mRNA_H-paniculata_contig1977.5030.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1977.5030.1 vs. uniprot
Match: A0A498M2F0_LABRO (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Labeo rohita TaxID=84645 RepID=A0A498M2F0_LABRO) HSP 1 Score: 343 bits (881), Expect = 2.060e-103 Identity = 251/778 (32.26%), Postives = 388/778 (49.87%), Query Frame = 1
Query: 16 KANGLQMKRLRSKQGREFTGEEFRQFCAENSIKQEFSVAYTPQQNGVAERSWRTVFETTRSEMIIANMGCRYWVEAARAAVYCLNRASTRPHNGGLPHEKWHVTTPKLDHLRVFGCTAYVMFQSQQRRKLDDKTWLRVFLGHYEDSPSYRIYRPENKSVQLSRNVRFDEENFVTAHHGQLEHDGT--RDIEGLFSAPSVTPAVTRSRARGEETSRILKRARARENREENSGSAARVAKVEDTSNPTRAVSEEEPKCAAAALKNQEADKWRAAM-----TFVKTWTWESEDRGRLPVGWKAISTKWIIKRKLKEEGSVPRYKARLVAQSFSQVGGEDFFETSALVAHMSTLHTVFSLATKHDFELEGMGVDVAYLNAPMEEELFVKLPSEFFPFSRDIPFVRRLRKRPYDLKQSSRNWNNTLDDFLVGIGLQRSTTDPCL*FSRDEGGETDILVAIYVDYLVIARRHEK-VDKFKDNISWRFTMKDLGSLSRVLGIDVRRDRPNGTISISQGDYIREVLKRHVFDECRGVPTPVEERVEILASESADKPREPNPIGAVLGNSTEYRGMVGTLMCASTGTRPDIAYAVHQEARRMEDPCREDFSTCNRIFVIAVLRLTSALRSAVRVMVTIWKDSLMP-IGRKMSRTESPQRDTLP-S*TVVR*VGVLGS--------NS*SCTEAEYIAAGEVGKEAVYLRDLQGSIGFGCRGSTTLLED-KSAINLSKGSDTHCRTKHIGVRWHGIREWVREGILALKYVQTGDHLADILTTGLSRVK 2292
K+ G Q+K LR+ G E+T EF+ F + I+ E +V TP+QNGVAER +T+ ET RS + A + ++W EA AVY NR+ T+ G P E W PK+DHLR+FGCT Y +R+KLD K + LG+ ++ YR+Y + V SR+V F+E N DG R +E P + + R E R+ K + G VA SNPT EPK L + + KW+ AM + W + LP G KA+ +KW+ K K+ +G+ R+KARLVAQ FSQ G D+ ET + V ++ T+ + A ++ +L M V A+LN ++EE++++ P F ++ V +L + Y LKQS R WN LD+ L +G ++T DPC+ + GE ++A+YVD +++A +K + + K ++ F +KD+G L+ LG+ + + G I + Q Y VLK+ + + V TPV+ +++ + +P +++ VG+L+ ST TRPDIAYAV+ AR P ++ ++ AV R+ L+ + + + KD IG + Q D S + + G S + S EAEY+A +EAV++R L + G T + ED +SAI ++K S H R KHI +++H IRE + G++ L+Y T D +AD+ T GLS+ K
Sbjct: 4 KSTGRQLKVLRTDNGGEYTSSEFQDFLKKEGIRHELTVPKTPEQNGVAERMNKTLMETVRSMLADAKLPQKFWAEALSTAVYLRNRSPTKSVKGMTPFEAWTGEKPKVDHLRIFGCTVYAHVPKDERKKLDPKAKKCILLGYGTETKGYRLYDSKLAKVFFSRDVIFNESNHAFEKEPVANEDGAVNRYVEFDCQEPDNEESPEQKVQRSE---RLRKPP-------DYYGEWVTVA-----SNPTT-----EPKTVKDVLSSPDKAKWKEAMEKEMESLYANNVWNLVE---LPKGRKAVGSKWVFKVKVDADGTFERHKARLVAQGFSQKFGSDYDETFSPVVRFESVRTIIAQAVQYGLKLHQMDVKTAFLNGELKEEVYMQQPEGFVVKGKEH-LVCKLNRSIYGLKQSPRCWNIVLDEQLKKMGFVQTTGDPCIYTAAT--GEM-FIIAVYVDDILLAGCSDKRMMEVKKMLAKHFEIKDMGELTHFLGVKIIQKPETGEIWMGQATYAENVLKKFGMENSKPVSTPVDINTKLVKHSDDSEVMDPK----------QFQSAVGSLLYLSTRTRPDIAYAVNNVARFCAKPTKQHWT--------AVKRIMRYLKGTLNLGLLYNKDKPKECIGFSDADWAGDQNDRKSMSGYMFQISGAAVSWRSKKQTCVALSTAEAEYMALASAAQEAVWMRQLMTDLKVNQAGPTVMFEDNQSAICMAKNSQFHGRAKHIDIKYHFIREKIAGGVIDLQYCNTDDMVADMFTKGLSQEK 736
BLAST of mRNA_H-paniculata_contig1977.5030.1 vs. uniprot
Match: A0A151R6U8_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=5 Tax=Cajanus cajan TaxID=3821 RepID=A0A151R6U8_CAJCA) HSP 1 Score: 350 bits (898), Expect = 7.810e-102 Identity = 243/771 (31.52%), Postives = 389/771 (50.45%), Query Frame = 1
Query: 25 GLQMKRLRSKQGREFTGEEFRQFCAENSIKQEFSVAYTPQQNGVAERSWRTVFETTRSEMIIANMGCRYWVEAARAAVYCLNRASTRPHNGGLPHEKWHVTTPKLDHLRVFGCTAYVMFQSQQRRKLDDKTWLRVFLGHYEDSPSYRIYRPENKSVQLSRNVRFDEENFVTAHHGQLEHDGTRDIEGLFSAPSVTPAVTRSRARGEETSRILKRARARENREENSGSAARVAKVEDTSNPT--------------RAVSEEEPKCAAAALKNQEADKWRAAM-----TFVKTWTWESEDRGRLPVGWKAISTKWIIKRKLKEEGSVPRYKARLVAQSFSQVGGEDFFETSALVAHMSTLHTVFSLATKHDFELEGMGVDVAYLNAPMEEELFVKLPSEFFPFSRDIPFVRRLRKRPYDLKQSSRNWNNTLDDFLVGIGLQRSTTDPCL*FSRDEGGETDILVAIYVDYLVIARRHEKVDKFKDNISWRFTMKDLGSLSRVLGIDVRRDRPNGTISISQGDYIREVLKRHVFDECRGVPTPVEERVEILASESADKPREPNPIGAVLGNSTEYRGMVGTLMCASTGTRPDIAYAVHQEARRMEDPCREDFSTCNRIFVIAVLRLTSALR---SAVRVMVTIWKDSLMPIGRKMSRTESPQRDTLPS*TVVR*VGVLGSNS*SCTEAEYIAAGEVGKEAVYLRDLQGSIGFGCRGSTTLLEDKSAINLSKGSDTHCRTKHIGVRWHGIREWVREGILALKYVQTGDHLADILT 2271
G ++K LR+ G E+ +F FC + IK++F+VA+TPQQNGVAER RT+ E TR+ + A + +W EA + A Y +NR+ + P E W+ L VFGC YVM+ SQ+R KLD K+ +FLG+ ++ YR++ P + V +SR+V F E T + E+D T S+ +S+ ++TS + +E E+N G R + T P+ E EP AL++ + +W AAM + TWE D LP G KAI KW+ K K V RY+ARLV + ++Q G DF E + V ++T+ V ++ + LE + V A+L+ ++EE+++ P F ++ V RL K Y LKQ+ R W D F++ +G R ++D C ++R + + IL+ D LV+ +++ + K ++ F MKDLG +++LG+ + RDR N I +SQ +Y+ +VL+R +C+ + TP+ ++ +S S E + V Y VG+LM A TRPDIA AV +R M DP RE +S RI + ++ TS + V + DS ++ + TL V + + S TEAEY+AA + KEA++++ L +G T + +SA+++++ H RTKHIG+++H +RE V EG + ++ + T D++AD++T
Sbjct: 491 GKRIKCLRTDNGGEYIDGDFLAFCKQEGIKRQFTVAHTPQQNGVAERMNRTLLERTRAMLRTAGLAKSFWAEAVKTACYLINRSPSTAIGLKTPMEMWNGKPSNYSSLHVFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVFAE----TELQKEQENDST------IKDTSIVEIGGKSKE--DDTSEAEQEHDEQEPNEDNDGDVRRTTR--QTKKPSWHSDYVMASHDAYCLLTEEGEPSTFQEALRSSDVSQWMAAMHEEIEALHRNKTWELVD---LPKGRKAIGCKWVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRVVLAMCAAFNLHLEQLDVKTAFLHGELQEEIYMLQPEGFKEQGKEN-LVCRLTKSLYGLKQAPRCWYKRFDSFIISLGYNRLSSDHCTYYNRFDDNDFIILLLYVDDMLVVGPNKDQIQELKAQLAREFDMKDLGPANKILGMQIHRDRKNRRIWLSQKNYLLKVLRRFNMQDCKPISTPLPVNYKLSSSMSPSNEAERMEMSRV-----PYASAVGSLMYAMICTRPDIAQAVGAVSRFMADPGREHWSIVKRI--LRYIKGTSDVALCFEGSEFFVRGYVDSDFAGDLDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWIQRLLEELGHKQEKITVYCDSQSALHIARNPAFHSRTKHIGIQYHFVREVVEEGKVDMQKIHTKDNIADVMT 1236
BLAST of mRNA_H-paniculata_contig1977.5030.1 vs. uniprot
Match: A0A2N9IUS6_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9IUS6_FAGSY) HSP 1 Score: 346 bits (887), Expect = 1.310e-98 Identity = 248/787 (31.51%), Postives = 377/787 (47.90%), Query Frame = 1
Query: 34 MKRLRSKQGREFTGEEFRQFCAENSIKQEFSVAYTPQQNGVAERSWRTVFETTRSEMIIANMGCRYWVEAARAAVYCLNRASTRPHNGGLPHEKWHVTTPKLDHLRVFGCTAYVMFQSQQRRKLDDKTWLRVFLGHYEDSPSYRIYRPENKSVQLSRNVRFDEENFVTAHH--------------------------GQLEHDGTRDIEGLFSAPSVTPAVTRSRARGEETSRILKRARARENREENSGSAARVAKVEDTSNPTRAVSEEEPKCAAAALKNQEADKWRAAM-----TFVKTWTWESEDRGRLPVGWKAISTKWIIKRKLKEEGSVPRYKARLVAQSFSQVGGEDFFETSALVAHMSTLHTVFSLATKHDFELEGMGVDVAYLNAPMEEELFVKLPSEFFPFSRDIPFVRRLRKRPYDLKQSSRNWNNTLDDFLVGIGLQRSTTDPCL*FSRDEGGETDILVAIYVDYLVIARRHEKVDKFKDNISWRFTMKDLGSLSRVLGIDVRRDRPNGTISISQGDYIREVLKRHVFDECRGVPTPVEERVEILASESADKPREPNPIGAVLGNSTEYRGMVGTLMCASTGTRPDIAYAVHQEARRMEDPCREDFSTCNRIFVIAVLRLTSALR---SAVRVMVTIWKDSLMPIGRKMSRTESPQRDTLPS*TVVR*VGVLGSNS*SCTEAEYIAAGEVGKEAVYLRDLQGSIGFGCRGSTTLLEDKSAINLSKGSDTHCRTKHIGVRWHGIREWVREGILALKYVQTGDHLADILTTGLSRVK 2292
+K LR+ G E+TG EF FC + IK++F+VAYTPQQNGVAER RT+ E TR+ + A M +W EA + A Y +NR+ + + P E W HL FG YVM+ +Q+ KLD K+ VFLG+ + YR++ P + V +SR+V F E+ + + + F+ P V + R + I++ G+ A ED EP A K+QEA W AM K TW D LP G KAI KW+ K K V RY+ARLV + F+Q G DF E + V ++T+ V ++ D LE + V A+L+ +EEE+++ P F ++ V +L K Y LKQ+ R W D F++ +G R ++DPC+ + R G IL+ D LV +++ K ++ F MKDLG +++LG+ + RDR N I +SQ +Y++++L+R +C+ +PTP+ ++ +S S E + V Y VG+LM A TRPDIA AV +R M +P +E +S RI + ++ TS + V + DS S++ S TL V + + S TEAEY+AA + KEA++L+ L +G + +SA++L+K H +TKHI V++H +RE V EG + ++ + T D+LAD+LT ++ K
Sbjct: 1629 IKCLRTDNGGEYTGVEFDSFCQQEGIKRQFTVAYTPQQNGVAERMNRTLLERTRAMLRTAGMAKTFWAEAVKTACYVINRSPSTAIDLKTPMEMWTGKPADYSHLHTFGSPVYVMYNAQEASKLDPKSRKCVFLGYADGVKGYRLWDPTARKVLISRDVIFVEDKVQEKENDXXXXXXXXXXXXXXXXXXXXXXPDSSEXXXXXXXXXQAEFATPQVRRSTRERREPAWHSEYIME------------GNVAYCLLTEDG----------EPSTFHEATKSQEAPMWMVAMQEEIEALHKNKTW---DLVPLPQGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGFAQKEGIDFNEIFSPVVRLTTVRVVLAMCATFDLYLEQLDVKTAFLHGELEEEIYMLQPEGFEEKGKEN-LVCKLNKSLYGLKQAPRCWYKRFDSFIMSLGYNRHSSDPCVYYKRFGDGNFIILLLYVDDMLVAGPNKDRITDLKAQLAREFEMKDLGPANKILGMQIYRDRNNRKIWLSQKNYLKKILRRFNMQDCKPIPTPLPINFKLSSSMSPSNEAERMEMSRV-----PYASAVGSLMFAMVCTRPDIAQAVGVVSRYMVNPGKEHWSAVKRI--LRYVKGTSNVALCYGGSDFTVRGYVDSDYAGDLDKSKSTSGYVFTLAGGAVSWVSKLQSIVATSTTEAEYVAATQASKEAIWLQMLLEELGHKQEKIALFCDSQSALHLAKNPAFHSKTKHIRVQYHFVREKVEEGSVDIQKIHTKDNLADMLTKPINNDK 2382
BLAST of mRNA_H-paniculata_contig1977.5030.1 vs. uniprot
Match: B8YLY6_MEDTR (Gag-Pol polyprotein n=4 Tax=Medicago truncatula TaxID=3880 RepID=B8YLY6_MEDTR) HSP 1 Score: 337 bits (865), Expect = 5.480e-97 Identity = 236/761 (31.01%), Postives = 374/761 (49.15%), Query Frame = 1
Query: 34 MKRLRSKQGREFTGEEFRQFCAENSIKQEFSVAYTPQQNGVAERSWRTVFETTRSEMIIANMGCRYWVEAARAAVYCLNRASTRPHNGGLPHEKWHVTTPKLDHLRVFGCTAYVMFQSQQRRKLDDKTWLRVFLGHYEDSPSYRIYRPENKSVQLSRNVRFDEENFVTAHHGQLEHDGTRDIEGLFSAPSVTPAVTRSRARGEETSRILKRARARENREENSGSAARVAKVEDTSNPTRAVSEEEPKCAAAALKNQEADKWRAAM-----TFVKTWTWESEDRGRLPVGWKAISTKWIIKRKLKEEGSVPRYKARLVAQSFSQVGGEDFFETSALVAHMSTLHTVFSLATKHDFELEGMGVDVAYLNAPMEEELFVKLPSEFFPFSRDIPFVRRLRKRPYDLKQSSRNWNNTLDDFLVGIGLQRSTTDPCL*FSRDEGGETDILVAIYVDYLVIARRHEKVDKFKDNISWRFTMKDLGSLSRVLGIDVRRDRPNGTISISQGDYIREVLKRHVFDECRGVPTPVEERVEILASESADKPREPNPIGAVLGNSTEYRGMVGTLMCASTGTRPDIAYAVHQEARRMEDPCREDFSTCNRIFVIAVLRLTSALRSAVRVM-VTIWK--DSLMPIGRKMSRTESPQRDTLPS*TVVR*VGVLGSNS*SCTEAEYIAAGEVGKEAVYLRDLQGSIGFGCRGSTTLLEDKSAINLSKGSDTHCRTKHIGVRWHGIREWVREGILALKYVQTGDHLADILTTGLSRVK 2292
+K LR+ G E+ EF FC + I ++F+VA+TPQQNGVAER RT+ E TR+ + A M +W EAA+ A Y +NR+ + + P E W L VFGC YVM+ SQ++ KLD K+ +FLG+ ++ YR++ P + V +SR+V F E + T ++ + + R R R+ S + E EP AL +A +W AM + TWE + LP G KAI KW+ K K V RY+ARLV + ++Q G DF E + V ++T+ V ++ D LE + V A+L+ +EEE+++ P F ++ V RL K Y LKQ+ R W D F++ + R ++D C + R +G + IL+ D LV+ ++V + K ++ F MKDLG +++LG+ + RDR + I +SQ +Y+R+VL+R +C+ + TP+ ++ + S E + V Y VG+LM A TRPDIA AV +R M DP +E ++ RI + ++ TS + +T+W DS ++ + TL V + + S TEAEY+AA + KEA++++ L +G T + +SA+++++ H RTKHIGV++H +RE V EG + ++ + T D+LAD++T ++ K
Sbjct: 544 IKCLRTDNGGEYVDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAGMAKSFWAEAAKTACYVINRSPSTAIDLKTPMEMWKGKPVDYSSLHVFGCPVYVMYNSQEKTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVFAENELQSEQKNDSTSKETAIVQMEEKSKXXXXXXXXXXXXXXXXXXVNDGVR-RSTRQTQKPSWQSDYVMTSHDAYCLITEEGEPSTFHEALNGSDASQWMTAMHEEMEALHRNKTWELVE---LPKGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRVVLAMCAALDLHLEQLDVKTAFLHGELEEEIYMLQPEGFKEQGKEN-LVCRLTKSLYGLKQAPRCWYKRFDSFIISLDYNRLSSDHCTYYKRFDGNDFIILLLYVDDMLVVGPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLRKVLRRFNMQDCKPISTPLPVNFKLSSGMSPSNEAERMEMSRV-----PYASAVGSLMYAMICTRPDIAQAVGVVSRFMADPGKEHWNAVKRI--MRYIKGTSGVAVCFGGSELTVWGYVDSDFAGDHDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWMQRLMEELGHKQEQITVYCDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEEGSVDMQKIHTNDNLADVMTKPINTDK 1292
BLAST of mRNA_H-paniculata_contig1977.5030.1 vs. uniprot
Match: B8YLY7_LOTJA (Gag-Pol polyprotein n=1 Tax=Lotus japonicus TaxID=34305 RepID=B8YLY7_LOTJA) HSP 1 Score: 332 bits (852), Expect = 3.470e-95 Identity = 245/778 (31.49%), Postives = 383/778 (49.23%), Query Frame = 1
Query: 25 GLQMKRLRSKQGREFTGEEFRQFCAENSIKQEFSVAYTPQQNGVAERSWRTVFETTRSEMIIANMGCRYWVEAARAAVYCLNRASTRPHNGGLPHEKWHVTTPKLDHLRVFGCTAYVMFQSQQRRKLDDKTWLRVFLGHYEDSPSYRIYRPENKSVQLSRNVRFDEENFVTAHHGQLEHDGTRDIEGLFSAPSVTPAVTRSRARGEETSRI-----------LKRARARENREENSGSAARVAKVEDTSNPTRAVSEE-EPKCAAAALKNQEADKWRAAM-----TFVKTWTWESEDRGRLPVGWKAISTKWIIKRKLKEEGSVPRYKARLVAQSFSQVGGEDFFETSALVAHMSTLHTVFSLATKHDFELEGMGVDVAYLNAPMEEELFVKLPSEFFPFSRDIPFVRRLRKRPYDLKQSSRNWNNTLDDFLVGIGLQRSTTDPCL*FSRDEGGETDILVAIYVDYLVIARRHEKVDKFKDNISWRFTMKDLGSLSRVLGIDVRRDRPNGTISISQGDYIREVLKRHVFDECRGVPTPVEERVEILASESADKPREPNPIGAVLGNSTEYRGMVGTLMCASTGTRPDIAYAVHQEARRMEDPCREDFSTCNRIFVIAVLRLTSALR-----SAVRVMVTIWKDSLMPIGRKMSRTESPQRDTLPS*TVVR*VGVLGSNS*SCTEAEYIAAGEVGKEAVYLRDLQGSIGFGCRGSTTLLEDKSAINLSKGSDTHCRTKHIGVRWHGIREWVREGILALKYVQTGDHLADILTTGLSRVK 2292
G ++K LR+ G E+T +F FC + I ++F+VA+TPQQNGVAER RT+ E TR+ + A + +W EAA+ A Y +NR+ + P E W LRVFGC YVM+ SQ+R KLD K+ FLG+ ++ YR++ P + + +SR+V F E + ++DGT T V GEE S A R + + V + + +SE+ EP A+ +A W AAM + TWE + LP G KAI KW+ K K V RY+ARLV + ++Q G DF E + V ++T+ V ++ + LE + V A+L+ +EEE+++ P F R+ V RL K Y LKQ+ R W D F++ +G R ++D C + R + G+ IL+ D LV+ ++V + K ++ F MKDLG +++LG+ + RDR + I +SQ +Y+++VL+R + + TP+ ++ +S E + V Y VG+LM A TRPDIA AV +R M DP +E ++ RI + +R TS S + + D + ++ S T TL V + + S TEAEY+AA + KEA++ + L +G + T + SA+++++ H RTKHIGV++H +RE V EG + ++ + T D+LAD++T ++ K
Sbjct: 541 GKRIKCLRTDNGGEYTDGDFLAFCKQEGITRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAGLAKSFWAEAAKTACYVINRSPSTAIGLKTPMEMWKGKPGDYSSLRVFGCPVYVMYNSQERTKLDPKSRRCTFLGYADNVKGYRLWDPTARKIFVSRDVIFVENELQK----EQKNDGTT---------KETATVEIEEKSGEENSEAEPXXXXXXXXXXXDAEPRRTTRQIRKPSWHSEYVMASHDAYCLLSEDGEPSTFHEAVNGSDASLWMAAMQEEIEALHRNNTWELVE---LPKGRKAIGNKWVFKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRIVLAMCAAFELHLEQLDVKTAFLHGELEEEIYMLQPEGFEEKEREN-LVCRLTKSLYGLKQAPRCWYKRFDSFIMSLGYNRLSSDHCTYYKRFDDGDFIILLLYVDDMLVVGPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLQKVLRRFNMQDYNPISTPLPVNYKLSSSMIPSSEAERMEMSRV-----PYASAVGSLMYAMICTRPDIAQAVGTVSRFMADPGKEHWNAVKRI--LRYIRGTSGAALCFGGSEFTIRGYVDSDFAGDLDKRKSTTGYVF--TLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWTQRLLEELGHKQQKITVYCDSPSALHIARNPAFHSRTKHIGVQYHFVREVVEEGSVNMQKIHTKDNLADVMTKPINSDK 1292
BLAST of mRNA_H-paniculata_contig1977.5030.1 vs. uniprot
Match: A0A438JDY0_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JDY0_VITVI) HSP 1 Score: 322 bits (825), Expect = 4.840e-95 Identity = 244/772 (31.61%), Postives = 385/772 (49.87%), Query Frame = 1
Query: 25 GLQMKRLRSKQGREFTGEEFRQFCAENSIKQEFSVAYTPQQNGVAERSWRTVFETTRSEMIIANMGCRYWVEAARAAVYCLNRASTRPHNGGLPHEKWHVTTPKLDHLRVFGCTAYVMFQSQQRRKLDDKTWLRVFLGHYEDSPSYRIYRPENKSVQLSRNVRFDEENFVTAHHGQLEHDGTRDIEGLFSAPSV---TPAVTRS--RARGEE-----TSRILKRARARENREENSGSAARVAKVEDTSNPTRAVSEEEPKCAAAALKNQEADKWRAAM-----TFVKTWTWESEDRGRLPVGWKAISTKWIIKRKLKEEGSVPRYKARLVAQSFSQVGGEDFFETSALVAHMSTLHTVFSLATKHDFELEGMGVDVAYLNAPMEEELFVKLPSEFFPFSRDIPFVRRLRKRPYDLKQSSRNWNNTLDDFLVGIGLQRSTTDPCL*FSRDEGGETDILVAIYVDYLVIARRH-EKVDKFKDNISWRFTMKDLGSLSRVLGIDVRRDRPNGTISISQGDYIREVLKRHVFDECRGVPTPVEERVEILASESADKPREPNPIGAVLGNSTEYRGMVGTLMCASTGTRPDIAYAVHQEARRMEDPCREDFSTCNRIFVIAVLRLTSAL---RSAVRVMVTIWKDSLMPIGRKMSRTESPQRDTLPS*TVVR*VGVLGSNS*SCTEAEYIAAGEVGKEAVYLRDLQGSIGFGCRGSTTLLEDKSAINLSKGSDTHCRTKHIGVRWHGIREWVREGILALKYVQTGDHLADILTTGLS 2283
GL++K LRS G E+ F ++CA I+ E ++ TPQQNGVAER RT+ E RS + A + +W +A A Y +NR + P LP E W K HL+VFGC +YV S R KLD K+ + F+G+ ++ YR + +N+ + SRNV F+E+ + G+L T D+ + S +T S + RGEE S++ R E R +S + + N EP+C AL+++ + KW AM + + TWE + LPVG KA+ KW+ + + +GS RYKARLV + F Q G D+ E + V MST+ V + + LE + V A+L+ +EE+L++ P F ++ V +LRK Y LKQ+ R W D+F+ IG +R D C + I++ +YVD ++IA EK++ K +S +F MKDLG+ ++LG+ + RD+ NGT+ +SQ +Y+++VL R +E + V TP+ ++ +S E + + V Y +G+LM A TRPDIA+AV +R M P ++ + I L + L +++++ + D I + S T TL + + + S TEAEY+AA E GKE ++L +G + +SAI L+K S H ++KHI +++H IR V ++ L+ + + AD+LT G++
Sbjct: 7 GLKVKCLRSDNGGEYIDGGFNEYCAAQGIRMEKTIPGTPQQNGVAERMNRTLNERARSMRLHAGLPKTFWADAVSTAAYLINRGPSVPMEFRLPEEVWSGKEVKFSHLKVFGCVSYVHIDSDARSKLDAKSKICFFIGYGDEKFGYRFWDEQNRKIIRSRNVIFNEQ---VMYKGRLTV--TSDVTEIDQKKSEFVNLDELTESTVQKRGEEDKENVNSKVDLRTPVVEVRR-SSRNIRPPQRYSPVLNYLLLTDGGEPECYNEALQDENSSKWELAMKDEMDSLLGNQTWELTE---LPVGKKALHNKWVYRINNEHDGS-KRYKARLVVKGFQQKEGIDYTEIFSPVVKMSTIRLVLGMVAVENLHLEQLDVKTAFLHGDLEEDLYMIQPEGFIVQGQEN-LVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEADHCCYVKSFDNSY--IILLLYVDDMLIAGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHMSKV-----PYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLDTCLCFTGASLKLQGYVDADFAGDIDSRKSTTGFVF--TLGGTAISWTSNLQKIVTLSTTEAEYVAATEAGKEMIWLHGFLDELGKKQEMGILHSDSQSAIFLAKNSAFHSKSKHIQIKYHFIRYLVEFKLVILEKICGSKNPADMLTKGVT 758
BLAST of mRNA_H-paniculata_contig1977.5030.1 vs. uniprot
Match: A0A438E432_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=4 Tax=Vitis vinifera TaxID=29760 RepID=A0A438E432_VITVI) HSP 1 Score: 330 bits (845), Expect = 8.830e-95 Identity = 241/788 (30.58%), Postives = 381/788 (48.35%), Query Frame = 1
Query: 10 IAKANGLQMKRLRSKQGREFTGEEFRQFCAENSIKQEFSVAYTPQQNGVAERSWRTVFETTRSEMIIANMGCRYWVEAARAAVYCLNRASTRPHNGGLPHEKWHVTTPKLDHLRVFGCTAYVMFQSQQRRKLDDKTWLRVFLGHYEDSPSYRIYRPENKSVQLSRNVRFDEENFV----------TAHHGQLEHDG-----TRDIEGLFSAP-------SVTPAVTRSRARGEETSRILKRARARENREENSGSAARVAKVEDTSNPTRAVSEEEPKCAAAALKNQEADKWRAAMTFVKTWTWESE--DRGRLPVGWKAISTKWIIKRKLKEEGSVPRYKARLVAQSFSQVGGEDFFETSALVAHMSTLHTVFSLATKHDFELEGMGVDVAYLNAPMEEELFVKLPSEFFPFSRDIPFVRRLRKRPYDLKQSSRNWNNTLDDFLVGIGLQRSTTDPCL*FSRDEGGETDILVAIYVDYLVIARRHEKVDKFKDNISWRFTMKDLGSLSRVLGIDVRRDRPNGTISISQGDYIREVLKRHVFDECRGVPTPVEERVEILASESADKPREPNPIGAVLGNSTEYRGMVGTLMCASTGTRPDIAYAVHQEARRMEDPCREDFSTCNRIFVIAVLRLTSALRSAV---RVMVTIWKDSLMPIGRKMSRTESPQRDTLPS*TVVR*VGVLGSNS*SCTEAEYIAAGEVGKEAVYLRDLQGSIGFGCRGSTTLLEDKSAINLSKGSDTHCRTKHIGVRWHGIREWVREGILALKYVQTGDHLADILTTGLSRVK 2292
+ + G Q+K +RS G E+ G F Q+C + I+ E +V TPQQNGVAER RT+ E R + + + +W EA R AV +N + + P NG +P + W DHLRVFGC A+V +R KLD K +F+G+ + YR+Y P +K V SR+V F E+ + ++ + ++ D DI+ P V P + ++ E RE + S+ + D EP+ LK++ +W AM E+ D + P G K + KW+ +RK S PR+KARLV + F Q G DF E + V MS++ TV +A + E+E + V A+L+ +EEE++++ P F D V +L+K Y LKQ+ R W D F+ G R+T D C+ + G IL+ D L++ + K+ K K +S F MKDLG ++LGI + R+R +G I +SQ +Y+++VL+R D+ + V P+ ++ +S+ E N + + Y +G+LM A TRPDIA+AV +R M +P +E ++ +++ L+ TS + ++ + DS M ++ S T V + + S TEAE+IA E KE ++L+ +G + +SAI+LSK S H R+KHI VR+H IR+ + + +L L+ V T D+ +D+LT L++ K
Sbjct: 403 VERETGRQLKCVRSDNGGEYIGP-FDQYCTNHGIRHEKTVKKTPQQNGVAERMNRTILERVRCLLSHSKLPRSFWGEAMRTAVDLINLSPSVPLNGDVPEKVWTGKEVSYDHLRVFGCRAFVHIPKDERSKLDPKAKQCIFIGYGHEDFGYRLYDPVDKKVVRSRDVVFLEDQTIEDIDKLESAESSTNDLVDLDPLNPPVVHDIDEEVQTPHDDAAEDDVEPEIEGEQSPQEPLXXXXXXRSTREKQPSKKYSSNEYVMISDQG---------EPETYQEVLKHENKTEWLKAMKEEMKSLNENHTYDLVKPPKGKKILKNKWVFRRKNDGNSSQPRFKARLVVKGFDQRKGVDFDEIFSPVVKMSSIRTVLGIAASMNLEVEQLDVKTAFLHGDLEEEIYMEQPEGFIDKGND-QLVCKLKKSLYGLKQAPRQWYRKFDSFMTEHGYSRTTLDHCVFVKKYPDGNFIILLLYVDDMLIMGQDMSKISKLKSELSKSFAMKDLGPAKQILGIRIVRNRSHGLIWLSQENYVKKVLERFNMDKAKPVNCPLAGHFKLSSSQCPTSDEEKNEMQKI-----PYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSNPGKEHWAAVK--WILRYLQGTSKMSLCFGKGEPILDGFTDSDMAGDVDSRKSTSGYLITFAGGAVTWQSRLQKCVALSTTEAEFIAITEACKELLWLKKFLQELGLKQERYVLHCDSQSAIHLSKNSSFHSRSKHIDVRYHWIRDVLNDKLLQLEKVHTDDNTSDMLTKALTKDK 1172
BLAST of mRNA_H-paniculata_contig1977.5030.1 vs. uniprot
Match: A0A1J3IBS4_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3IBS4_NOCCA) HSP 1 Score: 323 bits (828), Expect = 2.490e-94 Identity = 246/779 (31.58%), Postives = 378/779 (48.52%), Query Frame = 1
Query: 10 IAKANGLQMKRLRSKQGREFTGEEFRQFCAENSIKQEFSVAYTPQQNGVAERSWRTVFETTRSEMIIANMGCRYWVEAARAAVYCLNRASTRPHNGGLPHEKWHVTTPKLDHLRVFGCTAYVMFQSQQRRKLDDKTWLRVFLGHYEDSPSYRIYRPENKSVQLSRNVRFDEEN---FVTAHHGQLEHD--GTRDIEGLFSAPSVTPAVTRSRA-RGEETSRILKRARARENREENSGSAARVAKVED---TSNPTRAVSEEEPKCAAAALKNQEADKWRAAM-----TFVKTWTWESEDRGRLPVGWKAISTKWIIKRKLKEEGSVPRYKARLVAQSFSQVGGEDFFETSALVAHMSTLHTVFSLATKHDFELEGMGVDVAYLNAPMEEELFVKLPSEFFPFSRDIPFVRRLRKRPYDLKQSSRNWNNTLDDFLVGIGLQRSTTDPCL*FSRDEGGETDILVAIYVDYLV-IARRHEKVDKFKDNISWRFTMKDLGSLSRVLGIDVRRDRPNGTISISQGDYIREVLKRHVFDECRGVPTPVEERVEILASESADKPREPNPIGAVLGNSTEYRGMVGTLMCASTGTRPDIAYAVHQEARRMEDPCREDFSTCNRI--FVIAVLRLTSALRSAVRVMVTIWKDSLMPIGRKMSRTESPQRDTLPS*TVVR*VGVLGSNS*SCTEAEYIAAGEVGKEAVYLRDLQGSIGFGCRGSTTLL-EDKSAINLSKGSDTHCRTKHIGVRWHGIREWVREGILALKYVQTGDHLADILTTGLSRVK 2292
+ K + Q+K LR+ +G EFT EF +FC I E + AYTP+QNGVAER RTV E RS + N+ ++W E+ R AVY LN + T+ P+E W P + HLRVFG AY + + R+KLDDK+ +FLG+ S YR+Y P + + SRNV FDEE +G+LE D + + +P + A T + + N + S + +V+ TS+PT + E + WR AM + K TW+ + LP G +I KW+ K K +GS+ +YKARLV + ++Q G D+ ET + VA T+ T+ +L + + V A+LN + EE++V P F ++ FV +L K Y LKQ+ R W N +D F V G +RS ++P L + G+ ++V +YVD L+ + V FKD++ +F M DLG L LG++V++ I +SQ Y ++L+R C TP+ ++ + K ++T +R +VG L+ T TRPDI++AV +R M P R+ F R+ ++ A + + + DS + ++ S L S V + S +EAEY AA +AV+LR + + +TT+ ++K+ I ++K H RTKHI ++ H IR+ V EG +AL+Y T + AD+LT LS+ K
Sbjct: 132 VEKQSEQQLKVLRTDRGGEFTSTEFNKFCESEGIHHELTTAYTPEQNGVAERKNRTVVEMARSMLKQKNLPNQFWAESVRTAVYLLNISPTKAVLNRTPYEAWCGRKPGVSHLRVFGSIAYSLIDAHNRKKLDDKSEKCIFLGYSSQSKGYRLYNPVSGKIIESRNVTFDEETVWRLREGDNGELEEIVVDNNDEQVVSESPVGSEANTPTNSVPNSXXXXXXXXXXXXSNAPQKFRSLQEIYEVQHAFFTSDPTMFT------------EAAEKEDWRKAMDEEITSIEKNSTWQLVE---LPEGKHSIGVKWVFKTKYHADGSIQKYKARLVVKGYAQEYGVDYEETFSPVARFDTVRTLLALGAHMHWPIYQFDVKSAFLNGELLEEVYVDQPEGFVVRGKE-GFVYKLHKALYGLKQAPRAWYNKIDLFFVESGFERSRSEPTLYIKKQSEGDI-LIVCLYVDDLIYMGSCASLVADFKDSMMKKFEMSDLGLLHFFLGLEVKQVEDG--IFVSQQKYAMDLLRRFNMTNCNVEETPMNINEKLQKDDGTGK-----------ADATRFRSLVGGLIYL-THTRPDISFAVSAISRFMHCPTRQHFGAAKRLLRYIAATTEFGLWYNTVSEFELVGFTDSDWAGCVQDRKSTSGHVFNLGSGAVCWSSKKQNVTALSSSEAEYTAATSAACQAVWLRRILEDVKQEQLKATTIFCDNKATIAMTKNPAYHGRTKHISIKVHFIRDLVNEGSVALEYCSTNEQRADVLTKALSKSK 879
BLAST of mRNA_H-paniculata_contig1977.5030.1 vs. uniprot
Match: A0A6D2HJZ4_9BRAS (Integrase catalytic domain-containing protein n=3 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2HJZ4_9BRAS) HSP 1 Score: 329 bits (844), Expect = 4.860e-94 Identity = 250/819 (30.53%), Postives = 388/819 (47.37%), Query Frame = 1
Query: 10 IAKANGLQMKRLRSKQGREFTGEEFRQFCAENSIKQEFSVAYTPQQNGVAERSWRTVFETTRSEMIIANMGCRYWVEAARAAVYCLNRASTRPHNGGLPHEKWHVTTPKLDHLRVFGCTAYVMFQSQQRRKLDDKTWLRVFLGHYEDSPSYRIYRPENKSVQLSRNVRFDEENFV------------------------TAHHGQLE-------------------------HDGTRDIEGLFSAPSVTPAVTRSRARGEETSRILKRARARENREENSGSAARVAKVEDTSNPTRAVSEEEPKCAAAALKNQEADKWRAAM-----TFVKTWTWESEDRGRLPVGWKAISTKWIIKRKLKEEGSVPRYKARLVAQSFSQVGGEDFFETSALVAHMSTLHTVFSLATKHDFELEGMGVDVAYLNAPMEEELFVKLPSEFFPFSRDIPFVRRLRKRPYDLKQSSRNWNNTLDDFLVGIGLQRSTTDPCL*FSRDEGGETDILVAIYVD-YLVIARRHEKVDKFKDNISWRFTMKDLGSLSRVLGIDVRRDRPNGTISISQGDYIREVLKRHVFDECRGVPTPVEERVEILASESADKPREPNPIGAVLGNSTEYRGMVGTLMCASTGTRPDIAYAVHQEARRMEDPCREDFSTCNRIFVIAVLRLTSALR---SAVRVMVTIWKDSLMPIGRKMSRTESPQRDTLPS*TVVR*VGVLGSNS*SCTEAEYIAAGEVGKEAVYLRDLQGSIGFGCRGSTTLLEDKSAINLSKGSDTHCRTKHIGVRWHGIREWVREGILALKYVQTGDHLADILTTGLSRVK 2292
+ + G ++K +RS G E++G F +C E+ I+ +F+ TPQ NG+AER RT+ E R + + + +W EA V+ LN + + P NG +P W DHLRVFGC A+V +R KL+ K+ VF+G+ +D YR Y P K + SR+V F E+ + T+ HGQ+E HDGT E L PAV RS + ++R D S EP+ AL+++ DKW AM +F + T+ D +LP G KA+ KW+ + K ++ +PRY+ARLV + + Q G DF E + V MS++ V LA D E+E M V A+L+ +EEE+++ P F ++ V RL+K Y LKQ+ R W + G + +T+D C+ F + G + I++ +YVD L++ R ++ + K ++S F MKDLG ++LG+ + RDR I +SQ YI +VL+R D+ + V TP+ + + +S E + V Y VG+LM A TRPD+A+AV +R + +P R+ ++ +++ LR TS+L+ + ++ + DS M ++ S T V + + S TEAE+IAA E KE +++++ IGF L + +SAI L K S H R+KHI R+H IR+ V + L+ V T D+ AD++T L R K
Sbjct: 526 VERQTGKKLKCIRSDNGGEYSGP-FDAYCKEHGIRHQFTPPKTPQLNGLAERMNRTIVERVRCLISQSGLSMTFWGEALSTVVHVLNLSPSSPLNGDIPERVWTGKDVSYDHLRVFGCKAFVHIPKDERSKLEMKSRQCVFIGYGQDEFGYRFYDPVEKKLVRSRDVVFMEDQTIKDIDKSGNPTQSFESLIGPEVAPSTSVHGQVEGEVHSDTPNADAPAHDEGIGGHDDDHDGTPTTENL-------PAVRRSERGPKPSTRY------------------------DPSEYVLLTDGGEPESFMEALEDEHKDKWFGAMGEEMDSFEENHTF---DLVKLPKGKKALLNKWVYRIKHEDTSLLPRYRARLVVKGYGQKKGVDFDEIFSPVVKMSSIRVVLGLAASLDLEVEQMDVKAAFLHGDLEEEIYMVQPEGFVKKGKE-DLVCRLKKSLYGLKQAPRQWYKKFKSVMGEHGYKETTSDHCV-FVQVFGDDDFIILLLYVDDMLIVGRNVSRIQELKKHLSQSFAMKDLGPAKQILGMRIVRDRGERLIHLSQEKYIEKVLRRFHMDKSKVVSTPLAAHFRLSSQQSPSTELEKQDMARV-----PYASAVGSLMYAMVCTRPDLAHAVGVVSRFLSNPGRDHWTAVK--WILRYLRGTSSLKLTFGGTKPLLVSYTDSDMSGDVDSRKSTSGYLVTFAGGAVAWQSRLQKCVALSTTEAEFIAATEACKEVLWMKNFLADIGFKQDKYVLLCDSQSAICLGKNSTFHSRSKHIDRRYHWIRDVVASKEVELEKVHTDDNGADMMTKSLPRWK 1300
BLAST of mRNA_H-paniculata_contig1977.5030.1 vs. uniprot
Match: Q6BCY1_IPOBA (Gag-Pol n=1 Tax=Ipomoea batatas TaxID=4120 RepID=Q6BCY1_IPOBA) HSP 1 Score: 328 bits (842), Expect = 7.810e-94 Identity = 240/771 (31.13%), Postives = 378/771 (49.03%), Query Frame = 1
Query: 22 NGLQMKRLRSKQGREFTGEEFRQFCAENSIKQEFSVAYTPQQNGVAERSWRTVFETTRSEMIIANMGCRYWVEAARAAVYCLNRASTRPHNGGLPHEKWHVTTPKLDHLRVFGCTAYVMFQSQQRRKLDDKTWLRVFLGHYEDSPSYRIYRPENKSVQLSRNVRFDEENFVTAH---HGQLEHDGTRDIEGLFSAPSVTPAVTRSR------ARGEETSRILKRARARENREEN---SGSAARVAKVEDTSNPTRAVSEEEPKCAAAALKNQEADKWRAAM-----TFVKTWTWESEDRGRLPVGWKAISTKWIIKRKLKEEGSVPRYKARLVAQSFSQVGGEDFFETSALVAHMSTLHTVFSLATKHDFELEGMGVDVAYLNAPMEEELFVKLPSEFFPFSRDIPFVRRLRKRPYDLKQSSRNWNNTLDDFLVGIGLQRSTTDPCL*FSRDEGGETDILVAIYVDYLVIARRH-EKVDKFKDNISWRFTMKDLGSLSRVLGIDVRRDRPNGTISISQGDYIREVLKRHVFDECRGVPTPVEERVEILASESADKPREPNPIGAVLGNSTEYRGMVGTLMCASTGTRPDIAYAVHQEARRMEDPCREDFSTCNRIFVIAVLRLTSALR---SAVRVMVTIWKDSLMPIGRKMSRTESPQRDTLPS*TVVR*VGVLGSNS*SCTEAEYIAAGEVGKEAVYLRDLQGSIGFGCRGSTTLLEDKSAINLSKGSDTHCRTKHIGVRWHGIREWVREGILALKYVQTGDHLADILT 2271
+G ++K R+ G E+T EEF FC + IK++F+VAYTPQQNGVAER RT+ E TR+ + A + +W EA A Y +NRA + P E W +L +FG Y M+ +Q+ KLD K+ FLG+ + YR++ P V +SR+V F E+ + E T I + G T+R R + R + G+ A ED EP A+ + + +W AAM K TW D LP G K I KW+ K K + V RY+ARLV + ++Q G DF E + V ++T+ V ++ + LE + V A+L+ +EEE+++ P E F + V RL K Y LKQ+ R W D F++ +G R DPC F R G + +++ +YVD +++A + + +D+ K ++ F MKDLG +++LG+ + RDR N I +SQ +Y++++L R +C+ + TP+ +++ +S S N G + + Y VG+LM A TRPDIA AV +R M +P RE ++ RI + ++ TS + ++ + DS S++ + + V + + S TEAEY+AA + KEA++L+ L +G + + +SA++L++ H RTKHI V++H IRE V+EG + L+ + T D++AD LT
Sbjct: 530 SGKKIKCFRTDNGGEYTSEEFDDFCKKEGIKRQFTVAYTPQQNGVAERMNRTLLERTRAMLRAAGLEKSFWAEAVNTACYLVNRAPSTAIELKTPMEMWTGKPVDYSNLHIFGSIVYAMYNAQEITKLDPKSRKCRFLGYADGVKGYRLWDPTAHKVVISRDVIFVEDRLQRGEVDDSTEKEKPETTQIXXXXXXXXXXXXXXXXXXXXXXXSSGAPTTRQSDREKRRPTWHSDYVMEGNVAYCLLTEDG----------EPSTFQEAINSSDVSQWTAAMQEEIEALHKNNTW---DLVPLPQGRKPIGNKWVFKIKRNGDDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRVVLAMCATFNLHLEQLDVKTAFLHGDLEEEIYMLQP-EGFEDKENQNLVCRLNKSLYGLKQAPRCWYKRFDSFIMCLGYNRLNADPCAYFKRF-GKDNFVILLLYVDDMLVAGPNKDHIDELKAQLAREFEMKDLGPANKILGMQIHRDRGNRKIWLSQKNYLKKILSRFSMQDCKSISTPLPINLKVSSSMSPS-----NEEGRMEMSRVPYASAVGSLMFAMICTRPDIAQAVGVVSRYMANPGREHWNCVKRI--LRYIKGTSDVALCYGGSDFIINGYVDSDYAGDLDKSKSTTGYVFKVAGGAVSWVSKLQAVVATSTTEAEYVAATQASKEAIWLKMLLEELGHKQEFVSLFCDSQSALHLARNPAFHSRTKHIRVQYHFIREKVKEGTVDLQKIHTADNVADFLT 1278 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1977.5030.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1977.5030.1 >prot_H-paniculata_contig1977.5030.1 ID=prot_H-paniculata_contig1977.5030.1|Name=mRNA_H-paniculata_contig1977.5030.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=173bp MKDLGSLSRVLGIDVRRDRPNGTISISQGDYIREVLKRHVFDECRGVPTPback to top mRNA from alignment at H-paniculata_contig1977:4564..7136+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1977.5030.1 ID=mRNA_H-paniculata_contig1977.5030.1|Name=mRNA_H-paniculata_contig1977.5030.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2573bp|location=Sequence derived from alignment at H-paniculata_contig1977:4564..7136+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1977:4564..7136+ >mRNA_H-paniculata_contig1977.5030.1 ID=mRNA_H-paniculata_contig1977.5030.1|Name=mRNA_H-paniculata_contig1977.5030.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1038bp|location=Sequence derived from alignment at H-paniculata_contig1977:4564..7136+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |