prot_H-paniculata_contig1977.5030.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1977.5030.1 vs. uniprot
Match: A0A1J3IYK5_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3IYK5_NOCCA) HSP 1 Score: 85.1 bits (209), Expect = 2.940e-16 Identity = 55/155 (35.48%), Postives = 79/155 (50.97%), Query Frame = 0
Query: 1 MKDLGSLSRVLGIDVRRDRPNGTISISQGDYIREVLKRHVFDECRGVPTPVEERVEILASESADKPREPNPIGAVLGNSTEYRGMVGTLMCASTGTRPDIAYAVHQEARRMEDPCREDFSTCNRIFVIAVLRLTSALRSAVRVMVTIWKDSLMPI 155
MKD+G SR+LG+D+ RDR GT+ +SQ YI +VLK E + TP+ + + ++ E AV T Y VG+LM A G+RPDIAYAV +R M +P R+ ++ AV + LR + + +T KD I
Sbjct: 115 MKDMGKASRILGMDIIRDRERGTLQLSQESYIEKVLKTFGMTEAKPTTTPLATHFRLKSLTKDERKEE-----AVHMEDTPYASAVGSLMYAMIGSRPDIAYAVGVISRFMSNPGRDHWT--------AVKWVLRYLRGSSKASLTFTKDKSFSI 256
BLAST of mRNA_H-paniculata_contig1977.5030.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS) HSP 1 Score: 84.7 bits (208), Expect = 6.560e-16 Identity = 46/125 (36.80%), Postives = 73/125 (58.40%), Query Frame = 0
Query: 1 MKDLGSLSRVLGIDVRRDRPNGTISISQGDYIREVLKRHVFDECRGVPTPVEERVEILASESADKPREPNPIGAVLGNSTEYRGMVGTLMCASTGTRPDIAYAVHQEARRMEDPCREDFSTCNRI 125
+KDLG +++GI+++RDR NGTIS+SQ YI VL R R V TP++ V IL + D +P +G Y+ ++G+L+ A+ GTRPDI++AV + + +P E ++ R+
Sbjct: 1100 VKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTRFGMQNARPVSTPLDPNV-ILKKRTDDLVADPAMVGG-------YQSVIGSLLYAARGTRPDISHAVQELGQFASNPGPEHWTALKRV 1216
BLAST of mRNA_H-paniculata_contig1977.5030.1 vs. uniprot
Match: A0A6D2JMB2_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JMB2_9BRAS) HSP 1 Score: 83.2 bits (204), Expect = 2.260e-15 Identity = 46/120 (38.33%), Postives = 68/120 (56.67%), Query Frame = 0
Query: 1 MKDLGSLSRVLGIDVRRDRPNGTISISQGDYIREVLKRHVFDECRGVPTPVEERVEILASESADKPREPNPIGAVLGNSTEYRGMVGTLMCASTGTRPDIAYAVHQEARRMEDPCREDFS 120
MKDLG SR+LG+D+ RDR GT+ +SQ YI +VLK + + TP+ ++ + A++ E V + Y VG+LM A G+RPD+AYAV +R M +P RE ++
Sbjct: 1160 MKDLGKASRILGMDIIRDREKGTLKLSQESYIEKVLKAFDMADAKSTTTPLATHFKLKSLTKAERKEE-----VVHMENKPYASAVGSLMYAMIGSRPDLAYAVGVISRFMSNPGREHWT 1274
BLAST of mRNA_H-paniculata_contig1977.5030.1 vs. uniprot
Match: A0A6D2IS22_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2IS22_9BRAS) HSP 1 Score: 82.8 bits (203), Expect = 2.850e-15 Identity = 54/158 (34.18%), Postives = 83/158 (52.53%), Query Frame = 0
Query: 1 MKDLGSLSRVLGIDVRRDRPNGTISISQGDYIREVLKRHVFDECRGVPTPVEERVEILA---SESADKPREPNPIGAVLGNSTEYRGMVGTLMCASTGTRPDIAYAVHQEARRMEDPCREDFSTCNRIFVIAVLRLTSALRSAVRVMVTIWKDSLMPI 155
MKDLG R+LG+D+ RD G + +SQ Y++++LK +CR V TP+ +++ A + ++ RE + I Y +VG+LM A G+RPD+AYAV +R M P RE +S AV + L+ A +T KDS + +
Sbjct: 471 MKDLGPARRILGMDIIRDNKRGVLVLSQEAYLQKLLKTFSMWDCREVQTPLGSHIKLQALTPQQEVEQAREMDKI--------PYASVVGSLMYAMVGSRPDLAYAVGMVSRYMGKPGREHWS--------AVQWILRYLKGAASKCLTFTKDSELKV 612
BLAST of mRNA_H-paniculata_contig1977.5030.1 vs. uniprot
Match: UPI00142E19AD (uncharacterized protein LOC103874474 n=1 Tax=Brassica campestris TaxID=3711 RepID=UPI00142E19AD) HSP 1 Score: 82.8 bits (203), Expect = 3.060e-15 Identity = 43/114 (37.72%), Postives = 66/114 (57.89%), Query Frame = 0
Query: 1 MKDLGSLSRVLGIDVRRDRPNGTISISQGDYIREVLKRHVFDECRGVPTPVEERVEILASESADKPREPNPIGAVLGNSTEYRGMVGTLMCASTGTRPDIAYAVHQEARRMEDP 114
MKD+G SR+LGID++RDR T+ + Q YI++VLKR E + V TP+ ++ + ++AD+ + + Y VG++M A GTRPD+AYA+ +R M P
Sbjct: 1061 MKDMGPASRILGIDIKRDREQDTLKLCQSGYIQKVLKRFKMSESKAVATPMGSHFKLASVKNADERIDTEKV--------PYLSAVGSVMYAMVGTRPDVAYALGLVSRFMSKP 1166
BLAST of mRNA_H-paniculata_contig1977.5030.1 vs. uniprot
Match: A0A1J3DQ82_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3DQ82_NOCCA) HSP 1 Score: 80.9 bits (198), Expect = 4.970e-15 Identity = 57/155 (36.77%), Postives = 80/155 (51.61%), Query Frame = 0
Query: 1 MKDLGSLSRVLGIDVRRDRPNGTISISQGDYIREVLKRHVFDECRGVPTPVEERVEILASESADKPREPNPIGAVLGNSTEYRGMVGTLMCASTGTRPDIAYAVHQEARRMEDPCREDFSTCNRIFVIAVLRLTSALRSAVRVMVTIWKDSLMPI 155
MKD+G SR+LG+D+ RDR GT+ +SQ YI +VLK E + TP+ L S S D+ +E A +T VG+LM A G+RPDIAYAV +R M +P R+ ++ AV + LR + + +T KD I
Sbjct: 25 MKDMGKASRILGMDIIRDREKGTLQLSQESYIEKVLKTFGMTEAKPTSTPLATHFR-LKSLSKDERKEE----AAHMENTPNASAVGSLMYAMIGSRPDIAYAVGVISRFMSNPGRDHWT--------AVKWVLRYLRGSSKASLTFTKDKSFSI 166
BLAST of mRNA_H-paniculata_contig1977.5030.1 vs. uniprot
Match: A0A1J3I7B7_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3I7B7_NOCCA) HSP 1 Score: 81.3 bits (199), Expect = 6.360e-15 Identity = 45/120 (37.50%), Postives = 68/120 (56.67%), Query Frame = 0
Query: 1 MKDLGSLSRVLGIDVRRDRPNGTISISQGDYIREVLKRHVFDECRGVPTPVEERVEILASESADKPREPNPIGAVLGNSTEYRGMVGTLMCASTGTRPDIAYAVHQEARRMEDPCREDFS 120
MKDLG SR+LG+D+ RDR GT+ +SQ +YI +VLK E + TP+ + + ++ E A+ T Y VG+LM A G+RPD+A+AV +R M +P R+ ++
Sbjct: 96 MKDLGKASRILGMDIIRDREKGTLKLSQENYIEKVLKAFGMTEAKPTITPLATHFRLKSLTKDERKEE-----AIHMEGTPYASAVGSLMYAMIGSRPDLAFAVGVISRFMSNPGRDHWT 210
BLAST of mRNA_H-paniculata_contig1977.5030.1 vs. uniprot
Match: A0A2U1MW82_ARTAN (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1MW82_ARTAN) HSP 1 Score: 81.6 bits (200), Expect = 7.660e-15 Identity = 43/116 (37.07%), Postives = 66/116 (56.90%), Query Frame = 0
Query: 1 MKDLGSLSRVLGIDVRRDRPNGTISISQGDYIREVLKRHVFDECRGVPTPVEERVEILASESADKPREPNPIGAVLGNSTEYRGMVGTLMCASTGTRPDIAYAVHQEARRMEDPCR 116
MKDLG+ ++LG+++RRDR G +++SQ DYI +VLKR C+ + TP+ ++ + E + + V Y VG+LM A TRPD+A+AV +R M +P R
Sbjct: 990 MKDLGAAKKILGMEIRRDRKMGKLTLSQSDYISKVLKRFNMSNCKPILTPLAPHFKLSSHECPKSEEDKEDMSLV-----PYSSAVGSLMYAMVCTRPDLAHAVSVVSRYMHNPGR 1100
BLAST of mRNA_H-paniculata_contig1977.5030.1 vs. uniprot
Match: A0A293MM55_ORNER (Reverse transcriptase, gag, polyprotein (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293MM55_ORNER) HSP 1 Score: 81.6 bits (200), Expect = 7.670e-15 Identity = 46/105 (43.81%), Postives = 63/105 (60.00%), Query Frame = 0
Query: 1 MKDLGSLSRVLGIDVRRDRPNGTISISQGDYIREVLKRHVFDECRGVPTPVEERVEILASESADKPREPNPIGAVLGNSTEYRGMVGTLMCASTGTRPDIAYAVH 105
+KDLG +LG++V+RD+ GTISISQ YI EVLKR+ + C+ V TP+E L E + RE G Y+ ++G+LM GTRPDIA+AV+
Sbjct: 1053 LKDLGEPKYILGLEVKRDKTQGTISISQKKYIGEVLKRYGMENCKPVSTPIEPG---LTQEESTSQREEQLQGI------PYQSLIGSLMYLVQGTRPDIAFAVN 1148
BLAST of mRNA_H-paniculata_contig1977.5030.1 vs. uniprot
Match: A0A6A3BLN2_HIBSY (Cytochrome P450 71A9-like n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3BLN2_HIBSY) HSP 1 Score: 81.3 bits (199), Expect = 1.040e-14 Identity = 45/125 (36.00%), Postives = 72/125 (57.60%), Query Frame = 0
Query: 1 MKDLGSLSRVLGIDVRRDRPNGTISISQGDYIREVLKRHVFDECRGVPTPVEERVEILASESADKPREPNPIGAVLGNSTEYRGMVGTLMCASTGTRPDIAYAVHQEARRMEDPCREDFSTCNRI 125
MKDLGS++++LG+ + RDR N I +SQ +Y++++L R +C+ + TP+ ++ +S S E + V Y VG+LM + TRPDIA AV +R M +P +E ++T RI
Sbjct: 780 MKDLGSVNKILGMQIHRDRSNRKIWLSQKNYLKKILSRFNMKDCKPISTPLPINFKLSSSMSPSSEEEMMEMSRV-----PYASAVGSLMFSMICTRPDIAQAVGVVSRYMANPGKEHWNTMKRI 899 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1977.5030.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig1977.5030.1 ID=prot_H-paniculata_contig1977.5030.1|Name=mRNA_H-paniculata_contig1977.5030.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=173bpback to top |