYMIQPEGFIVQGQEN-LVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEADHCCYVKSFDNSY--IILLLYVDDMLIAGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHMSKV-----PYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLDTCLCFTGASLKLQGYVDADFAGDIDSRKSTTGFVF--TLGGTAISWTSNLQKIVTLSTTEAEYVAATEAGKEMIWLHGFLDELGKKQEMGILHSDSQSAIFLAKNSAFHSKSKHIQIKYHFIRYLVEFKLVILEKICGSKNPADMLTKGVT 758          
BLAST of mRNA_H-paniculata_contig1977.5030.1 vs. uniprot
Match: A0A438E432_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=4 Tax=Vitis vinifera TaxID=29760 RepID=A0A438E432_VITVI)

HSP 1 Score: 330 bits (845), Expect = 8.830e-95
Identity = 241/788 (30.58%), Postives = 381/788 (48.35%), Query Frame = 1
Query:   10 IAKANGLQMKRLRSKQGREFTGEEFRQFCAENSIKQEFSVAYTPQQNGVAERSWRTVFETTRSEMIIANMGCRYWVEAARAAVYCLNRASTRPHNGGLPHEKWHVTTPKLDHLRVFGCTAYVMFQSQQRRKLDDKTWLRVFLGHYEDSPSYRIYRPENKSVQLSRNVRFDEENFV----------TAHHGQLEHDG-----TRDIEGLFSAP-------SVTPAVTRSRARGEETSRILKRARARENREENSGSAARVAKVEDTSNPTRAVSEEEPKCAAAALKNQEADKWRAAMTFVKTWTWESE--DRGRLPVGWKAISTKWIIKRKLKEEGSVPRYKARLVAQSFSQVGGEDFFETSALVAHMSTLHTVFSLATKHDFELEGMGVDVAYLNAPMEEELFVKLPSEFFPFSRDIPFVRRLRKRPYDLKQSSRNWNNTLDDFLVGIGLQRSTTDPCL*FSRDEGGETDILVAIYVDYLVIARRHEKVDKFKDNISWRFTMKDLGSLSRVLGIDVRRDRPNGTISISQGDYIREVLKRHVFDECRGVPTPVEERVEILASESADKPREPNPIGAVLGNSTEYRGMVGTLMCASTGTRPDIAYAVHQEARRMEDPCREDFSTCNRIFVIAVLRLTSALRSAV---RVMVTIWKDSLMPIGRKMSRTESPQRDTLPS*TVVR*VGVLGSNS*SCTEAEYIAAGEVGKEAVYLRDLQGSIGFGCRGSTTLLEDKSAINLSKGSDTHCRTKHIGVRWHGIREWVREGILALKYVQTGDHLADILTTGLSRVK 2292
            + +  G Q+K +RS  G E+ G  F Q+C  + I+ E +V  TPQQNGVAER  RT+ E  R  +  + +   +W EA R AV  +N + + P NG +P + W       DHLRVFGC A+V     +R KLD K    +F+G+  +   YR+Y P +K V  SR+V F E+  +          ++ +  ++ D        DI+     P        V P +   ++  E           RE +     S+     + D           EP+     LK++   +W  AM        E+   D  + P G K +  KW+ +RK     S PR+KARLV + F Q  G DF E  + V  MS++ TV  +A   + E+E + V  A+L+  +EEE++++ P  F     D   V +L+K  Y LKQ+ R W    D F+   G  R+T D C+   +   G   IL+    D L++ +   K+ K K  +S  F MKDLG   ++LGI + R+R +G I +SQ +Y+++VL+R   D+ + V  P+    ++ +S+      E N +  +      Y   +G+LM A   TRPDIA+AV   +R M +P +E ++     +++  L+ TS +         ++  + DS M       ++ S    T     V     +    + S TEAE+IA  E  KE ++L+     +G          + +SAI+LSK S  H R+KHI VR+H IR+ + + +L L+ V T D+ +D+LT  L++ K
Sbjct:  403 VERETGRQLKCVRSDNGGEYIGP-FDQYCTNHGIRHEKTVKKTPQQNGVAERMNRTILERVRCLLSHSKLPRSFWGEAMRTAVDLINLSPSVPLNGDVPEKVWTGKEVSYDHLRVFGCRAFVHIPKDERSKLDPKAKQCIFIGYGHEDFGYRLYDPVDKKVVRSRDVVFLEDQTIEDIDKLESAESSTNDLVDLDPLNPPVVHDIDEEVQTPHDDAAEDDVEPEIEGEQSPQEPLXXXXXXRSTREKQPSKKYSSNEYVMISDQG---------EPETYQEVLKHENKTEWLKAMKEEMKSLNENHTYDLVKPPKGKKILKNKWVFRRKNDGNSSQPRFKARLVVKGFDQRKGVDFDEIFSPVVKMSSIRTVLGIAASMNLEVEQLDVKTAFLHGDLEEEIYMEQPEGFIDKGND-QLVCKLKKSLYGLKQAPRQWYRKFDSFMTEHGYSRTTLDHCVFVKKYPDGNFIILLLYVDDMLIMGQDMSKISKLKSELSKSFAMKDLGPAKQILGIRIVRNRSHGLIWLSQENYVKKVLERFNMDKAKPVNCPLAGHFKLSSSQCPTSDEEKNEMQKI-----PYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSNPGKEHWAAVK--WILRYLQGTSKMSLCFGKGEPILDGFTDSDMAGDVDSRKSTSGYLITFAGGAVTWQSRLQKCVALSTTEAEFIAITEACKELLWLKKFLQELGLKQERYVLHCDSQSAIHLSKNSSFHSRSKHIDVRYHWIRDVLNDKLLQLEKVHTDDNTSDMLTKALTKDK 1172          
BLAST of mRNA_H-paniculata_contig1977.5030.1 vs. uniprot
Match: A0A1J3IBS4_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3IBS4_NOCCA)

HSP 1 Score: 323 bits (828), Expect = 2.490e-94
Identity = 246/779 (31.58%), Postives = 378/779 (48.52%), Query Frame = 1
Query:   10 IAKANGLQMKRLRSKQGREFTGEEFRQFCAENSIKQEFSVAYTPQQNGVAERSWRTVFETTRSEMIIANMGCRYWVEAARAAVYCLNRASTRPHNGGLPHEKWHVTTPKLDHLRVFGCTAYVMFQSQQRRKLDDKTWLRVFLGHYEDSPSYRIYRPENKSVQLSRNVRFDEEN---FVTAHHGQLEHD--GTRDIEGLFSAPSVTPAVTRSRA-RGEETSRILKRARARENREENSGSAARVAKVED---TSNPTRAVSEEEPKCAAAALKNQEADKWRAAM-----TFVKTWTWESEDRGRLPVGWKAISTKWIIKRKLKEEGSVPRYKARLVAQSFSQVGGEDFFETSALVAHMSTLHTVFSLATKHDFELEGMGVDVAYLNAPMEEELFVKLPSEFFPFSRDIPFVRRLRKRPYDLKQSSRNWNNTLDDFLVGIGLQRSTTDPCL*FSRDEGGETDILVAIYVDYLV-IARRHEKVDKFKDNISWRFTMKDLGSLSRVLGIDVRRDRPNGTISISQGDYIREVLKRHVFDECRGVPTPVEERVEILASESADKPREPNPIGAVLGNSTEYRGMVGTLMCASTGTRPDIAYAVHQEARRMEDPCREDFSTCNRI--FVIAVLRLTSALRSAVRVMVTIWKDSLMPIGRKMSRTESPQRDTLPS*TVVR*VGVLGSNS*SCTEAEYIAAGEVGKEAVYLRDLQGSIGFGCRGSTTLL-EDKSAINLSKGSDTHCRTKHIGVRWHGIREWVREGILALKYVQTGDHLADILTTGLSRVK 2292
            + K +  Q+K LR+ +G EFT  EF +FC    I  E + AYTP+QNGVAER  RTV E  RS +   N+  ++W E+ R AVY LN + T+      P+E W    P + HLRVFG  AY +  +  R+KLDDK+   +FLG+   S  YR+Y P +  +  SRNV FDEE         +G+LE       D + +  +P  + A T + +                 N  +   S   + +V+    TS+PT               +  E + WR AM     +  K  TW+  +   LP G  +I  KW+ K K   +GS+ +YKARLV + ++Q  G D+ ET + VA   T+ T+ +L     + +    V  A+LN  + EE++V  P  F    ++  FV +L K  Y LKQ+ R W N +D F V  G +RS ++P L   +   G+  ++V +YVD L+ +      V  FKD++  +F M DLG L   LG++V++      I +SQ  Y  ++L+R     C    TP+    ++   +   K            ++T +R +VG L+   T TRPDI++AV   +R M  P R+ F    R+  ++ A         +     +  + DS      +  ++ S     L S  V          + S +EAEY AA     +AV+LR +   +      +TT+  ++K+ I ++K    H RTKHI ++ H IR+ V EG +AL+Y  T +  AD+LT  LS+ K
Sbjct:  132 VEKQSEQQLKVLRTDRGGEFTSTEFNKFCESEGIHHELTTAYTPEQNGVAERKNRTVVEMARSMLKQKNLPNQFWAESVRTAVYLLNISPTKAVLNRTPYEAWCGRKPGVSHLRVFGSIAYSLIDAHNRKKLDDKSEKCIFLGYSSQSKGYRLYNPVSGKIIESRNVTFDEETVWRLREGDNGELEEIVVDNNDEQVVSESPVGSEANTPTNSVPNSXXXXXXXXXXXXSNAPQKFRSLQEIYEVQHAFFTSDPTMFT------------EAAEKEDWRKAMDEEITSIEKNSTWQLVE---LPEGKHSIGVKWVFKTKYHADGSIQKYKARLVVKGYAQEYGVDYEETFSPVARFDTVRTLLALGAHMHWPIYQFDVKSAFLNGELLEEVYVDQPEGFVVRGKE-GFVYKLHKALYGLKQAPRAWYNKIDLFFVESGFERSRSEPTLYIKKQSEGDI-LIVCLYVDDLIYMGSCASLVADFKDSMMKKFEMSDLGLLHFFLGLEVKQVEDG--IFVSQQKYAMDLLRRFNMTNCNVEETPMNINEKLQKDDGTGK-----------ADATRFRSLVGGLIYL-THTRPDISFAVSAISRFMHCPTRQHFGAAKRLLRYIAATTEFGLWYNTVSEFELVGFTDSDWAGCVQDRKSTSGHVFNLGSGAVCWSSKKQNVTALSSSEAEYTAATSAACQAVWLRRILEDVKQEQLKATTIFCDNKATIAMTKNPAYHGRTKHISIKVHFIRDLVNEGSVALEYCSTNEQRADVLTKALSKSK 879          
BLAST of mRNA_H-paniculata_contig1977.5030.1 vs. uniprot
Match: A0A6D2HJZ4_9BRAS (Integrase catalytic domain-containing protein n=3 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2HJZ4_9BRAS)

HSP 1 Score: 329 bits (844), Expect = 4.860e-94
Identity = 250/819 (30.53%), Postives = 388/819 (47.37%), Query Frame = 1
Query:   10 IAKANGLQMKRLRSKQGREFTGEEFRQFCAENSIKQEFSVAYTPQQNGVAERSWRTVFETTRSEMIIANMGCRYWVEAARAAVYCLNRASTRPHNGGLPHEKWHVTTPKLDHLRVFGCTAYVMFQSQQRRKLDDKTWLRVFLGHYEDSPSYRIYRPENKSVQLSRNVRFDEENFV------------------------TAHHGQLE-------------------------HDGTRDIEGLFSAPSVTPAVTRSRARGEETSRILKRARARENREENSGSAARVAKVEDTSNPTRAVSEEEPKCAAAALKNQEADKWRAAM-----TFVKTWTWESEDRGRLPVGWKAISTKWIIKRKLKEEGSVPRYKARLVAQSFSQVGGEDFFETSALVAHMSTLHTVFSLATKHDFELEGMGVDVAYLNAPMEEELFVKLPSEFFPFSRDIPFVRRLRKRPYDLKQSSRNWNNTLDDFLVGIGLQRSTTDPCL*FSRDEGGETDILVAIYVD-YLVIARRHEKVDKFKDNISWRFTMKDLGSLSRVLGIDVRRDRPNGTISISQGDYIREVLKRHVFDECRGVPTPVEERVEILASESADKPREPNPIGAVLGNSTEYRGMVGTLMCASTGTRPDIAYAVHQEARRMEDPCREDFSTCNRIFVIAVLRLTSALR---SAVRVMVTIWKDSLMPIGRKMSRTESPQRDTLPS*TVVR*VGVLGSNS*SCTEAEYIAAGEVGKEAVYLRDLQGSIGFGCRGSTTLLEDKSAINLSKGSDTHCRTKHIGVRWHGIREWVREGILALKYVQTGDHLADILTTGLSRVK 2292
            + +  G ++K +RS  G E++G  F  +C E+ I+ +F+   TPQ NG+AER  RT+ E  R  +  + +   +W EA    V+ LN + + P NG +P   W       DHLRVFGC A+V     +R KL+ K+   VF+G+ +D   YR Y P  K +  SR+V F E+  +                        T+ HGQ+E                         HDGT   E L       PAV RS    + ++R                         D S         EP+    AL+++  DKW  AM     +F +  T+   D  +LP G KA+  KW+ + K ++   +PRY+ARLV + + Q  G DF E  + V  MS++  V  LA   D E+E M V  A+L+  +EEE+++  P  F    ++   V RL+K  Y LKQ+ R W       +   G + +T+D C+ F +  G +  I++ +YVD  L++ R   ++ + K ++S  F MKDLG   ++LG+ + RDR    I +SQ  YI +VL+R   D+ + V TP+     + + +S     E   +  V      Y   VG+LM A   TRPD+A+AV   +R + +P R+ ++     +++  LR TS+L+      + ++  + DS M       ++ S    T     V     +    + S TEAE+IAA E  KE +++++    IGF       L + +SAI L K S  H R+KHI  R+H IR+ V    + L+ V T D+ AD++T  L R K
Sbjct:  526 VERQTGKKLKCIRSDNGGEYSGP-FDAYCKEHGIRHQFTPPKTPQLNGLAERMNRTIVERVRCLISQSGLSMTFWGEALSTVVHVLNLSPSSPLNGDIPERVWTGKDVSYDHLRVFGCKAFVHIPKDERSKLEMKSRQCVFIGYGQDEFGYRFYDPVEKKLVRSRDVVFMEDQTIKDIDKSGNPTQSFESLIGPEVAPSTSVHGQVEGEVHSDTPNADAPAHDEGIGGHDDDHDGTPTTENL-------PAVRRSERGPKPSTRY------------------------DPSEYVLLTDGGEPESFMEALEDEHKDKWFGAMGEEMDSFEENHTF---DLVKLPKGKKALLNKWVYRIKHEDTSLLPRYRARLVVKGYGQKKGVDFDEIFSPVVKMSSIRVVLGLAASLDLEVEQMDVKAAFLHGDLEEEIYMVQPEGFVKKGKE-DLVCRLKKSLYGLKQAPRQWYKKFKSVMGEHGYKETTSDHCV-FVQVFGDDDFIILLLYVDDMLIVGRNVSRIQELKKHLSQSFAMKDLGPAKQILGMRIVRDRGERLIHLSQEKYIEKVLRRFHMDKSKVVSTPLAAHFRLSSQQSPSTELEKQDMARV-----PYASAVGSLMYAMVCTRPDLAHAVGVVSRFLSNPGRDHWTAVK--WILRYLRGTSSLKLTFGGTKPLLVSYTDSDMSGDVDSRKSTSGYLVTFAGGAVAWQSRLQKCVALSTTEAEFIAATEACKEVLWMKNFLADIGFKQDKYVLLCDSQSAICLGKNSTFHSRSKHIDRRYHWIRDVVASKEVELEKVHTDDNGADMMTKSLPRWK 1300          
BLAST of mRNA_H-paniculata_contig1977.5030.1 vs. uniprot
Match: Q6BCY1_IPOBA (Gag-Pol n=1 Tax=Ipomoea batatas TaxID=4120 RepID=Q6BCY1_IPOBA)

HSP 1 Score: 328 bits (842), Expect = 7.810e-94
Identity = 240/771 (31.13%), Postives = 378/771 (49.03%), Query Frame = 1
Query:   22 NGLQMKRLRSKQGREFTGEEFRQFCAENSIKQEFSVAYTPQQNGVAERSWRTVFETTRSEMIIANMGCRYWVEAARAAVYCLNRASTRPHNGGLPHEKWHVTTPKLDHLRVFGCTAYVMFQSQQRRKLDDKTWLRVFLGHYEDSPSYRIYRPENKSVQLSRNVRFDEENFVTAH---HGQLEHDGTRDIEGLFSAPSVTPAVTRSR------ARGEETSRILKRARARENREEN---SGSAARVAKVEDTSNPTRAVSEEEPKCAAAALKNQEADKWRAAM-----TFVKTWTWESEDRGRLPVGWKAISTKWIIKRKLKEEGSVPRYKARLVAQSFSQVGGEDFFETSALVAHMSTLHTVFSLATKHDFELEGMGVDVAYLNAPMEEELFVKLPSEFFPFSRDIPFVRRLRKRPYDLKQSSRNWNNTLDDFLVGIGLQRSTTDPCL*FSRDEGGETDILVAIYVDYLVIARRH-EKVDKFKDNISWRFTMKDLGSLSRVLGIDVRRDRPNGTISISQGDYIREVLKRHVFDECRGVPTPVEERVEILASESADKPREPNPIGAVLGNSTEYRGMVGTLMCASTGTRPDIAYAVHQEARRMEDPCREDFSTCNRIFVIAVLRLTSALR---SAVRVMVTIWKDSLMPIGRKMSRTESPQRDTLPS*TVVR*VGVLGSNS*SCTEAEYIAAGEVGKEAVYLRDLQGSIGFGCRGSTTLLEDKSAINLSKGSDTHCRTKHIGVRWHGIREWVREGILALKYVQTGDHLADILT 2271
            +G ++K  R+  G E+T EEF  FC +  IK++F+VAYTPQQNGVAER  RT+ E TR+ +  A +   +W EA   A Y +NRA +       P E W        +L +FG   Y M+ +Q+  KLD K+    FLG+ +    YR++ P    V +SR+V F E+           + E   T  I                       + G  T+R   R + R     +    G+ A     ED           EP     A+ + +  +W AAM        K  TW   D   LP G K I  KW+ K K   +  V RY+ARLV + ++Q  G DF E  + V  ++T+  V ++    +  LE + V  A+L+  +EEE+++  P E F    +   V RL K  Y LKQ+ R W    D F++ +G  R   DPC  F R  G +  +++ +YVD +++A  + + +D+ K  ++  F MKDLG  +++LG+ + RDR N  I +SQ +Y++++L R    +C+ + TP+   +++ +S S       N  G +  +   Y   VG+LM A   TRPDIA AV   +R M +P RE ++   RI  +  ++ TS +         ++  + DS        S++ +     +    V     +    + S TEAEY+AA +  KEA++L+ L   +G      +   + +SA++L++    H RTKHI V++H IRE V+EG + L+ + T D++AD LT
Sbjct:  530 SGKKIKCFRTDNGGEYTSEEFDDFCKKEGIKRQFTVAYTPQQNGVAERMNRTLLERTRAMLRAAGLEKSFWAEAVNTACYLVNRAPSTAIELKTPMEMWTGKPVDYSNLHIFGSIVYAMYNAQEITKLDPKSRKCRFLGYADGVKGYRLWDPTAHKVVISRDVIFVEDRLQRGEVDDSTEKEKPETTQIXXXXXXXXXXXXXXXXXXXXXXXSSGAPTTRQSDREKRRPTWHSDYVMEGNVAYCLLTEDG----------EPSTFQEAINSSDVSQWTAAMQEEIEALHKNNTW---DLVPLPQGRKPIGNKWVFKIKRNGDDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRVVLAMCATFNLHLEQLDVKTAFLHGDLEEEIYMLQP-EGFEDKENQNLVCRLNKSLYGLKQAPRCWYKRFDSFIMCLGYNRLNADPCAYFKRF-GKDNFVILLLYVDDMLVAGPNKDHIDELKAQLAREFEMKDLGPANKILGMQIHRDRGNRKIWLSQKNYLKKILSRFSMQDCKSISTPLPINLKVSSSMSPS-----NEEGRMEMSRVPYASAVGSLMFAMICTRPDIAQAVGVVSRYMANPGREHWNCVKRI--LRYIKGTSDVALCYGGSDFIINGYVDSDYAGDLDKSKSTTGYVFKVAGGAVSWVSKLQAVVATSTTEAEYVAATQASKEAIWLKMLLEELGHKQEFVSLFCDSQSALHLARNPAFHSRTKHIRVQYHFIREKVKEGTVDLQKIHTADNVADFLT 1278          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1977.5030.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A498M2F0_LABRO2.060e-10332.26Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A151R6U8_CAJCA7.810e-10231.52Retrovirus-related Pol polyprotein from transposon... [more]
A0A2N9IUS6_FAGSY1.310e-9831.51Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
B8YLY6_MEDTR5.480e-9731.01Gag-Pol polyprotein n=4 Tax=Medicago truncatula Ta... [more]
B8YLY7_LOTJA3.470e-9531.49Gag-Pol polyprotein n=1 Tax=Lotus japonicus TaxID=... [more]
A0A438JDY0_VITVI4.840e-9531.61Retrovirus-related Pol polyprotein from transposon... [more]
A0A438E432_VITVI8.830e-9530.58Retrovirus-related Pol polyprotein from transposon... [more]
A0A1J3IBS4_NOCCA2.490e-9431.58Retrovirus-related Pol polyprotein from transposon... [more]
A0A6D2HJZ4_9BRAS4.860e-9430.53Integrase catalytic domain-containing protein n=3 ... [more]
Q6BCY1_IPOBA7.810e-9431.13Gag-Pol n=1 Tax=Ipomoea batatas TaxID=4120 RepID=Q... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1977contigH-paniculata_contig1977:4564..7136 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score82.0
Seed ortholog evalue2.9e-13
Seed eggNOG ortholog164328.Phyra71113
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs3Q8Z1@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons4
Model size2292
Cds size519
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1977.5030.1prot_H-paniculata_contig1977.5030.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1977 6237..6800 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929493.69205-UTR-H-paniculata_contig1977:4563..52101622929493.69205-UTR-H-paniculata_contig1977:4563..5210Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1977 4564..5210 +
1691480885.9071717-UTR-H-paniculata_contig1977:4563..52101691480885.9071717-UTR-H-paniculata_contig1977:4563..5210Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1977 4564..5210 +
1622929493.7152936-UTR-H-paniculata_contig1977:5431..56111622929493.7152936-UTR-H-paniculata_contig1977:5431..5611Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1977 5432..5611 +
1691480885.9226904-UTR-H-paniculata_contig1977:5431..56111691480885.9226904-UTR-H-paniculata_contig1977:5431..5611Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1977 5432..5611 +
1622929493.729249-UTR-H-paniculata_contig1977:5626..62361622929493.729249-UTR-H-paniculata_contig1977:5626..6236Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1977 5627..6236 +
1691480885.938192-UTR-H-paniculata_contig1977:5626..62361691480885.938192-UTR-H-paniculata_contig1977:5626..6236Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1977 5627..6236 +
1622929493.7902129-UTR-H-paniculata_contig1977:6800..71361622929493.7902129-UTR-H-paniculata_contig1977:6800..7136Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1977 6801..7136 +
1691480885.9740806-UTR-H-paniculata_contig1977:6800..71361691480885.9740806-UTR-H-paniculata_contig1977:6800..7136Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1977 6801..7136 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929493.7622898-CDS-H-paniculata_contig1977:6236..64631622929493.7622898-CDS-H-paniculata_contig1977:6236..6463Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1977 6237..6463 +
1691480885.9508476-CDS-H-paniculata_contig1977:6236..64631691480885.9508476-CDS-H-paniculata_contig1977:6236..6463Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1977 6237..6463 +
1622929493.7751286-CDS-H-paniculata_contig1977:6508..68001622929493.7751286-CDS-H-paniculata_contig1977:6508..6800Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1977 6509..6800 +
1691480885.9609685-CDS-H-paniculata_contig1977:6508..68001691480885.9609685-CDS-H-paniculata_contig1977:6508..6800Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1977 6509..6800 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1977.5030.1

>prot_H-paniculata_contig1977.5030.1 ID=prot_H-paniculata_contig1977.5030.1|Name=mRNA_H-paniculata_contig1977.5030.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=173bp
MKDLGSLSRVLGIDVRRDRPNGTISISQGDYIREVLKRHVFDECRGVPTP
VEERVEILASESADKPREPNPIGAVLGNSTEYRGMVGTLMCASTGTRPDI
AYAVHQEARRMEDPCREDFSTCNRIFVIAVLRLTSALRSAVRVMVTIWKD
SLMPIGRKMSRTESPQRDTLPS*
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mRNA from alignment at H-paniculata_contig1977:4564..7136+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1977.5030.1 ID=mRNA_H-paniculata_contig1977.5030.1|Name=mRNA_H-paniculata_contig1977.5030.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2573bp|location=Sequence derived from alignment at H-paniculata_contig1977:4564..7136+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GAGCGGGATATTGCGAAGGCAAACGGGCTACAAATGAAACGTCTTCGGTC AAAACAAGGACGAGAGTTTACAGGAGAAGAGTTCCGACAATTTTGTGCGG AAAATAGCATCAAGCAAGAATTTTCTGTCGCCTACACGCCGCAGCAAAAC GGTGTGGCGGAGCGCAGCTGGCGTACCGTTTTCGAGACGACCCGAAGTGA GATGATCATCGCCAACATGGGTTGCAGGTATTGGGTGGAGGCGGCGCGCG CGGCTGTGTACTGCTTAAATCGCGCCTCGACGCGACCGCACAATGGAGGG CTGCCGCATGAGAAATGGCACGTCACGACACCAAAGCTTGACCACCTTCG TGTCTTCGGCTGCACGGCATACGTGATGTTCCAGTCGCAGCAGAGACGCA AACTCGATGACAAAACATGGTTGAGAGTGTTTCTGGGGCACTACGAGGAC AGCCCAAGCTATCGCATATATCGCCCGGAAAACAAGAGCGTCCAGTTGAG CAGGAACGTAAGATTTGATGAAGAGAATTTCGTAACAGCTCATCACGGAC AGCTGGAGCACGACGGAACGCGAGACATAGAAGGTCTTTTTTCAGCACCG TCGGTCACACCAGCGGTCACGCGATCTCGCGCCCGAGGCGAGGAGACGTA ACCAACACGGAAAAATCGACGCCAACGTCGTCAGCCGCCAGCGCCAACCC ATAGAGTGCCTTGAGCGATGACGATACTCATGAAGATAATGATGATTCGG AGGTGTACGATGCTGAACCAGAAACCGAAGACACATCATCAGCGGAGACA TAGGCGCCCACACCTCGGGGGGAGACCAGGACAGAGGCAGGGACAGAGGA GCCGCGACCGCGAGATAGATCACGAATATTGAAACGGGCGAGAGCGAGGG AAAACCGCGAAGAGAATTCAGGCTCTGCCGCGCGCGTGGCTAAAGTGGAA GACACCAGCAACCCTACACGGGCGGTATCTGAGGAAGAGCCGAAATGTGC AGCAGCAGCATTGAAGAACCAAGAGGCAGATAAATGGCGCGCGGCAATGT AGGAGGAATGAAGGACATTCGTAAAAACTTGGACGTGGGAGAGCGAGGAC CGGGGGAGGTTACCGGTGGGATGGAAGGCGATCTCAACCAAATGGATTAT CAAGCGCAAATTGAAGGAGGAAGGCAGCGTGCCACGCTACAAAGCGCGAC TTGTGGCTCAAAGTTTTTCACAGGTGGGGGGCGAAGATTTCTTTGAAACC AGTGCCCTCGTAGCTCACATGTCGACATTGCATACTGTTTTTAGCCTGGC CACCAAACATGATTTCGAACTAGAAGGCATGGGCGTAGATGTGGCGTATT TAAACGCCCCCATGGAAGAAGAGCTGTTTGTTAAGCTACCCTCTGAGTTT TTTCCTTTTTCCCGAGACATACCGTTTGTACGCCGCCTGCGTAAAAGACC CTATGACCTCAAGCAGAGCAGTCGAAACTGGAATAACACTCTTGACGATT TTCTTGTTGGGATAGGACTCCAGCGTTCCACTACCGACCCATGCTTGTAG TTCTCTCGCGACGAAGGGGGAGAGACAGATATTCTCGTGGCCATCTATGT TGACTACCTGGTAATCGCTCGACGTCATGAAAAAGTAGACAAGTTCAAGG ACAACATAAGTTGGCGTTTTACGATGAAAGACTTGGGCTCCCTCTCGCGC GTGTTGGGAATAGACGTACGACGTGACCGCCCCAATGGTACCATATCAAT ATCCCAAGGTGACTACATCCGCGAGGTACTGAAAAGACACGTTTTTGACG AGTGTCGAGGCGTGCCCACCCCTGTGGAGGAAAGAGTGGAGATTTTGGCA TCCGAGTCGGCCGACAAGCCCCGCGAACCGAATCCAATTGGGGCTGTACT GTCGGACATAGGCGCAGGAGTACAAGAAAGCAGCAGTGGGAGAAGTGGTA ATTCAACTGAATACAGAGGCATGGTAGGAACACTCATGTGCGCCTCGACA GGAACTAGACCTGATATAGCATACGCGGTACACCAAGAAGCACGCCGTAT GGAGGACCCATGTCGGGAAGACTTCAGTACATGCAACCGCATTTTCGTTA TAGCAGTCCTGCGCCTGACCTCGGCATTACGTTCGGCGGTAAGAGTAATG GTCACGATCTGGAAGGATTCGTTGATGCCGATTGGGCGGAAGATGTCGAG GACCGAAAGTCCACAACGGGATACATTACCAAGCTGAACGGTGGTGCGAT AAGTTGGTGTTCTAGGAAGCAACAGTTAGTCATGCACAGAGGCAGAGTAC ATTGCTGCAGGAGAAGTGGGAAAGGAGGCGGTATATCTTAGGGATTTACA AGGATCGATAGGTTTCGGATGCAGGGGGAGCACGACATTACTTGAGGACA AGTCAGCTATCAATCTCAGTAAGGGATCTGACACACACTGCAGGACAAAG CACATCGGAGTGCGCTGGCACGGAATCCGAGAGTGGGTTCGGGAAGGAAT ATTGGCGTTGAAATACGTGCAGACCGGCGACCACCTTGCTGACATTTTAA CGACAGGACTGAGCAGAGTGAAG
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Coding sequence (CDS) from alignment at H-paniculata_contig1977:4564..7136+

>mRNA_H-paniculata_contig1977.5030.1 ID=mRNA_H-paniculata_contig1977.5030.1|Name=mRNA_H-paniculata_contig1977.5030.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1038bp|location=Sequence derived from alignment at H-paniculata_contig1977:4564..7136+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAAGACTTGGGCTCCCTCTCGCGCGTGTTGGGAATAGACGTACGACG
TGACCGCCCCAATGGTACCATATCAATATCCCAAGGTGACTACATCCGCG
AGGTACTGAAAAGACACGTTTTTGACGAGTGTCGAGGCGTGCCCACCCCT
GTGGAGGAAAGAGTGGAGATTTTGGCATCCGAGTCGGCCGACAAGCCCCG
CGAACCGAATCCAATTGGGGCTGTACTATGAAAGACTTGGGCTCCCTCTC
GCGCGTGTTGGGAATAGACGTACGACGTGACCGCCCCAATGGTACCATAT
CAATATCCCAAGGTGACTACATCCGCGAGGTACTGAAAAGACACGTTTTT
GACGAGTGTCGAGGCGTGCCCACCCCTGTGGAGGAAAGAGTGGAGATTTT
GGCATCCGAGTCGGCCGACAAGCCCCGCGAACCGAATCCAATTGGGGCTG
TACTTGGTAATTCAACTGAATACAGAGGCATGGTAGGAACACTCATGTGC
GCCTCGACAGGAACTAGACCTGATATAGCATACGCGGTACACCAAGAAGC
ACGCCGTATGGAGGACCCATGTCGGGAAGACTTCAGTACATGCAACCGCA
TTTTCGTTATAGCAGTCCTGCGCCTGACCTCGGCATTACGTTCGGCGGTA
AGAGTAATGGTCACGATCTGGAAGGATTCGTTGATGCCGATTGGGCGGAA
GATGTCGAGGACCGAAAGTCCACAACGGGATACATTACCAAGCTGATGGT
AATTCAACTGAATACAGAGGCATGGTAGGAACACTCATGTGCGCCTCGAC
AGGAACTAGACCTGATATAGCATACGCGGTACACCAAGAAGCACGCCGTA
TGGAGGACCCATGTCGGGAAGACTTCAGTACATGCAACCGCATTTTCGTT
ATAGCAGTCCTGCGCCTGACCTCGGCATTACGTTCGGCGGTAAGAGTAAT
GGTCACGATCTGGAAGGATTCGTTGATGCCGATTGGGCGGAAGATGTCGA
GGACCGAAAGTCCACAACGGGATACATTACCAAGCTGA
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